| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608532
Identifier: 86608532
GI number: 86608532
Start: 1090989
End: 1092098
Strand: Direct
Name: 86608532
Synonym: CYB_1054
Alternate gene names: NA
Gene position: 1090989-1092098 (Clockwise)
Preceding gene: 86608529
Following gene: 86608534
Centisome position: 35.81
GC content: 60.0
Gene sequence:
>1110_bases ATGTTTAGGGTCTCCTGTTTGGCTCATTCTCTTTTGCTACTGGGATCCCTTGGCCTGGGTTGGATAGGCGTGTCTTTTGC CCAAGCGCAGCCCTTTCAAGCGGGCGATTTGGACGGGGATGGCCGTTTGACGGTGCAGGATCTCAACCTGTTGGGGGCCT ACTTGCGGGGAGAACGGGGATTGACCGACGACCAGATCCGAGCTGCCGATGTCGACCAGGATGGACGGATCACAGAAGCC GACTGGCAAGTGTTGCAGCAGCGCATTCAGGCAGCAACGGATGTGCCCACAGGACAGGTGCAGTTGGATTCCGCCTATTC GGGACAGGTGGTGGATCGGCTGACAGGGCAGCCTTTGGCCGGGGCGGAGGTGGCCATTCCAGGGGCGGGTATTTCGGTGC GCACCGATGCCCAGGGTCGGTTTCGCCTGCCAGGGCCACTGCCGGCAGAGGAAATTTTGGTGGCGCGGCTGGAGAATTAT TTGCCCTATTCCCAAAGTACAGGCAGCGGTCAAGCCAGCGGGGATCGGCCTTGGCAACTGCAGTTGGAGCGCTGGGATCC CAACACGACTTTGGTACTGGAGGCGAATGTCATCCGCCTGGGGGATAACCAGTACTCACCGGAATCGGCTGCCGCCGGGC AATTTTTGGGCCCTGCCCAAGGGGTGGAGATGACCCGCTCTTTCACTTTGCAACGCCTGCCTTCGCGCCCACCGGTTTTG CGGATTGGATCCCTGATTGGGTTGGATACTGCCGCCGCCTATCGGGCCGGCCAATCCCGGATCCCCAGCGCCAACATGTC TCCCATGCAAGTCATCTTGAACGGGGTGGAAATCGAACAGATTCACCTGGGGGGAGATAACCTACAGATTCCCCTGCCTC TGCAACCTCTGCGCCTGGGCCTGAACACTGTTACCTTGCGCACCGGTAAAACCCTGATTGAGCCCAGCATGGTCACCCGC GGCCCCCAAGTGCTTGTTGGTATTCCCCTCTTTGGCGGATCCCTGCACATCTCGGTGCCGGTGGGAGGTGATACGGTCGT CCGGCACGGCGGAGCCTGGGTGGATCATGACGATGTGCAGTTGGCCAATTTGACATACTCCCCACCCTAA
Upstream 100 bases:
>100_bases CGGCAAAATTGCGCTCAAGAGTACTCTACACCGGCTCGGTCAACCCTGCTGCGAGGAGGTGAATTACGTTAGAACATGAA CAACTCCCAGGAGAGTTGCC
Downstream 100 bases:
>100_bases AGAGCGAGGATTCTGGTTCCTGGTTCCACGACAGCACTTACCATGTTAGGCTGCCCCTCCATGGCAGAGGTGCTTGTCTC CCCAGGCGTTCCCTCTTTCG
Product: dockerin repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MFRVSCLAHSLLLLGSLGLGWIGVSFAQAQPFQAGDLDGDGRLTVQDLNLLGAYLRGERGLTDDQIRAADVDQDGRITEA DWQVLQQRIQAATDVPTGQVQLDSAYSGQVVDRLTGQPLAGAEVAIPGAGISVRTDAQGRFRLPGPLPAEEILVARLENY LPYSQSTGSGQASGDRPWQLQLERWDPNTTLVLEANVIRLGDNQYSPESAAAGQFLGPAQGVEMTRSFTLQRLPSRPPVL RIGSLIGLDTAAAYRAGQSRIPSANMSPMQVILNGVEIEQIHLGGDNLQIPLPLQPLRLGLNTVTLRTGKTLIEPSMVTR GPQVLVGIPLFGGSLHISVPVGGDTVVRHGGAWVDHDDVQLANLTYSPP
Sequences:
>Translated_369_residues MFRVSCLAHSLLLLGSLGLGWIGVSFAQAQPFQAGDLDGDGRLTVQDLNLLGAYLRGERGLTDDQIRAADVDQDGRITEA DWQVLQQRIQAATDVPTGQVQLDSAYSGQVVDRLTGQPLAGAEVAIPGAGISVRTDAQGRFRLPGPLPAEEILVARLENY LPYSQSTGSGQASGDRPWQLQLERWDPNTTLVLEANVIRLGDNQYSPESAAAGQFLGPAQGVEMTRSFTLQRLPSRPPVL RIGSLIGLDTAAAYRAGQSRIPSANMSPMQVILNGVEIEQIHLGGDNLQIPLPLQPLRLGLNTVTLRTGKTLIEPSMVTR GPQVLVGIPLFGGSLHISVPVGGDTVVRHGGAWVDHDDVQLANLTYSPP >Mature_369_residues MFRVSCLAHSLLLLGSLGLGWIGVSFAQAQPFQAGDLDGDGRLTVQDLNLLGAYLRGERGLTDDQIRAADVDQDGRITEA DWQVLQQRIQAATDVPTGQVQLDSAYSGQVVDRLTGQPLAGAEVAIPGAGISVRTDAQGRFRLPGPLPAEEILVARLENY LPYSQSTGSGQASGDRPWQLQLERWDPNTTLVLEANVIRLGDNQYSPESAAAGQFLGPAQGVEMTRSFTLQRLPSRPPVL RIGSLIGLDTAAAYRAGQSRIPSANMSPMQVILNGVEIEQIHLGGDNLQIPLPLQPLRLGLNTVTLRTGKTLIEPSMVTR GPQVLVGIPLFGGSLHISVPVGGDTVVRHGGAWVDHDDVQLANLTYSPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39417; Mature: 39417
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRVSCLAHSLLLLGSLGLGWIGVSFAQAQPFQAGDLDGDGRLTVQDLNLLGAYLRGERG CEEHHHHHHHHHHHHCCCCHHHEEEHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCC LTDDQIRAADVDQDGRITEADWQVLQQRIQAATDVPTGQVQLDSAYSGQVVDRLTGQPLA CCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCC GAEVAIPGAGISVRTDAQGRFRLPGPLPAEEILVARLENYLPYSQSTGSGQASGDRPWQL CCEEEECCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE QLERWDPNTTLVLEANVIRLGDNQYSPESAAAGQFLGPAQGVEMTRSFTLQRLPSRPPVL EEEEECCCEEEEEEEEEEEECCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE RIGSLIGLDTAAAYRAGQSRIPSANMSPMQVILNGVEIEQIHLGGDNLQIPLPLQPLRLG EECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEECCCCHHHHCC LNTVTLRTGKTLIEPSMVTRGPQVLVGIPLFGGSLHISVPVGGDTVVRHGGAWVDHDDVQ CEEEEEECCCEEECCHHHCCCCEEEEEEEEECCEEEEEEECCCCEEEECCCCCCCCCCEE LANLTYSPP EEEEECCCC >Mature Secondary Structure MFRVSCLAHSLLLLGSLGLGWIGVSFAQAQPFQAGDLDGDGRLTVQDLNLLGAYLRGERG CEEHHHHHHHHHHHHCCCCHHHEEEHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCC LTDDQIRAADVDQDGRITEADWQVLQQRIQAATDVPTGQVQLDSAYSGQVVDRLTGQPLA CCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCC GAEVAIPGAGISVRTDAQGRFRLPGPLPAEEILVARLENYLPYSQSTGSGQASGDRPWQL CCEEEECCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE QLERWDPNTTLVLEANVIRLGDNQYSPESAAAGQFLGPAQGVEMTRSFTLQRLPSRPPVL EEEEECCCEEEEEEEEEEEECCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE RIGSLIGLDTAAAYRAGQSRIPSANMSPMQVILNGVEIEQIHLGGDNLQIPLPLQPLRLG EECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEECCCCHHHHCC LNTVTLRTGKTLIEPSMVTRGPQVLVGIPLFGGSLHISVPVGGDTVVRHGGAWVDHDDVQ CEEEEEECCCEEECCHHHCCCCEEEEEEEEECCEEEEEEECCCCEEEECCCCCCCCCCEE LANLTYSPP EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA