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The map label for this gene is pbpG [H]

Identifier: 86608430

GI number: 86608430

Start: 986822

End: 989176

Strand: Direct

Name: pbpG [H]

Synonym: CYB_0950

Alternate gene names: 86608430

Gene position: 986822-989176 (Clockwise)

Preceding gene: 86608429

Following gene: 86608434

Centisome position: 32.39

GC content: 61.44

Gene sequence:

>2355_bases
ATGTCTGCTTCTGAAGACAAAAAGCCGCTGTTGAGCACCGTCGCTCGCCTCTTCAAAACTCTGGCGAGGCCTTTCCCTGT
CGGGCCTACAGCTCTCCTCAAACCCCCCGAACCTCCTCCCCCCAAGCGCCCGGTGCGCCTGCGGATTACCTGCCCAGGAG
AGCCCCCCCAGGTGGTTGCCCTGAAGGGATCCGACATTCTCGGTCGCAGCCAGACGGTGGCCACCATTCGCATCCCTGCC
CCCGCGGTGAGCCATCTCCACGCCCACATCCGTCCCCGCCCGGATTGGCGCCTGCCCGGTCTGGGTTGGCGGATCCCGTT
GCCCCCTATTCTCTACTGGCTGGGGTGGAATGCCGGTCGCTACCAGCTAGAAGATCAAGACTCGACCAACGGCGTTTTCC
GCCTCAAACCCTTCGGTGGTGTCGAGCGGGTGCGCCGGGTGATCTTGCGGCATGGCCAGCAACTGAGCCTTGGCCCGCCT
TGGGATCCGGAGAGCATCTGGATTCAAGTGCTGGATCCACCCCCACCACAGGTGTATGGGGTGCGCGGCTGCCTCATCCT
GATAGTGGTCTTGGGGCTGGGGGCGAGGATTTGGATCGGCCATGAGTGGAGCAAGTTCTCAGTGGAGCCACCCCTCTCCG
CGGATCGCAACCCCCTGATCGTCCTGGCCGGGGATCAGCAGACGGAGCTGCGCCGCCATCAGGGGGACACCTACCGGGAG
CTGCCCAACCTAGAAGCTTTTGGGCCGATTTTGCCCAAGGTGGTGGTCGCCGCCGAAGATCACCGCTTTTACTCCCACTT
TGGGGTGGATCTGCTGGGCATTGCCCGCGCCTTTTGGGTGAACCTGCGCTCGGGGGAAGTGCAGCAGGGGGGCAGCTCCA
TCAGCCAACAACTGGCCCGCACCGTGCTGCGGGACTACACCGGCTCCGGCAACACCTTCGGGCGCAAGCTGCGGGAGGCC
GTCGCTGCCCTGAAGCTGGAACAGCGCTACAGCAAAGACGAAATCCTCGCTCTCTACCTCAACAATGTTTACCTGGGCAA
CGGCATCTACGGCTTTGAAACTGCTGCCCAGTTCTATTTCGGGATCCCAAGCCGCCAGCTCAGCCTTTCCGAAGCTGCGA
CCTTGGCGGCCATTTTGCCCGCGCCCAACGCCTTTAACCCCGTCGCCAACTATGATGCCGCCGTTCGAGGCCGGGATCGG
GTGTTGGATCGCCTGAGCGAGCTGAAAGTCTTCCCCGAAGAGGAGATTCGGCGGGCCCGGCGCAGTCGCCTCACCCTCAA
CCCCAATTTGCGCTCCCAAACCATGACAGTTGCTCCCTACTTTTACAGCGCTGTCTTCCAGGAGCTGCGGCAGCTTTTGG
GCCAAGACCTCTCGGCAGAGGGCAACTTCATCATCGAAACCACGGTGCATCTGCCCTACCAGCGTTTGGCAGAGCAAGTC
CTGGCCCAAACGGTGCGCGAGTCGGGATCCCGCTTGGGCTTCAGCCAAGGCGCTTTGGTCAGTCTCGACAGCCGCAACGG
CGAAGTGCTGGCTTTGGTGGGCGGGATCGACTACAACGCCAGCCCCTTCAACCGGGCTACCCAAGCTCAAAGGCAGCCGG
GCTCCACCTTCAAAGTGTTCACCTATGCGGCTGCCCTCACCCAGGGGATCCCTCTCTCCCAAGTGTTGTCTTGCGAGCCC
CTCACCTGGGGCAACCTCACCTTTCGGGGCTGTCGCTCGGGATCGGCCCCTATGGATTTGGCCCGCGGCCTGATCCTCTC
CGAAAACGTGATTGCCCTGCGGTTGGCCCAACAAGTCGGTCTAGAGCAAGTGGTGGCGACGGCCCGGCAAATGGGCATCC
AATCGCCGTTGCAACCCTATCCTTCTATGGTGATCGGCACCATGGAGGTGAACTTGCTGGAGTTGACAGCGGCCTTCACT
CCTTTTGCCAATCGTGGCCTTTGGTCAAGGCCCCACACCATCCGCCGCATCTTGGATAGCAGCGATTGCGCCAACCCCAA
CGACTTTCGCACCTGCCGTGAGATTTACCCTGGTCGGGAGGATCCCCGCTCTCAGCGACTTGTCCTGCCAGAAACCGTCG
CCCAACAGATGACAACCGTACTGCAAGGGGTGATCAGCTCCGGCACCGGCACTGCTGCCCGGCTCGGCATTGGAGAAGCC
GGTAAAACCGGCACCACCACCGCCAACAAGGATCTGCTCTTTATCGGCTACACGCCCAACCCTCCCCTGGTGACCGGCAT
TTGGCTGGGCAATGATGACTCTAGCCCAACACGAGGAAGCAGCAGCATAGCTGCTCAAACTTGGGGAAATTACACGAGGC
AAGTCATTACCAATAGTTTGACGATGGTTCAATAG

Upstream 100 bases:

>100_bases
TAAAGCTCCTAACCCCCATTCGGCAGCGGGCGGCCCTCGGCCCGGCCAGACCATGCAGGAGCTGCTGCGCCGTGCGCGCG
AATTGCGGGGGGACTGAGCC

Downstream 100 bases:

>100_bases
AGCAACTCCGAGAGCAGCCTTGGCAATTGGCAACCCCAAATCCTGACAACCCGACAGAAAACTCTCCTGCATCCCAAGTG
AGAAATGCCTAATAACCAGT

Product: 1A family penicillin-binding protein

Products: NA

Alternate protein names: PBP-2D; PBP2d [H]

Number of amino acids: Translated: 784; Mature: 783

Protein sequence:

>784_residues
MSASEDKKPLLSTVARLFKTLARPFPVGPTALLKPPEPPPPKRPVRLRITCPGEPPQVVALKGSDILGRSQTVATIRIPA
PAVSHLHAHIRPRPDWRLPGLGWRIPLPPILYWLGWNAGRYQLEDQDSTNGVFRLKPFGGVERVRRVILRHGQQLSLGPP
WDPESIWIQVLDPPPPQVYGVRGCLILIVVLGLGARIWIGHEWSKFSVEPPLSADRNPLIVLAGDQQTELRRHQGDTYRE
LPNLEAFGPILPKVVVAAEDHRFYSHFGVDLLGIARAFWVNLRSGEVQQGGSSISQQLARTVLRDYTGSGNTFGRKLREA
VAALKLEQRYSKDEILALYLNNVYLGNGIYGFETAAQFYFGIPSRQLSLSEAATLAAILPAPNAFNPVANYDAAVRGRDR
VLDRLSELKVFPEEEIRRARRSRLTLNPNLRSQTMTVAPYFYSAVFQELRQLLGQDLSAEGNFIIETTVHLPYQRLAEQV
LAQTVRESGSRLGFSQGALVSLDSRNGEVLALVGGIDYNASPFNRATQAQRQPGSTFKVFTYAAALTQGIPLSQVLSCEP
LTWGNLTFRGCRSGSAPMDLARGLILSENVIALRLAQQVGLEQVVATARQMGIQSPLQPYPSMVIGTMEVNLLELTAAFT
PFANRGLWSRPHTIRRILDSSDCANPNDFRTCREIYPGREDPRSQRLVLPETVAQQMTTVLQGVISSGTGTAARLGIGEA
GKTGTTTANKDLLFIGYTPNPPLVTGIWLGNDDSSPTRGSSSIAAQTWGNYTRQVITNSLTMVQ

Sequences:

>Translated_784_residues
MSASEDKKPLLSTVARLFKTLARPFPVGPTALLKPPEPPPPKRPVRLRITCPGEPPQVVALKGSDILGRSQTVATIRIPA
PAVSHLHAHIRPRPDWRLPGLGWRIPLPPILYWLGWNAGRYQLEDQDSTNGVFRLKPFGGVERVRRVILRHGQQLSLGPP
WDPESIWIQVLDPPPPQVYGVRGCLILIVVLGLGARIWIGHEWSKFSVEPPLSADRNPLIVLAGDQQTELRRHQGDTYRE
LPNLEAFGPILPKVVVAAEDHRFYSHFGVDLLGIARAFWVNLRSGEVQQGGSSISQQLARTVLRDYTGSGNTFGRKLREA
VAALKLEQRYSKDEILALYLNNVYLGNGIYGFETAAQFYFGIPSRQLSLSEAATLAAILPAPNAFNPVANYDAAVRGRDR
VLDRLSELKVFPEEEIRRARRSRLTLNPNLRSQTMTVAPYFYSAVFQELRQLLGQDLSAEGNFIIETTVHLPYQRLAEQV
LAQTVRESGSRLGFSQGALVSLDSRNGEVLALVGGIDYNASPFNRATQAQRQPGSTFKVFTYAAALTQGIPLSQVLSCEP
LTWGNLTFRGCRSGSAPMDLARGLILSENVIALRLAQQVGLEQVVATARQMGIQSPLQPYPSMVIGTMEVNLLELTAAFT
PFANRGLWSRPHTIRRILDSSDCANPNDFRTCREIYPGREDPRSQRLVLPETVAQQMTTVLQGVISSGTGTAARLGIGEA
GKTGTTTANKDLLFIGYTPNPPLVTGIWLGNDDSSPTRGSSSIAAQTWGNYTRQVITNSLTMVQ
>Mature_783_residues
SASEDKKPLLSTVARLFKTLARPFPVGPTALLKPPEPPPPKRPVRLRITCPGEPPQVVALKGSDILGRSQTVATIRIPAP
AVSHLHAHIRPRPDWRLPGLGWRIPLPPILYWLGWNAGRYQLEDQDSTNGVFRLKPFGGVERVRRVILRHGQQLSLGPPW
DPESIWIQVLDPPPPQVYGVRGCLILIVVLGLGARIWIGHEWSKFSVEPPLSADRNPLIVLAGDQQTELRRHQGDTYREL
PNLEAFGPILPKVVVAAEDHRFYSHFGVDLLGIARAFWVNLRSGEVQQGGSSISQQLARTVLRDYTGSGNTFGRKLREAV
AALKLEQRYSKDEILALYLNNVYLGNGIYGFETAAQFYFGIPSRQLSLSEAATLAAILPAPNAFNPVANYDAAVRGRDRV
LDRLSELKVFPEEEIRRARRSRLTLNPNLRSQTMTVAPYFYSAVFQELRQLLGQDLSAEGNFIIETTVHLPYQRLAEQVL
AQTVRESGSRLGFSQGALVSLDSRNGEVLALVGGIDYNASPFNRATQAQRQPGSTFKVFTYAAALTQGIPLSQVLSCEPL
TWGNLTFRGCRSGSAPMDLARGLILSENVIALRLAQQVGLEQVVATARQMGIQSPLQPYPSMVIGTMEVNLLELTAAFTP
FANRGLWSRPHTIRRILDSSDCANPNDFRTCREIYPGREDPRSQRLVLPETVAQQMTTVLQGVISSGTGTAARLGIGEAG
KTGTTTANKDLLFIGYTPNPPLVTGIWLGNDDSSPTRGSSSIAAQTWGNYTRQVITNSLTMVQ

Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]

COG id: COG0744

COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transpeptidase family [H]

Homologues:

Organism=Escherichia coli, GI1786343, Length=551, Percent_Identity=30.8529945553539, Blast_Score=190, Evalue=4e-49,
Organism=Escherichia coli, GI1788867, Length=605, Percent_Identity=28.4297520661157, Blast_Score=162, Evalue=1e-40,
Organism=Escherichia coli, GI87082258, Length=278, Percent_Identity=36.3309352517986, Blast_Score=156, Evalue=4e-39,
Organism=Escherichia coli, GI1789601, Length=220, Percent_Identity=35.4545454545455, Blast_Score=100, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001264
- InterPro:   IPR011816
- InterPro:   IPR001460 [H]

Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]

EC number: 2.4.1.129; 3.4.-.- [C]

Molecular weight: Translated: 86294; Mature: 86163

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASEDKKPLLSTVARLFKTLARPFPVGPTALLKPPEPPPPKRPVRLRITCPGEPPQVVA
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEE
LKGSDILGRSQTVATIRIPAPAVSHLHAHIRPRPDWRLPGLGWRIPLPPILYWLGWNAGR
ECCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
YQLEDQDSTNGVFRLKPFGGVERVRRVILRHGQQLSLGPPWDPESIWIQVLDPPPPQVYG
EEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEH
VRGCLILIVVLGLGARIWIGHEWSKFSVEPPLSADRNPLIVLAGDQQTELRRHQGDTYRE
HHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCCCEEEEECCCHHHHHHHCCCHHHH
LPNLEAFGPILPKVVVAAEDHRFYSHFGVDLLGIARAFWVNLRSGEVQQGGSSISQQLAR
CCCCCHHHHHHHHEEEEECCCCHHHHHCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH
TVLRDYTGSGNTFGRKLREAVAALKLEQRYSKDEILALYLNNVYLGNGIYGFETAAQFYF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCHHHHHHHHC
GIPSRQLSLSEAATLAAILPAPNAFNPVANYDAAVRGRDRVLDRLSELKVFPEEEIRRAR
CCCCCCCCHHHHHHEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHH
RSRLTLNPNLRSQTMTVAPYFYSAVFQELRQLLGQDLSAEGNFIIETTVHLPYQRLAEQV
HHCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHH
LAQTVRESGSRLGFSQGALVSLDSRNGEVLALVGGIDYNASPFNRATQAQRQPGSTFKVF
HHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEHH
TYAAALTQGIPLSQVLSCEPLTWGNLTFRGCRSGSAPMDLARGLILSENVIALRLAQQVG
HHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHC
LEQVVATARQMGIQSPLQPYPSMVIGTMEVNLLELTAAFTPFANRGLWSRPHTIRRILDS
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEHHHHHHHHCCHHCCCCCCCCHHHHHHHCC
SDCANPNDFRTCREIYPGREDPRSQRLVLPETVAQQMTTVLQGVISSGTGTAARLGIGEA
CCCCCCHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
GKTGTTTANKDLLFIGYTPNPPLVTGIWLGNDDSSPTRGSSSIAAQTWGNYTRQVITNSL
CCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
TMVQ
HCCC
>Mature Secondary Structure 
SASEDKKPLLSTVARLFKTLARPFPVGPTALLKPPEPPPPKRPVRLRITCPGEPPQVVA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEE
LKGSDILGRSQTVATIRIPAPAVSHLHAHIRPRPDWRLPGLGWRIPLPPILYWLGWNAGR
ECCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
YQLEDQDSTNGVFRLKPFGGVERVRRVILRHGQQLSLGPPWDPESIWIQVLDPPPPQVYG
EEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEH
VRGCLILIVVLGLGARIWIGHEWSKFSVEPPLSADRNPLIVLAGDQQTELRRHQGDTYRE
HHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCCCEEEEECCCHHHHHHHCCCHHHH
LPNLEAFGPILPKVVVAAEDHRFYSHFGVDLLGIARAFWVNLRSGEVQQGGSSISQQLAR
CCCCCHHHHHHHHEEEEECCCCHHHHHCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH
TVLRDYTGSGNTFGRKLREAVAALKLEQRYSKDEILALYLNNVYLGNGIYGFETAAQFYF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCHHHHHHHHC
GIPSRQLSLSEAATLAAILPAPNAFNPVANYDAAVRGRDRVLDRLSELKVFPEEEIRRAR
CCCCCCCCHHHHHHEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHH
RSRLTLNPNLRSQTMTVAPYFYSAVFQELRQLLGQDLSAEGNFIIETTVHLPYQRLAEQV
HHCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHH
LAQTVRESGSRLGFSQGALVSLDSRNGEVLALVGGIDYNASPFNRATQAQRQPGSTFKVF
HHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEHH
TYAAALTQGIPLSQVLSCEPLTWGNLTFRGCRSGSAPMDLARGLILSENVIALRLAQQVG
HHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHC
LEQVVATARQMGIQSPLQPYPSMVIGTMEVNLLELTAAFTPFANRGLWSRPHTIRRILDS
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEHHHHHHHHCCHHCCCCCCCCHHHHHHHCC
SDCANPNDFRTCREIYPGREDPRSQRLVLPETVAQQMTTVLQGVISSGTGTAARLGIGEA
CCCCCCHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
GKTGTTTANKDLLFIGYTPNPPLVTGIWLGNDDSSPTRGSSSIAAQTWGNYTRQVITNSL
CCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
TMVQ
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]