| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608309
Identifier: 86608309
GI number: 86608309
Start: 858031
End: 858567
Strand: Reverse
Name: 86608309
Synonym: CYB_0827
Alternate gene names: NA
Gene position: 858567-858031 (Counterclockwise)
Preceding gene: 86608316
Following gene: 86608308
Centisome position: 28.18
GC content: 58.47
Gene sequence:
>537_bases ATGGGGATAGAGGGTAGGCAGTGCTACAGTTGGCCTATAGGGTATCCTTTTGACGTTAGCTCAAAACGCTCCTCTGAATC TTTCCTGCCGCCGATGTATTCTCTGCTGCTTACCTATGGTCTTAACCCGCTGACAGGCTTAAAGCTGTTGGTCAAGTCCT CTGAGCAGACCTCTCTGTGGACACTGGCCCAGCAGCTTTGGGGCCGCCCCGGATCTCGGCGACGCAGGCCGCGCCTACAA ATCTCGTTAGGCCGCTTGGTGCCAGAGCAAACCGAGCACTTGTCCAAGTTGGAAGTGCTGCTGCGTCTGCGGTTTTTCAT TGCCCTCGAAGCGGAAACTCAAGAGAGTGCTGCCCACCACTGTCGCGAACGGTTCTTGCTTCCTTCCGGCCAGGGATCTG CCATTCAGCTTGCCCGCTACACCGAGGGCTCGCAGCAGTACAAGACGGAGATCATCCGCTTTGCCCTGGGGGGATCCCGC ACCCTTGTTGCAAGAACTCCATCCCGCTGCCGTGAACGGCGCCGCCGTCGCCCCTGA
Upstream 100 bases:
>100_bases CCCCACTGCCTCGGCCAAGCTCTGGGCAGCCAACTTGTCCACCGGATGAAACAGCCAGCGTTGAGCAGGGATCCCGGCCA TAGGGAAGGGTGGGGCTTGG
Downstream 100 bases:
>100_bases AGCAAACTCCCCAACAAGCCATAGCGATAGAGTCTTGCCGGCCTGTCTATACTGGAGATGCACTAGATCTGTGTTTCTCC CGTGAACCCAACTGGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MGIEGRQCYSWPIGYPFDVSSKRSSESFLPPMYSLLLTYGLNPLTGLKLLVKSSEQTSLWTLAQQLWGRPGSRRRRPRLQ ISLGRLVPEQTEHLSKLEVLLRLRFFIALEAETQESAAHHCRERFLLPSGQGSAIQLARYTEGSQQYKTEIIRFALGGSR TLVARTPSRCRERRRRRP
Sequences:
>Translated_178_residues MGIEGRQCYSWPIGYPFDVSSKRSSESFLPPMYSLLLTYGLNPLTGLKLLVKSSEQTSLWTLAQQLWGRPGSRRRRPRLQ ISLGRLVPEQTEHLSKLEVLLRLRFFIALEAETQESAAHHCRERFLLPSGQGSAIQLARYTEGSQQYKTEIIRFALGGSR TLVARTPSRCRERRRRRP >Mature_177_residues GIEGRQCYSWPIGYPFDVSSKRSSESFLPPMYSLLLTYGLNPLTGLKLLVKSSEQTSLWTLAQQLWGRPGSRRRRPRLQI SLGRLVPEQTEHLSKLEVLLRLRFFIALEAETQESAAHHCRERFLLPSGQGSAIQLARYTEGSQQYKTEIIRFALGGSRT LVARTPSRCRERRRRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20474; Mature: 20343
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEGRQCYSWPIGYPFDVSSKRSSESFLPPMYSLLLTYGLNPLTGLKLLVKSSEQTSLW CCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH TLAQQLWGRPGSRRRRPRLQISLGRLVPEQTEHLSKLEVLLRLRFFIALEAETQESAAHH HHHHHHHCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH CRERFLLPSGQGSAIQLARYTEGSQQYKTEIIRFALGGSRTLVARTPSRCRERRRRRP HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCC >Mature Secondary Structure GIEGRQCYSWPIGYPFDVSSKRSSESFLPPMYSLLLTYGLNPLTGLKLLVKSSEQTSLW CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH TLAQQLWGRPGSRRRRPRLQISLGRLVPEQTEHLSKLEVLLRLRFFIALEAETQESAAHH HHHHHHHCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH CRERFLLPSGQGSAIQLARYTEGSQQYKTEIIRFALGGSRTLVARTPSRCRERRRRRP HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA