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The map label for this gene is 86608529

Identifier: 86608529

GI number: 86608529

Start: 1089414

End: 1090160

Strand: Direct

Name: 86608529

Synonym: CYB_1050

Alternate gene names: NA

Gene position: 1089414-1090160 (Clockwise)

Preceding gene: 86608527

Following gene: 86608532

Centisome position: 35.76

GC content: 57.97

Gene sequence:

>747_bases
GTGAGGAATGCTCCATCCGTGAGTGCTCCCCCTTCTCAACCCTCAGAGCCGGTTCGCATTGAAACCACGCGGGACTTGCT
GGAAGCCTTGCGTGAGGGGCGCTCCCTGGTGGGTGCCAACCTGGAGAATGCCTACCTCTCGCGGGGCTTGTTCGACCGCA
TTCAGATGCCCAAATCCAATTTGACGCGGGCTAACCTGCGCTCGATCAGCCTGCAGCAAGCCGACCTACGTCTGTGCAAC
TTTCGCCGCGCTGAGCTAGAGCGGGCCAATTTTACCGCCTCAGATCTACGGGGATCCAGCTTTAGCCAGGCTCTGGGGGA
CTACAGCAACTTTACCGCCGCCAAACTGGACAAAAGCAGCTTTCAGGGGGGCCGTTTCAGCCATTCCATCTTTCGCGAAG
CCAGCTTGGTGGCTGCTAATCTGGCGGAGGGGAACTTTTTTGCCGCCGACTTCCGCCAGGCCAACCTATCTCGCTGCAAC
CTCTCCCAGGCTGCCTTGGTGAGTTGCCAGCTTCAGTTTGCCAACCTAGAACAAGCCATTTTGGTGGGGGCCAACCTACG
GGACGCTCAGATTGAAGATACGCTCTTCAGTGGAGCCGATTTTACCGATGCCAAGCTCTCCGATGAGACGCGCAAGCTCT
TAATCGAGCGGGCCAGCGGCACCAACGAGCTTACCCAACGGGATACCCTCAACACCTTGCTGGCGGGATTGCAACCCAAG
TCGCGTAAGCTTTTTGGCTTGCTGTGA

Upstream 100 bases:

>100_bases
TCCTCTTAACCTCGGCAGGCGGCGCAAACGTTAGCTTGATAGGTGGGATCCCTGTTGGCCCCCAGTTTACGGCTGGGTTG
GCCGGGTTTCTGGCCTAACT

Downstream 100 bases:

>100_bases
GGTTGGAGCCGTCAAGGACAACCGGGCTAAAGAGAAAACTCAAAACTGGTTGAGGTCGATCCCGGCTTCCCGGGCCATGG
CTCCTATACCCTTGGCCTTG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRNAPSVSAPPSQPSEPVRIETTRDLLEALREGRSLVGANLENAYLSRGLFDRIQMPKSNLTRANLRSISLQQADLRLCN
FRRAELERANFTASDLRGSSFSQALGDYSNFTAAKLDKSSFQGGRFSHSIFREASLVAANLAEGNFFAADFRQANLSRCN
LSQAALVSCQLQFANLEQAILVGANLRDAQIEDTLFSGADFTDAKLSDETRKLLIERASGTNELTQRDTLNTLLAGLQPK
SRKLFGLL

Sequences:

>Translated_248_residues
MRNAPSVSAPPSQPSEPVRIETTRDLLEALREGRSLVGANLENAYLSRGLFDRIQMPKSNLTRANLRSISLQQADLRLCN
FRRAELERANFTASDLRGSSFSQALGDYSNFTAAKLDKSSFQGGRFSHSIFREASLVAANLAEGNFFAADFRQANLSRCN
LSQAALVSCQLQFANLEQAILVGANLRDAQIEDTLFSGADFTDAKLSDETRKLLIERASGTNELTQRDTLNTLLAGLQPK
SRKLFGLL
>Mature_248_residues
MRNAPSVSAPPSQPSEPVRIETTRDLLEALREGRSLVGANLENAYLSRGLFDRIQMPKSNLTRANLRSISLQQADLRLCN
FRRAELERANFTASDLRGSSFSQALGDYSNFTAAKLDKSSFQGGRFSHSIFREASLVAANLAEGNFFAADFRQANLSRCN
LSQAALVSCQLQFANLEQAILVGANLRDAQIEDTLFSGADFTDAKLSDETRKLLIERASGTNELTQRDTLNTLLAGLQPK
SRKLFGLL

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Drosophila melanogaster, GI221377802, Length=170, Percent_Identity=30, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 27279; Mature: 27279

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNAPSVSAPPSQPSEPVRIETTRDLLEALREGRSLVGANLENAYLSRGLFDRIQMPKSN
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCC
LTRANLRSISLQQADLRLCNFRRAELERANFTASDLRGSSFSQALGDYSNFTAAKLDKSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCCCHHHHCCHHH
FQGGRFSHSIFREASLVAANLAEGNFFAADFRQANLSRCNLSQAALVSCQLQFANLEQAI
CCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHCCCCHHHHHHHHHHHCCCCEEE
LVGANLRDAQIEDTLFSGADFTDAKLSDETRKLLIERASGTNELTQRDTLNTLLAGLQPK
EECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
SRKLFGLL
CCHHHCCC
>Mature Secondary Structure
MRNAPSVSAPPSQPSEPVRIETTRDLLEALREGRSLVGANLENAYLSRGLFDRIQMPKSN
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCC
LTRANLRSISLQQADLRLCNFRRAELERANFTASDLRGSSFSQALGDYSNFTAAKLDKSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCCCHHHHCCHHH
FQGGRFSHSIFREASLVAANLAEGNFFAADFRQANLSRCNLSQAALVSCQLQFANLEQAI
CCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHCCCCHHHHHHHHHHHCCCCEEE
LVGANLRDAQIEDTLFSGADFTDAKLSDETRKLLIERASGTNELTQRDTLNTLLAGLQPK
EECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
SRKLFGLL
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA