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The map label for this gene is appB [H]

Identifier: 86608332

GI number: 86608332

Start: 883063

End: 884091

Strand: Reverse

Name: appB [H]

Synonym: CYB_0850

Alternate gene names: 86608332

Gene position: 884091-883063 (Counterclockwise)

Preceding gene: 86608334

Following gene: 86608330

Centisome position: 29.02

GC content: 60.35

Gene sequence:

>1029_bases
GTGGCTGTAACCTCTTCTCCGCCTTCCCGTTCCCGCGCTTTTGGCCTTTGGCCGCCGCTGGCCTTGGTTTTGCAGCGGCT
GACCCAAGCGGTGCCGGTGCTGCTGTTGATCACGGTGCTCAGCTTTTTGCTCTTGCAGCTGGCCCCCGGAGATTTTTTGG
ATCCCTTGCGGGCGGATCCCAGTGTCAGCCAGGAGTTTATTGCCCAAGAGGAAGCGCGGCTGGGGTTGGATAAGCCCTTG
GTTTGGCAGTATTTGACCTGGCTGGGCAACCTGCTGCAAGGGGATTTCGGGGTGAGCTACACCTATCGCGTGCCGGTAGC
ACAGCTCATCCTCTCCCGCGCCGGCGCTACCTTGCTGTTGGCGGTGTCCTCTGTGGTGCTGACTTGGCTGGTCGCCATTC
CCCTAGGGATCCTGGGGGCGCTGCGGCAGAACACCCCCCTGGATCGGGCGTTGCAGTTGCTCAGCTACCTGGGCCAGGCC
ATGCCCAGCTTCGTGCTGGCCATTTTGCTGCTAATTGTGGCCCAAAACGTGAGCTGGCTGCCGGTAGGGGGGATGACCAG
TGTTTATTTTGCCGAGCTTAGTTTGGGGGAAAAGTTGCTGGATCTGGGCCGCCACCTGCTCCTGCCCACGCTGGCCCTGA
GCATCACCAGCTTTGCCGGGCTGCAGCGGATTACGCGCGGCAATTTCTTGGATGTGCTGCGGCAGGAATACATCCAGGCG
GCGCGGGCCCGTGGGATCCCAGAGTGGCGGGTGATCTGGTTGCACGCGCTGCGCAACGCCGTCAACCCCTTGATCACGAT
CTTGGGCTTTGAGTTTGCCAATCTGCTCAGCGGCTCTTTTATTGCCGAGTTTTTCTTCAATTGGCCGGGGCTGGGCAAGC
TGCTCTTGGAGGCTGTTCAAAGTTTCGACATCAATGTGGTGATGGCGGGGCTTCTGCTGGGGGCCGTGATGCTCATTCTG
GGCAATTTGTTGGCCGATTTGCTCCTGATGTGGGTGGATCCCCGGATCCGACCCGACTCACTGCTGTAG

Upstream 100 bases:

>100_bases
GGCTTGGCAAACCCCACACTGGAAATTTGCCCGCAAGGATGTCAGCATAGTTCGACAAGAATCCAACTCAAAGAGCATAT
CCGAATATCCATCTGCATCT

Downstream 100 bases:

>100_bases
TTAACCATTGCTGCTACGGATCCCTCAAACAGGCGGCTCAATTGTGGAGACAATATCCCGAATCACCGCCTCAGCCTCTT
GCCGTCGGTTGCCGGCCATC

Product: OppBC ABC transporter family permease

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MAVTSSPPSRSRAFGLWPPLALVLQRLTQAVPVLLLITVLSFLLLQLAPGDFLDPLRADPSVSQEFIAQEEARLGLDKPL
VWQYLTWLGNLLQGDFGVSYTYRVPVAQLILSRAGATLLLAVSSVVLTWLVAIPLGILGALRQNTPLDRALQLLSYLGQA
MPSFVLAILLLIVAQNVSWLPVGGMTSVYFAELSLGEKLLDLGRHLLLPTLALSITSFAGLQRITRGNFLDVLRQEYIQA
ARARGIPEWRVIWLHALRNAVNPLITILGFEFANLLSGSFIAEFFFNWPGLGKLLLEAVQSFDINVVMAGLLLGAVMLIL
GNLLADLLLMWVDPRIRPDSLL

Sequences:

>Translated_342_residues
MAVTSSPPSRSRAFGLWPPLALVLQRLTQAVPVLLLITVLSFLLLQLAPGDFLDPLRADPSVSQEFIAQEEARLGLDKPL
VWQYLTWLGNLLQGDFGVSYTYRVPVAQLILSRAGATLLLAVSSVVLTWLVAIPLGILGALRQNTPLDRALQLLSYLGQA
MPSFVLAILLLIVAQNVSWLPVGGMTSVYFAELSLGEKLLDLGRHLLLPTLALSITSFAGLQRITRGNFLDVLRQEYIQA
ARARGIPEWRVIWLHALRNAVNPLITILGFEFANLLSGSFIAEFFFNWPGLGKLLLEAVQSFDINVVMAGLLLGAVMLIL
GNLLADLLLMWVDPRIRPDSLL
>Mature_341_residues
AVTSSPPSRSRAFGLWPPLALVLQRLTQAVPVLLLITVLSFLLLQLAPGDFLDPLRADPSVSQEFIAQEEARLGLDKPLV
WQYLTWLGNLLQGDFGVSYTYRVPVAQLILSRAGATLLLAVSSVVLTWLVAIPLGILGALRQNTPLDRALQLLSYLGQAM
PSFVLAILLLIVAQNVSWLPVGGMTSVYFAELSLGEKLLDLGRHLLLPTLALSITSFAGLQRITRGNFLDVLRQEYIQAA
RARGIPEWRVIWLHALRNAVNPLITILGFEFANLLSGSFIAEFFFNWPGLGKLLLEAVQSFDINVVMAGLLLGAVMLILG
NLLADLLLMWVDPRIRPDSLL

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=37.5, Blast_Score=204, Evalue=7e-54,
Organism=Escherichia coli, GI1787053, Length=321, Percent_Identity=37.0716510903427, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1787497, Length=320, Percent_Identity=32.8125, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1789888, Length=321, Percent_Identity=35.5140186915888, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1788504, Length=359, Percent_Identity=30.08356545961, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=32.7327327327327, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=29.1044776119403, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37548; Mature: 37417

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTSSPPSRSRAFGLWPPLALVLQRLTQAVPVLLLITVLSFLLLQLAPGDFLDPLRADP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SVSQEFIAQEEARLGLDKPLVWQYLTWLGNLLQGDFGVSYTYRVPVAQLILSRAGATLLL
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCHHHHH
AVSSVVLTWLVAIPLGILGALRQNTPLDRALQLLSYLGQAMPSFVLAILLLIVAQNVSWL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
PVGGMTSVYFAELSLGEKLLDLGRHLLLPTLALSITSFAGLQRITRGNFLDVLRQEYIQA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ARARGIPEWRVIWLHALRNAVNPLITILGFEFANLLSGSFIAEFFFNWPGLGKLLLEAVQ
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SFDINVVMAGLLLGAVMLILGNLLADLLLMWVDPRIRPDSLL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AVTSSPPSRSRAFGLWPPLALVLQRLTQAVPVLLLITVLSFLLLQLAPGDFLDPLRADP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC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HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]