Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is wzb [C]
Identifier: 86608386
GI number: 86608386
Start: 935939
End: 936439
Strand: Direct
Name: wzb [C]
Synonym: CYB_0906
Alternate gene names: 86608386
Gene position: 935939-936439 (Clockwise)
Preceding gene: 86608385
Following gene: 86608388
Centisome position: 30.72
GC content: 56.29
Gene sequence:
>501_bases ATGAGCCAAAAGCTTCTGTTTGTCTGTCTGGGTAACATCTGTCGCTCTCCCACTGCTGAGGGCATCACCAATCACCTTTT GCGCAGCAGCGGCCATAAGGAAGCAATTATCTGCGACTCAGCAGGTACGGCAGCCTATCACATCGGCAGCCCCCCAGATA GGCGCATGCAACAAGCAGCCCGATGCTATGGCCTAGAGCTACAAGGCAAGGCCCGCCAGATTCGACCTGCCGACCTGCGC GAGTTTGACCTGATCCTGGCTATGGATCGACAAAATTACCGCGACATTCTCAGCTTGGATCCCCAGGGAAAATATGCCGA GAAAGTGCGCCTGATGTGCAGCTATTGCCGCTCTCATTCTGACGAAGAAGTTCCGGATCCCTACTACGGGGGTGAGGCTG GATTCCATTACGTGATCGAGCTGCTCTGGGATGCCTGTAGCGGCTTGCTGGAATCCCTGGTTCCCGGGATCCAATGCCCA CCGTTGCCCCCCCGTGCTTGA
Upstream 100 bases:
>100_bases AGCGGCTCTTGGTGGAAAATAGAAAGGGAATCCGTCCCGCTGTTGCAGGCGGATACATCCTGTGGTGGGCCCACACATGG GATCCGATGGGGAGGTTGCC
Downstream 100 bases:
>100_bases GAGCTTGTGTGTTTATTTAAAGTTAATTCAAATGGCGATGAGACGGTAGCCAGTACAATAGCTCCGTTTGCGATAGTCAT TCCGAATAAGTCTGGGACAT
Product: low molecular weight phosphotyrosine protein phosphatase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSQKLLFVCLGNICRSPTAEGITNHLLRSSGHKEAIICDSAGTAAYHIGSPPDRRMQQAARCYGLELQGKARQIRPADLR EFDLILAMDRQNYRDILSLDPQGKYAEKVRLMCSYCRSHSDEEVPDPYYGGEAGFHYVIELLWDACSGLLESLVPGIQCP PLPPRA
Sequences:
>Translated_166_residues MSQKLLFVCLGNICRSPTAEGITNHLLRSSGHKEAIICDSAGTAAYHIGSPPDRRMQQAARCYGLELQGKARQIRPADLR EFDLILAMDRQNYRDILSLDPQGKYAEKVRLMCSYCRSHSDEEVPDPYYGGEAGFHYVIELLWDACSGLLESLVPGIQCP PLPPRA >Mature_165_residues SQKLLFVCLGNICRSPTAEGITNHLLRSSGHKEAIICDSAGTAAYHIGSPPDRRMQQAARCYGLELQGKARQIRPADLRE FDLILAMDRQNYRDILSLDPQGKYAEKVRLMCSYCRSHSDEEVPDPYYGGEAGFHYVIELLWDACSGLLESLVPGIQCPP LPPRA
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI4757714, Length=151, Percent_Identity=39.0728476821192, Blast_Score=104, Evalue=3e-23, Organism=Homo sapiens, GI6005988, Length=151, Percent_Identity=36.4238410596026, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI96304457, Length=79, Percent_Identity=43.0379746835443, Blast_Score=71, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6325330, Length=136, Percent_Identity=33.0882352941176, Blast_Score=89, Evalue=5e-19, Organism=Drosophila melanogaster, GI78706770, Length=153, Percent_Identity=35.2941176470588, Blast_Score=90, Evalue=8e-19, Organism=Drosophila melanogaster, GI78706772, Length=153, Percent_Identity=35.2941176470588, Blast_Score=90, Evalue=8e-19, Organism=Drosophila melanogaster, GI78706766, Length=153, Percent_Identity=33.3333333333333, Blast_Score=90, Evalue=8e-19, Organism=Drosophila melanogaster, GI78706768, Length=153, Percent_Identity=33.3333333333333, Blast_Score=90, Evalue=8e-19, Organism=Drosophila melanogaster, GI78711846, Length=153, Percent_Identity=35.2941176470588, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI78706764, Length=129, Percent_Identity=35.6589147286822, Blast_Score=86, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 18495; Mature: 18364
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKLLFVCLGNICRSPTAEGITNHLLRSSGHKEAIICDSAGTAAYHIGSPPDRRMQQAA CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCHHHHHHHHH RCYGLELQGKARQIRPADLREFDLILAMDRQNYRDILSLDPQGKYAEKVRLMCSYCRSHS HHHCCCCCCCCCCCCCCCCHHHHHEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC DEEVPDPYYGGEAGFHYVIELLWDACSGLLESLVPGIQCPPLPPRA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SQKLLFVCLGNICRSPTAEGITNHLLRSSGHKEAIICDSAGTAAYHIGSPPDRRMQQAA CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCHHHHHHHHH RCYGLELQGKARQIRPADLREFDLILAMDRQNYRDILSLDPQGKYAEKVRLMCSYCRSHS HHHCCCCCCCCCCCCCCCCHHHHHEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC DEEVPDPYYGGEAGFHYVIELLWDACSGLLESLVPGIQCPPLPPRA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]