| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is fdx [C]
Identifier: 86608297
GI number: 86608297
Start: 844279
End: 844764
Strand: Direct
Name: fdx [C]
Synonym: CYB_0815
Alternate gene names: 86608297
Gene position: 844279-844764 (Clockwise)
Preceding gene: 86608291
Following gene: 86608298
Centisome position: 27.71
GC content: 58.64
Gene sequence:
>486_bases ATGGTCAAGCGTGTGCGGTTGGATCCCATTGCCCAAGTGTCTGAAATCGCCACCAACAGCAATTTGCTCTCGGTGCTGCT GCAAGAAGAGCTGAATGTGTTGAAAGAGTGCGGTGGGCGCGGCCTCTGCGCCACCTGTCATGTGTACGTTAAGGAGGGGA TGGAGTCTTTATCCCCGATGAGCAAGCGGGAGCAGCGCACCCTGGAGGTGATCACCACCTGCAAGCCTAACTCTCGCTTG GCCTGCCAAGCGCGGGTGCTGGGGGAAGGGGTGGTGGTGGAATTGCCTGCCGGGATGTACATCCATGCTTTTCAGGATAT CGAGGCGTTGATCGGTCGGCGAGCGGAGCAGCCACTTTTGCACCCTGTAACCGGCGCGGTTTTGGTGCAGGAGGGCAAGC TGATCACCCGCTCGGTGCTGGAATCGGTGAGAGGGCTGGATCTGGATATCCAAGAAGCACTGGCTCGGAGCAGCCAGGAG TTTTGA
Upstream 100 bases:
>100_bases ATTTTCCTGCATGCTTAGGTAGAACTGCCCTGTTCCGGCAATCTGCATTGGTGAAAGATGCTAGCTTTTTTAGCATCCAG TAGCCCAAAAAGTGCGGACT
Downstream 100 bases:
>100_bases GATTTTGATCCCATCTTTTGAGCCAGTTTGGGCCCCTTTTTGAGGCCACTTGGCCACCCCGTATATAAACAAAGCATTCT CAGGTGAGTATTCCTATGCC
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: Ferredoxin 2Fe-2S Type; 2Fe-2S Ferredoxin
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MVKRVRLDPIAQVSEIATNSNLLSVLLQEELNVLKECGGRGLCATCHVYVKEGMESLSPMSKREQRTLEVITTCKPNSRL ACQARVLGEGVVVELPAGMYIHAFQDIEALIGRRAEQPLLHPVTGAVLVQEGKLITRSVLESVRGLDLDIQEALARSSQE F
Sequences:
>Translated_161_residues MVKRVRLDPIAQVSEIATNSNLLSVLLQEELNVLKECGGRGLCATCHVYVKEGMESLSPMSKREQRTLEVITTCKPNSRL ACQARVLGEGVVVELPAGMYIHAFQDIEALIGRRAEQPLLHPVTGAVLVQEGKLITRSVLESVRGLDLDIQEALARSSQE F >Mature_161_residues MVKRVRLDPIAQVSEIATNSNLLSVLLQEELNVLKECGGRGLCATCHVYVKEGMESLSPMSKREQRTLEVITTCKPNSRL ACQARVLGEGVVVELPAGMYIHAFQDIEALIGRRAEQPLLHPVTGAVLVQEGKLITRSVLESVRGLDLDIQEALARSSQE F
Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788874, Length=95, Percent_Identity=35.7894736842105, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17679; Mature: 17679
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRVRLDPIAQVSEIATNSNLLSVLLQEELNVLKECGGRGLCATCHVYVKEGMESLSPM CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH SKREQRTLEVITTCKPNSRLACQARVLGEGVVVELPAGMYIHAFQDIEALIGRRAEQPLL HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHCCCCCCCCC HPVTGAVLVQEGKLITRSVLESVRGLDLDIQEALARSSQEF CCCCHHEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MVKRVRLDPIAQVSEIATNSNLLSVLLQEELNVLKECGGRGLCATCHVYVKEGMESLSPM CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH SKREQRTLEVITTCKPNSRLACQARVLGEGVVVELPAGMYIHAFQDIEALIGRRAEQPLL HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHCCCCCCCCC HPVTGAVLVQEGKLITRSVLESVRGLDLDIQEALARSSQEF CCCCHHEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: 2Fe-2S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA