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The map label for this gene is 86608437

Identifier: 86608437

GI number: 86608437

Start: 996438

End: 997175

Strand: Direct

Name: 86608437

Synonym: CYB_0958

Alternate gene names: NA

Gene position: 996438-997175 (Clockwise)

Preceding gene: 86608436

Following gene: 86608438

Centisome position: 32.71

GC content: 59.21

Gene sequence:

>738_bases
TTGAAGAATTGCTACAGGAAGGCCGGCAAAACCTTGGGATCCAGCCCAGAAGCACGGCCAAGCCTATCGACAGTTGGCGA
TTTTGGGTTTATCACTGAGGGAGGGGCGGTGCAAGCTGCCCACACCTGGCTGGTGCATCCACCCAAGTGCTTCGCGGATT
CAAGCTCATTTCTACTTCACCGTTTCCAGGGTCGAACCATGCAGAAACCAACCCATCTGTTCAAGCTTGCCCTAGCCCTG
CCCATCTCCTTCTTGCTGGCAGATGCAGTTGTGGCCTACCCCTGCGACTCGGTTGGGGGTGAAGCTTACAACCACCACGG
CTCCACGGTTCAGGTCAGCAGCGACGCCAACAGCTTCGGGGTTCAGTGGTCGCCTGCCTCCTATGCTGTCGGCAACGGCT
TCATTGGAGTTGCCATTGAAACGGTGAACGGCGAGCAAGCCCAGAGCGCCATCAGCCGTCGTCTGTTCGGCCCCGCACTT
CGAGTTCAGGGGGTGCAGGTGGTCGGCTTGCTCCAGGATGGTCCTGCTCAACGAGCCGGTCTGGCCCAGGGCGATATTTT
GATTGGAGTGGATGGGCAGCGGGTCACCTCCGTGCAACATGTGCAGCAGATCATCCAAAATACCCCGGTAGGCCAATCGG
TGCCGATTACCTTCCGCCGTGGTGAGCAGGTGCTGTCAACGGTGGTTGTGGTGGGGGATGGCCGGGTGTTGCGCCCCTTG
ATGCTGCAGCAGCAGTGA

Upstream 100 bases:

>100_bases
TGAACCCGGAATCCGCACCGCCCTCCTGGAAGCCACCGATCGCTTTGCCGGTTTGTGAGCCCCGCCGAGCCAACCCAGTG
CTGCCAGGGATCCCAAGACC

Downstream 100 bases:

>100_bases
GCCTTGTCGGGATCCCTACCCGGAGCTCTCTGTGAATGCCAATTGGAGTTCGGGATGGGCTGTCTGGGCAGTTTGCGGCC
TCAACGGCTTGCTGTTTTTG

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKNCYRKAGKTLGSSPEARPSLSTVGDFGFITEGGAVQAAHTWLVHPPKCFADSSSFLLHRFQGRTMQKPTHLFKLALAL
PISFLLADAVVAYPCDSVGGEAYNHHGSTVQVSSDANSFGVQWSPASYAVGNGFIGVAIETVNGEQAQSAISRRLFGPAL
RVQGVQVVGLLQDGPAQRAGLAQGDILIGVDGQRVTSVQHVQQIIQNTPVGQSVPITFRRGEQVLSTVVVVGDGRVLRPL
MLQQQ

Sequences:

>Translated_245_residues
MKNCYRKAGKTLGSSPEARPSLSTVGDFGFITEGGAVQAAHTWLVHPPKCFADSSSFLLHRFQGRTMQKPTHLFKLALAL
PISFLLADAVVAYPCDSVGGEAYNHHGSTVQVSSDANSFGVQWSPASYAVGNGFIGVAIETVNGEQAQSAISRRLFGPAL
RVQGVQVVGLLQDGPAQRAGLAQGDILIGVDGQRVTSVQHVQQIIQNTPVGQSVPITFRRGEQVLSTVVVVGDGRVLRPL
MLQQQ
>Mature_245_residues
MKNCYRKAGKTLGSSPEARPSLSTVGDFGFITEGGAVQAAHTWLVHPPKCFADSSSFLLHRFQGRTMQKPTHLFKLALAL
PISFLLADAVVAYPCDSVGGEAYNHHGSTVQVSSDANSFGVQWSPASYAVGNGFIGVAIETVNGEQAQSAISRRLFGPAL
RVQGVQVVGLLQDGPAQRAGLAQGDILIGVDGQRVTSVQHVQQIIQNTPVGQSVPITFRRGEQVLSTVVVVGDGRVLRPL
MLQQQ

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26044; Mature: 26044

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNCYRKAGKTLGSSPEARPSLSTVGDFGFITEGGAVQAAHTWLVHPPKCFADSSSFLLH
CCHHHHHHHHHCCCCCCCCCCCHHCCCCCEEECCCCEEEEEEEEECCCHHHCCCHHHHHH
RFQGRTMQKPTHLFKLALALPISFLLADAVVAYPCDSVGGEAYNHHGSTVQVSSDANSFG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC
VQWSPASYAVGNGFIGVAIETVNGEQAQSAISRRLFGPALRVQGVQVVGLLQDGPAQRAG
EEECCCCEECCCCEEEEEEEECCCHHHHHHHHHHHCCCHHEECCEEEEEEECCCCCHHCC
LAQGDILIGVDGQRVTSVQHVQQIIQNTPVGQSVPITFRRGEQVLSTVVVVGDGRVLRPL
CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHEEEEEEECCCCEEHHH
MLQQQ
HHCCC
>Mature Secondary Structure
MKNCYRKAGKTLGSSPEARPSLSTVGDFGFITEGGAVQAAHTWLVHPPKCFADSSSFLLH
CCHHHHHHHHHCCCCCCCCCCCHHCCCCCEEECCCCEEEEEEEEECCCHHHCCCHHHHHH
RFQGRTMQKPTHLFKLALALPISFLLADAVVAYPCDSVGGEAYNHHGSTVQVSSDANSFG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC
VQWSPASYAVGNGFIGVAIETVNGEQAQSAISRRLFGPALRVQGVQVVGLLQDGPAQRAG
EEECCCCEECCCCEEEEEEEECCCHHHHHHHHHHHCCCHHEECCEEEEEEECCCCCHHCC
LAQGDILIGVDGQRVTSVQHVQQIIQNTPVGQSVPITFRRGEQVLSTVVVVGDGRVLRPL
CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHEEEEEEECCCCEEHHH
MLQQQ
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA