| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608443
Identifier: 86608443
GI number: 86608443
Start: 1000925
End: 1001389
Strand: Direct
Name: 86608443
Synonym: CYB_0964
Alternate gene names: NA
Gene position: 1000925-1001389 (Clockwise)
Preceding gene: 86608442
Following gene: 86608447
Centisome position: 32.85
GC content: 60.0
Gene sequence:
>465_bases ATGGTTGGGGCTGTTGCTTCTCACCCAGCTTGGCTCCTGTCTCTCCCAGCCCAAGGACAGGTTGTTGGGGCTGTCGAGGA GGGATCCCCGGGCCCCTTTTTTGCAACGGATGGCCTGGCCCTGCGGGGCTATGACCCGGTGGCCTATTTCATCGACGGCA AGCCGGTCAAGGGATCCCCAGCGTATGAATGGGAGTGGGGAGGGGTAACCTGGAGGTTTGCCAGCGCCGACAATCGAGAG CGGTTTCGCAACAACCCAGAGCGCTTTGCCCCCCAGTACGGCGGGTTTTGTGCCTGGGCCGTGGCCCACAACTACCTTTA CCCGGTGGATCCCTTTGCCTGGAAAATTGTTGATGACAAGCTATACCTGAACGCCAACCAGCGGGTACAGCGTAACTGGG AGCGCGACATCCCCGGCTTGATCAAGAGGGCAGATGCCAACTGGCCAGCTTTGAGAAGCCGATAG
Upstream 100 bases:
>100_bases AGGGGAAGAGTAAGGCTTTCTTGCTCATTTCGATTTTCGATTGAGGACTTGGGAGGTTGTGATGGTCAAAAATCGTTGGG CTTTGATCCCGCTGCTGCTG
Downstream 100 bases:
>100_bases GCCCAAGTCCCTCTGGCCTGGGGTTCAATGGGCGAGGCGCAGGGTCACCTTGATGCCAACTCGGTAGGGGCCGCTTTCGC AGAGTTCCAGCTGGCCTCCC
Product: YHS domain-containing protein
Products: NA
Alternate protein names: YHS Domain-Containing Protein; YHS Domain Family; Tat Pathway Signal Sequence Domain Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSPAYEWEWGGVTWRFASADNRE RFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDKLYLNANQRVQRNWERDIPGLIKRADANWPALRSR
Sequences:
>Translated_154_residues MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSPAYEWEWGGVTWRFASADNRE RFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDKLYLNANQRVQRNWERDIPGLIKRADANWPALRSR >Mature_154_residues MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSPAYEWEWGGVTWRFASADNRE RFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDKLYLNANQRVQRNWERDIPGLIKRADANWPALRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17326; Mature: 17326
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSP CCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCEEEECCCCEEEEECCCCCCCCC AYEWEWGGVTWRFASADNRERFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDK CCEEECCCEEEEEECCCCHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCE LYLNANQRVQRNWERDIPGLIKRADANWPALRSR EEECCCHHHHHHHCCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSP CCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCEEEECCCCEEEEECCCCCCCCC AYEWEWGGVTWRFASADNRERFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDK CCEEECCCEEEEEECCCCHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCE LYLNANQRVQRNWERDIPGLIKRADANWPALRSR EEECCCHHHHHHHCCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA