| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608531
Identifier: 86608531
GI number: 86608531
Start: 1090461
End: 1090823
Strand: Reverse
Name: 86608531
Synonym: CYB_1052
Alternate gene names: NA
Gene position: 1090823-1090461 (Counterclockwise)
Preceding gene: 86608533
Following gene: 86608530
Centisome position: 35.8
GC content: 54.82
Gene sequence:
>363_bases ATGGCTCGATACTCTTGCGTTACCCAGCTTGTGGGCTCAGCCGAGCAGCTCAGCGAGTCGATCCGCGCTGTTTTGGAGCG CTGCCAACTCAATATCCTCCACAACAGCCTTGATTATTGGGTGGCCGGCGAGCCTCCCGGAAAAAATCCCCACACCAAAC TGGTGACGGTGGAAGTGTTTGTGGATCGCACCCGTCAGGCTGCCGACGGCTCTGTACAGGTGACCTGCATTGCCAAAAAC GAAGAGCTGCCCCTCAGAAGCGTTAACCACTGCCAACAAACCTTTGACCGACTGAAGGCAGAGCTAGCCCAGTTGCAAAG TCAACTTCAGCTTGCTGCCCAACAAAAAGATGCCTTACGATAG
Upstream 100 bases:
>100_bases GCCGGTGTAGAGTACTCTTGAGCGCAATTTTGCCGGTTCGCCTTTGGCTGCAGGAGCCGAAAACTTAATGGTAGGATAAC CGTGGTGGCTTGCCTGTTCT
Downstream 100 bases:
>100_bases CTAGGCTGAGTTTGCTTTGATCCCATGGCGCGTCGCTGCCAACTAACCAACAAGAAACGCAACAACGCTTTTGCCATCTC CCACTCCCACCGGCGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MARYSCVTQLVGSAEQLSESIRAVLERCQLNILHNSLDYWVAGEPPGKNPHTKLVTVEVFVDRTRQAADGSVQVTCIAKN EELPLRSVNHCQQTFDRLKAELAQLQSQLQLAAQQKDALR
Sequences:
>Translated_120_residues MARYSCVTQLVGSAEQLSESIRAVLERCQLNILHNSLDYWVAGEPPGKNPHTKLVTVEVFVDRTRQAADGSVQVTCIAKN EELPLRSVNHCQQTFDRLKAELAQLQSQLQLAAQQKDALR >Mature_119_residues ARYSCVTQLVGSAEQLSESIRAVLERCQLNILHNSLDYWVAGEPPGKNPHTKLVTVEVFVDRTRQAADGSVQVTCIAKNE ELPLRSVNHCQQTFDRLKAELAQLQSQLQLAAQQKDALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13415; Mature: 13284
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYSCVTQLVGSAEQLSESIRAVLERCQLNILHNSLDYWVAGEPPGKNPHTKLVTVEVF CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEHEE VDRTRQAADGSVQVTCIAKNEELPLRSVNHCQQTFDRLKAELAQLQSQLQLAAQQKDALR EHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARYSCVTQLVGSAEQLSESIRAVLERCQLNILHNSLDYWVAGEPPGKNPHTKLVTVEVF CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEHEE VDRTRQAADGSVQVTCIAKNEELPLRSVNHCQQTFDRLKAELAQLQSQLQLAAQQKDALR EHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA