| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608588
Identifier: 86608588
GI number: 86608588
Start: 1146761
End: 1147090
Strand: Reverse
Name: 86608588
Synonym: CYB_1110
Alternate gene names: NA
Gene position: 1147090-1146761 (Counterclockwise)
Preceding gene: 86608589
Following gene: 86608587
Centisome position: 37.65
GC content: 55.76
Gene sequence:
>330_bases GTGGAGGGATCCCAGGCCATGAGCAAATCTGAGCTGTTGCGAGAGATTCTGGGGCCACTGTTGGAGGACTACCGCTACTG GTTTGAGCGTTCTCGCCGCTTTTTGCAGGAAGAGACCCTGGAATTGATCAGCCCAGAAGAGCAGCAGTCCTTGCTGGAAG AGGTTTTGGCTGCCCAGGCGGAGCTACAGGTAGCCAAAGCGCTTTATCAGGCCTCTGATCAAGAGGTTGGCATCGACCCT GGGCTGATGGCAAAATGGCATCGCCTGCTGATGAAATGTGCCGAATTGGGCCGTCAATTTCGCCAGATTCACCCCTCCCC CGACCTGTAA
Upstream 100 bases:
>100_bases TCGAAGCCCTGATGCTGGAGATGGAAGCCTACCTGGAATCCCGCTCTCCCGTGGCGAGAGAAGGTTAAGTTCTGCTAAGA TTTTTTCATCCAAACCAGTT
Downstream 100 bases:
>100_bases TGCTGCAGATTCTCTACCTCATCGCTTTTGTGGCCATTGCCTTTTTGGCCCTGCGCAACTTGGTTGCCAATGTCATCACG TTGGGCGTGGAAGAGCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MEGSQAMSKSELLREILGPLLEDYRYWFERSRRFLQEETLELISPEEQQSLLEEVLAAQAELQVAKALYQASDQEVGIDP GLMAKWHRLLMKCAELGRQFRQIHPSPDL
Sequences:
>Translated_109_residues MEGSQAMSKSELLREILGPLLEDYRYWFERSRRFLQEETLELISPEEQQSLLEEVLAAQAELQVAKALYQASDQEVGIDP GLMAKWHRLLMKCAELGRQFRQIHPSPDL >Mature_109_residues MEGSQAMSKSELLREILGPLLEDYRYWFERSRRFLQEETLELISPEEQQSLLEEVLAAQAELQVAKALYQASDQEVGIDP GLMAKWHRLLMKCAELGRQFRQIHPSPDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019728 [H]
Pfam domain/function: PF10792 DUF2605 [H]
EC number: NA
Molecular weight: Translated: 12660; Mature: 12660
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGSQAMSKSELLREILGPLLEDYRYWFERSRRFLQEETLELISPEEQQSLLEEVLAAQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ELQVAKALYQASDQEVGIDPGLMAKWHRLLMKCAELGRQFRQIHPSPDL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEGSQAMSKSELLREILGPLLEDYRYWFERSRRFLQEETLELISPEEQQSLLEEVLAAQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ELQVAKALYQASDQEVGIDPGLMAKWHRLLMKCAELGRQFRQIHPSPDL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]