| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608439
Identifier: 86608439
GI number: 86608439
Start: 997526
End: 999121
Strand: Direct
Name: 86608439
Synonym: CYB_0961
Alternate gene names: NA
Gene position: 997526-999121 (Clockwise)
Preceding gene: 86608438
Following gene: 86608442
Centisome position: 32.74
GC content: 64.41
Gene sequence:
>1596_bases ATGGATAGCAACCGTCCTGTCTCCAACCCCATCCGGTTGCAGGTCATGGCCAACGCTCTGGCGGGGATTGCCGAAGAGAT GGGGGCGCGCCTCATCCGCGGTTCATACTCGGCCAACATCAAGGAACGGCGGGATTGCTCCACAGCTCTGTTTGACGCGC AAGGGGCCTGTATTGCCCAGGCAGCCCACATCCCGGTACATCTGGGAGCCCTCTCGGAGGCGGTGCGGGCGGTGGTGGCA GCCGACCCCTGCCCCGGAGATGTGTTTCTCCTCAACGATCCCTACCAGGGGGGATCCCATCTGCCGGACGTTACGGTGGT CGCGGCCATTCCCGGCTGGAGGGATCCCGACCGGATTTGCGCCTATGCTGTGAACCGTGCTCATCACGCTGATATTGGAG GGATGCGCCCTGGCTCCATGCCCGCCGACTCCACAGAACTTTGGCAAGAGGGGCTGGTGATCCCGCCGGTACGGCTGGCT GGGCTCTCTCTAGAAGGAGAGTTGTACTGGCAGGAGGATCTGCTGCGCCTAATCCTGGCCAATGTGCGCAATGCCGAGCA GCGGCGGGGGGATCTGCAGGCCCAGGTGGGGGCCAGCGCAGTGGGGATGAGCCGGTTTCGGGAGTTGCTGGCCCGCTTTG GAGAAGAGGAAGCTTGGCAGTTGATCGCAGGGGTCATCGAGTACAGCCGCCGGCGGATGCGGGCGCAAATTCAGGCTCTG CCCGATGGGATCTACACGGCTGAGGATTGGTTGGAGGGCTACGGGGATCCGCCCGCGCCCCTTGAGATTCGGGTGCAGGT GGAAGTAGAGGGCGAGAAGCTGCGGGTGGACTTCACCGGCACTGCTCCGGCCATGGCGGGAAACCTGAACGCGCCCCTGG CCGTCACCCGCTCGGCGGTGTTGTTTGCCCTGCGCTGTCTGTTGGATCCCACGGCCCCCAGCAATGTCGGCTTGGAGGAT CCCATCGAGATCGTGGCGCCGCCCGGCTGCTTGGTGAATGCCCAGTTTCCGGCAGCAGTGGTGGCGGGCAATGTGGAAAC CTCGCAGCGCATTGCCGATGTGGTGTTCAAAGCTCTGGCTCCCGTGGCCGGATTGCGGAGCATCGCTCAGGGGCAGGGCA CCATGAACAACTGTGTGCTGGGCAACCGCCACTTCACCTACTACGAAACCCTGGGAGGTGGTCAGGGGGCCAGCCGGCAA CGACCGGGTTTGGACGGAGTGCATGTGGGCATGAGCAATACCCTCAACACCCCCATCGAGGCTCTGGAGCTGGAGTATCC CCTGCGGGTACTGCGCTACGAGCTACGCCAGGATTCCGGCGGCCATGGCCAACAGCGGGGCGGCTGGGGGCTAATCCGCT CCATCCAGACTTTGCAGGATTGCACCCTCTCCCTGCTCACCGAGCGGCGCCATTATGCCCCCCAAGGAGAACAGGGGGGT GGGCCAGGCCAGGTGGGGATCAACCTCCTCAACGGGGATCCCCTACCCGGCAAAATCAGCCGCTCCCTAAAAGCCGGCGA CGTGATCACCCTCTACACGCCGGGCGGCGGGGCTTGGGGCTCAAACGAGGATGAGCAGGCTCCCGAACCCAGGTAG
Upstream 100 bases:
>100_bases AATCGCCATACCCTTGCCCGCTGGCAACGTCGTTTGCAGTTCTGGCAAGGGATCCGCAGGGTGGCCGTTTGGCTGCGGCG CAGGCTTTGATTGGAGAGGT
Downstream 100 bases:
>100_bases CGCAGGTGGTCAAGAAACAACTGCTCGCAGCGGCGAAGCACCTCATCGCGGCTGGCGAAGTGCTCCAGCCTTTGCACTTC TTGACCTTTCTCAAACAAAA
Product: hydantoinase/oxoprolinase family protein
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MDSNRPVSNPIRLQVMANALAGIAEEMGARLIRGSYSANIKERRDCSTALFDAQGACIAQAAHIPVHLGALSEAVRAVVA ADPCPGDVFLLNDPYQGGSHLPDVTVVAAIPGWRDPDRICAYAVNRAHHADIGGMRPGSMPADSTELWQEGLVIPPVRLA GLSLEGELYWQEDLLRLILANVRNAEQRRGDLQAQVGASAVGMSRFRELLARFGEEEAWQLIAGVIEYSRRRMRAQIQAL PDGIYTAEDWLEGYGDPPAPLEIRVQVEVEGEKLRVDFTGTAPAMAGNLNAPLAVTRSAVLFALRCLLDPTAPSNVGLED PIEIVAPPGCLVNAQFPAAVVAGNVETSQRIADVVFKALAPVAGLRSIAQGQGTMNNCVLGNRHFTYYETLGGGQGASRQ RPGLDGVHVGMSNTLNTPIEALELEYPLRVLRYELRQDSGGHGQQRGGWGLIRSIQTLQDCTLSLLTERRHYAPQGEQGG GPGQVGINLLNGDPLPGKISRSLKAGDVITLYTPGGGAWGSNEDEQAPEPR
Sequences:
>Translated_531_residues MDSNRPVSNPIRLQVMANALAGIAEEMGARLIRGSYSANIKERRDCSTALFDAQGACIAQAAHIPVHLGALSEAVRAVVA ADPCPGDVFLLNDPYQGGSHLPDVTVVAAIPGWRDPDRICAYAVNRAHHADIGGMRPGSMPADSTELWQEGLVIPPVRLA GLSLEGELYWQEDLLRLILANVRNAEQRRGDLQAQVGASAVGMSRFRELLARFGEEEAWQLIAGVIEYSRRRMRAQIQAL PDGIYTAEDWLEGYGDPPAPLEIRVQVEVEGEKLRVDFTGTAPAMAGNLNAPLAVTRSAVLFALRCLLDPTAPSNVGLED PIEIVAPPGCLVNAQFPAAVVAGNVETSQRIADVVFKALAPVAGLRSIAQGQGTMNNCVLGNRHFTYYETLGGGQGASRQ RPGLDGVHVGMSNTLNTPIEALELEYPLRVLRYELRQDSGGHGQQRGGWGLIRSIQTLQDCTLSLLTERRHYAPQGEQGG GPGQVGINLLNGDPLPGKISRSLKAGDVITLYTPGGGAWGSNEDEQAPEPR >Mature_531_residues MDSNRPVSNPIRLQVMANALAGIAEEMGARLIRGSYSANIKERRDCSTALFDAQGACIAQAAHIPVHLGALSEAVRAVVA ADPCPGDVFLLNDPYQGGSHLPDVTVVAAIPGWRDPDRICAYAVNRAHHADIGGMRPGSMPADSTELWQEGLVIPPVRLA GLSLEGELYWQEDLLRLILANVRNAEQRRGDLQAQVGASAVGMSRFRELLARFGEEEAWQLIAGVIEYSRRRMRAQIQAL PDGIYTAEDWLEGYGDPPAPLEIRVQVEVEGEKLRVDFTGTAPAMAGNLNAPLAVTRSAVLFALRCLLDPTAPSNVGLED PIEIVAPPGCLVNAQFPAAVVAGNVETSQRIADVVFKALAPVAGLRSIAQGQGTMNNCVLGNRHFTYYETLGGGQGASRQ RPGLDGVHVGMSNTLNTPIEALELEYPLRVLRYELRQDSGGHGQQRGGWGLIRSIQTLQDCTLSLLTERRHYAPQGEQGG GPGQVGINLLNGDPLPGKISRSLKAGDVITLYTPGGGAWGSNEDEQAPEPR
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=545, Percent_Identity=41.651376146789, Blast_Score=332, Evalue=6e-91, Organism=Caenorhabditis elegans, GI133901900, Length=545, Percent_Identity=38.1651376146789, Blast_Score=313, Evalue=2e-85, Organism=Caenorhabditis elegans, GI133901902, Length=522, Percent_Identity=36.9731800766284, Blast_Score=283, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6322634, Length=559, Percent_Identity=34.1681574239714, Blast_Score=303, Evalue=5e-83, Organism=Drosophila melanogaster, GI45550492, Length=537, Percent_Identity=37.6163873370577, Blast_Score=303, Evalue=2e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 56892; Mature: 56892
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSNRPVSNPIRLQVMANALAGIAEEMGARLIRGSYSANIKERRDCSTALFDAQGACIAQ CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHH AAHIPVHLGALSEAVRAVVAADPCPGDVFLLNDPYQGGSHLPDVTVVAAIPGWRDPDRIC HCCCCEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHH AYAVNRAHHADIGGMRPGSMPADSTELWQEGLVIPPVRLAGLSLEGELYWQEDLLRLILA HHHHHCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHCCEECCCCEEEHHHHHHHHHH NVRNAEQRRGDLQAQVGASAVGMSRFRELLARFGEEEAWQLIAGVIEYSRRRMRAQIQAL HHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC PDGIYTAEDWLEGYGDPPAPLEIRVQVEVEGEKLRVDFTGTAPAMAGNLNAPLAVTRSAV CCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHH LFALRCLLDPTAPSNVGLEDPIEIVAPPGCLVNAQFPAAVVAGNVETSQRIADVVFKALA HHHHHHHCCCCCCCCCCCCCCHHEECCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHH PVAGLRSIAQGQGTMNNCVLGNRHFTYYETLGGGQGASRQRPGLDGVHVGMSNTLNTPIE HHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCHH ALELEYPLRVLRYELRQDSGGHGQQRGGWGLIRSIQTLQDCTLSLLTERRHYAPQGEQGG HHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPGQVGINLLNGDPLPGKISRSLKAGDVITLYTPGGGAWGSNEDEQAPEPR CCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDSNRPVSNPIRLQVMANALAGIAEEMGARLIRGSYSANIKERRDCSTALFDAQGACIAQ CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHH AAHIPVHLGALSEAVRAVVAADPCPGDVFLLNDPYQGGSHLPDVTVVAAIPGWRDPDRIC HCCCCEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHH AYAVNRAHHADIGGMRPGSMPADSTELWQEGLVIPPVRLAGLSLEGELYWQEDLLRLILA HHHHHCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHCCEECCCCEEEHHHHHHHHHH NVRNAEQRRGDLQAQVGASAVGMSRFRELLARFGEEEAWQLIAGVIEYSRRRMRAQIQAL HHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC PDGIYTAEDWLEGYGDPPAPLEIRVQVEVEGEKLRVDFTGTAPAMAGNLNAPLAVTRSAV CCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHH LFALRCLLDPTAPSNVGLEDPIEIVAPPGCLVNAQFPAAVVAGNVETSQRIADVVFKALA HHHHHHHCCCCCCCCCCCCCCHHEECCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHH PVAGLRSIAQGQGTMNNCVLGNRHFTYYETLGGGQGASRQRPGLDGVHVGMSNTLNTPIE HHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCHH ALELEYPLRVLRYELRQDSGGHGQQRGGWGLIRSIQTLQDCTLSLLTERRHYAPQGEQGG HHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPGQVGINLLNGDPLPGKISRSLKAGDVITLYTPGGGAWGSNEDEQAPEPR CCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]