Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is tatC [C]
Identifier: 86608409
GI number: 86608409
Start: 967382
End: 968164
Strand: Reverse
Name: tatC [C]
Synonym: CYB_0929
Alternate gene names: 86608409
Gene position: 968164-967382 (Counterclockwise)
Preceding gene: 86608410
Following gene: 86608408
Centisome position: 31.78
GC content: 60.79
Gene sequence:
>783_bases ATGACCCTTGCCTCTGAGACCGAGTCCCCGGAGCAAGCCGCGGCGGCCCCTGAGCCTGGTCGGGTGCGGGATCCGGAGTT TCCCTACGAGGTCGAAATGACCTTGATGGAGCACTTGGAAGAGCTGCGCAGCCGCCTGTTGGCCAGCGTGATCGCGGTGG CGATCTGCATCATCGCCTGCTTTGCCGTGGTGAATCGCATTGTCGCCCTGCTGGAGGTGCCCGCTCGGGGGGTTACCTTT TTGCAACTGGCGCCGGGGGAGTATTTTTTCGTTTCTGTGAAGGTGGCGGCCTACTCGGGGTTATTGCTGGCCACGCCCTT TTTGCTCTACCAAATTGCCCGCTTCGTCTTGCCGGGTCTGAGCGTGAAGGAGCGCAAGCTGCTGGGGCCGGTGGTGCTGG GATCCAGCCTTCTCTTTGTGGCCGGCTTGGTCTTTGCCTACTATCTCCTCATTCCGGCGGCGCTCAACTTTTTCATTCGC TACGGCGAAGGGGTGGTGGATCAGGCTTGGTCCATCGACCGCTACTTTGAGTTTGTGCTGCTGCTGCTGTTCAGCACCGG CCTGGCCTTTCAGGTGCCGATTTTGCAGGCGCTGCTGGGGGCGCTGGGTCTGGTGACTGCCGAGCAGATGTTCAAGGGCT GGCGCTACGTGGTTCTGGGCGCGGTGGTGGCGGGGGCCATTCTCACCCCCTCGACGGATCCCCTTACCCAGAGCCTTTTG GCCGGGGCTGTGACGTTTCTATATTTGTTTGGCATTCTGCTGGTGAAGCTCCTTGGCAAATGA
Upstream 100 bases:
>100_bases TTGGGCCACCGCCCAATGGCGAGGAGTGTTGGGCAAGTGCTTTTCCCTGGAGAGGGGGCAGCGCTAAGATAGCGGGGAAC GTTTCGTTACACCTTGGCCC
Downstream 100 bases:
>100_bases GCCGAAGCTGCATGCGCTGATCTTGGCGGCTGGGTTTTCCACGCGGATGGGAGAGCCGAAAGCCTTTCTGCCCTGGAAAG ACGGGCAAACCCTGCTCTCT
Product: Sec-independent protein translocase TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTLASETESPEQAAAAPEPGRVRDPEFPYEVEMTLMEHLEELRSRLLASVIAVAICIIACFAVVNRIVALLEVPARGVTF LQLAPGEYFFVSVKVAAYSGLLLATPFLLYQIARFVLPGLSVKERKLLGPVVLGSSLLFVAGLVFAYYLLIPAALNFFIR YGEGVVDQAWSIDRYFEFVLLLLFSTGLAFQVPILQALLGALGLVTAEQMFKGWRYVVLGAVVAGAILTPSTDPLTQSLL AGAVTFLYLFGILLVKLLGK
Sequences:
>Translated_260_residues MTLASETESPEQAAAAPEPGRVRDPEFPYEVEMTLMEHLEELRSRLLASVIAVAICIIACFAVVNRIVALLEVPARGVTF LQLAPGEYFFVSVKVAAYSGLLLATPFLLYQIARFVLPGLSVKERKLLGPVVLGSSLLFVAGLVFAYYLLIPAALNFFIR YGEGVVDQAWSIDRYFEFVLLLLFSTGLAFQVPILQALLGALGLVTAEQMFKGWRYVVLGAVVAGAILTPSTDPLTQSLL AGAVTFLYLFGILLVKLLGK >Mature_259_residues TLASETESPEQAAAAPEPGRVRDPEFPYEVEMTLMEHLEELRSRLLASVIAVAICIIACFAVVNRIVALLEVPARGVTFL QLAPGEYFFVSVKVAAYSGLLLATPFLLYQIARFVLPGLSVKERKLLGPVVLGSSLLFVAGLVFAYYLLIPAALNFFIRY GEGVVDQAWSIDRYFEFVLLLLFSTGLAFQVPILQALLGALGLVTAEQMFKGWRYVVLGAVVAGAILTPSTDPLTQSLLA GAVTFLYLFGILLVKLLGK
Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=237, Percent_Identity=33.7552742616034, Blast_Score=121, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 28249; Mature: 28118
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLASETESPEQAAAAPEPGRVRDPEFPYEVEMTLMEHLEELRSRLLASVIAVAICIIAC CCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVVNRIVALLEVPARGVTFLQLAPGEYFFVSVKVAAYSGLLLATPFLLYQIARFVLPGL HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCC SVKERKLLGPVVLGSSLLFVAGLVFAYYLLIPAALNFFIRYGEGVVDQAWSIDRYFEFVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LLLFSTGLAFQVPILQALLGALGLVTAEQMFKGWRYVVLGAVVAGAILTPSTDPLTQSLL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AGAVTFLYLFGILLVKLLGK HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLASETESPEQAAAAPEPGRVRDPEFPYEVEMTLMEHLEELRSRLLASVIAVAICIIAC CCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVVNRIVALLEVPARGVTFLQLAPGEYFFVSVKVAAYSGLLLATPFLLYQIARFVLPGL HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCC SVKERKLLGPVVLGSSLLFVAGLVFAYYLLIPAALNFFIRYGEGVVDQAWSIDRYFEFVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LLLFSTGLAFQVPILQALLGALGLVTAEQMFKGWRYVVLGAVVAGAILTPSTDPLTQSLL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AGAVTFLYLFGILLVKLLGK HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]