Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608384
Identifier: 86608384
GI number: 86608384
Start: 934708
End: 935205
Strand: Direct
Name: 86608384
Synonym: CYB_0904
Alternate gene names: NA
Gene position: 934708-935205 (Clockwise)
Preceding gene: 86608383
Following gene: 86608385
Centisome position: 30.68
GC content: 60.44
Gene sequence:
>498_bases ATGGCTCCTTTGCAAGGACGACGCCGGCGGTTTTGGATTTGCAGCATGGTAGTCATCCTGGCCGGGTTTATGGGATCCCT GCTGGCGGGATCAGCGCAGAACCTGGGAGCACAAGCGCAGCAGGGCCTGACTCAAGCCCAACTGGAGCAAGCTCAATATG TGCGCAGTTGTGGCAGTTGCCATGTGGCGTTGCCCGCCCAAGTGTTGCCCACTGAAACCTGGCGACGGCTGCTGCAGGAT CCCAACCACTATGGCCAGCAGATCCAGCCCCTGAGCGGCGTGGCTTTACAACTGGCCTGGGGCTATTTGCGGCCCAACTC CCGGCCCCTGCGACAGGGGGAACAGGTGCCCTATCGCTTGGCAGATTCTCGCTATTTCCGTGCCCTGCATCTGCAAGTGG AGTTTCCCACTCCTGTGCGGGTGAGCGGCTGTGTGGATTGTCACCCCAGGGCCAATGGGGGGGATTTTGCCAGCCTCTCT GCAGAATGGCAATCTTGA
Upstream 100 bases:
>100_bases GTTGAGGCCGGATCTTATGGACTCCGTCCCACTGTGGCGAGCGGCCACCTGATCTAGAGTGGGTCTAGAGTGGGAAAGCA TGGGCAGTGGGTGTGAGAGC
Downstream 100 bases:
>100_bases GGAGCGCAACTGAGGCAATGCAGGTGGATCTGGCCACCATTTTGTCAGGCTATGCCCAAGGCTACTTTCTGATGGCCGAC GAAGAGACGGGATCCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAPLQGRRRRFWICSMVVILAGFMGSLLAGSAQNLGAQAQQGLTQAQLEQAQYVRSCGSCHVALPAQVLPTETWRRLLQD PNHYGQQIQPLSGVALQLAWGYLRPNSRPLRQGEQVPYRLADSRYFRALHLQVEFPTPVRVSGCVDCHPRANGGDFASLS AEWQS
Sequences:
>Translated_165_residues MAPLQGRRRRFWICSMVVILAGFMGSLLAGSAQNLGAQAQQGLTQAQLEQAQYVRSCGSCHVALPAQVLPTETWRRLLQD PNHYGQQIQPLSGVALQLAWGYLRPNSRPLRQGEQVPYRLADSRYFRALHLQVEFPTPVRVSGCVDCHPRANGGDFASLS AEWQS >Mature_164_residues APLQGRRRRFWICSMVVILAGFMGSLLAGSAQNLGAQAQQGLTQAQLEQAQYVRSCGSCHVALPAQVLPTETWRRLLQDP NHYGQQIQPLSGVALQLAWGYLRPNSRPLRQGEQVPYRLADSRYFRALHLQVEFPTPVRVSGCVDCHPRANGGDFASLSA EWQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18330; Mature: 18199
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLQGRRRRFWICSMVVILAGFMGSLLAGSAQNLGAQAQQGLTQAQLEQAQYVRSCGSC CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHCHHHHHHHHHHHHHHCCCC HVALPAQVLPTETWRRLLQDPNHYGQQIQPLSGVALQLAWGYLRPNSRPLRQGEQVPYRL EEECCCHHCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEH ADSRYFRALHLQVEFPTPVRVSGCVDCHPRANGGDFASLSAEWQS HCCCEEEEEEEEEECCCCEEECCCEECCCCCCCCCEEECCCCCCC >Mature Secondary Structure APLQGRRRRFWICSMVVILAGFMGSLLAGSAQNLGAQAQQGLTQAQLEQAQYVRSCGSC CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHCHHHHHHHHHHHHHHCCCC HVALPAQVLPTETWRRLLQDPNHYGQQIQPLSGVALQLAWGYLRPNSRPLRQGEQVPYRL EEECCCHHCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEH ADSRYFRALHLQVEFPTPVRVSGCVDCHPRANGGDFASLSAEWQS HCCCEEEEEEEEEECCCCEEECCCEECCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA