| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is mrr [H]
Identifier: 86608284
GI number: 86608284
Start: 827618
End: 828547
Strand: Reverse
Name: mrr [H]
Synonym: CYB_0801
Alternate gene names: 86608284
Gene position: 828547-827618 (Counterclockwise)
Preceding gene: 86608285
Following gene: 86608278
Centisome position: 27.2
GC content: 46.56
Gene sequence:
>930_bases ATGGCCGTTCCCGATTATCAGAGCTTGATGTTGCCACTTCTCCAGTTTGCAGCACGTAAAGAAACCGAAATATCAACCAG CGAAGCTGTTGAAGTTCTGGCAAAGGAACTGGGCCTCACAGAGGACGATCTCAGGGAGATGCTGCCGAGCGGTGTACAGC CAACCTTTGTCAATCGCGTCGGCTGGGCTGCAACTTATATGAAAAAGGCAGGGCTGCTGGAAACAACGCGCAGAGGATTC TACCAAATTACTGACCGCGGAAGAGATCTTCTTGAAAAACAGCCCAAAACCATCAATGTAGAGTTACTCAGGCAATATCC TGAATTCCGAGAATTTGAGGGGCCCAAAGACACAAGAAGCAGCAACAAGGCAAGCAAACAAAAAGCTTTATCAGAGACTT CGGCAGCGACACCATTAGAACAGTTAGAAGCTGCATATGAAAGTCTCCGTGACAAACTGGCTGATGAACTGCTTGCCAAG CTAAAGAAAGTATCGCCCGCCTTCTTCGAAAAGGTTGTTGTGGAGCTGCTGGTTAAAATGGGCTACGGAGGCTCACGGGC AGATGCAGGCAAAGCAATTGGCAAGAGTGGCGATGGTGGAATTGATGGGATCATCAAAGAGGACAAACTCGGTCTTGATG TTGTGTATATTCAGGCAAAGCGTTGGGATAGCAATCCGGTAGGTCGTCCTGATGTCATGCAGTTTGTGGGTGCTTTACAG GCTCAAAGAGCAAACAAGGGTATTTTTATCACTACCTCCAGGTTTACTGAAGACGCTAGCAGCTACGTTTCGCAGATCGG CAGTAAGATTGTTTTGATTGACGGCGAACAACTAACAAATCTAATGATTGAGCACGACGTTGGCGTATCTACAGTTTCAT TGTATCCGGTAAAGAAGATTGATAGTGATTATTTTGAAGAGAGCATCTAA
Upstream 100 bases:
>100_bases CTGGCGGATACCCTAACTGGCTTGCAGCAGAGGGTTGGCGTAAAGTTATGGGTGGAACCTACTTCGGTTTGGGATCCCTG TCTTCACATCGGTTCTACAA
Downstream 100 bases:
>100_bases CATCGGAGTGAGAAAATTGAGCTGCTAGGGCCAGCAGAGTTAACACAAGGAGCAAAGCTAGCAAAGTTCATGTAGTGCCA TCGCCTTCTTAAGTATGGGC
Product: mrr restriction system protein
Products: NA
Alternate protein names: EcoKMrr [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MAVPDYQSLMLPLLQFAARKETEISTSEAVEVLAKELGLTEDDLREMLPSGVQPTFVNRVGWAATYMKKAGLLETTRRGF YQITDRGRDLLEKQPKTINVELLRQYPEFREFEGPKDTRSSNKASKQKALSETSAATPLEQLEAAYESLRDKLADELLAK LKKVSPAFFEKVVVELLVKMGYGGSRADAGKAIGKSGDGGIDGIIKEDKLGLDVVYIQAKRWDSNPVGRPDVMQFVGALQ AQRANKGIFITTSRFTEDASSYVSQIGSKIVLIDGEQLTNLMIEHDVGVSTVSLYPVKKIDSDYFEESI
Sequences:
>Translated_309_residues MAVPDYQSLMLPLLQFAARKETEISTSEAVEVLAKELGLTEDDLREMLPSGVQPTFVNRVGWAATYMKKAGLLETTRRGF YQITDRGRDLLEKQPKTINVELLRQYPEFREFEGPKDTRSSNKASKQKALSETSAATPLEQLEAAYESLRDKLADELLAK LKKVSPAFFEKVVVELLVKMGYGGSRADAGKAIGKSGDGGIDGIIKEDKLGLDVVYIQAKRWDSNPVGRPDVMQFVGALQ AQRANKGIFITTSRFTEDASSYVSQIGSKIVLIDGEQLTNLMIEHDVGVSTVSLYPVKKIDSDYFEESI >Mature_308_residues AVPDYQSLMLPLLQFAARKETEISTSEAVEVLAKELGLTEDDLREMLPSGVQPTFVNRVGWAATYMKKAGLLETTRRGFY QITDRGRDLLEKQPKTINVELLRQYPEFREFEGPKDTRSSNKASKQKALSETSAATPLEQLEAAYESLRDKLADELLAKL KKVSPAFFEKVVVELLVKMGYGGSRADAGKAIGKSGDGGIDGIIKEDKLGLDVVYIQAKRWDSNPVGRPDVMQFVGALQA QRANKGIFITTSRFTEDASSYVSQIGSKIVLIDGEQLTNLMIEHDVGVSTVSLYPVKKIDSDYFEESI
Specific function: Involved in the acceptance of foreign DNA which is modified. Restricts both adenine- and cytosine-methylated DNA [H]
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790811, Length=319, Percent_Identity=38.871473354232, Blast_Score=188, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011856 - InterPro: IPR011335 - InterPro: IPR007560 [H]
Pfam domain/function: PF04471 Mrr_cat [H]
EC number: NA
Molecular weight: Translated: 34225; Mature: 34094
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPDYQSLMLPLLQFAARKETEISTSEAVEVLAKELGLTEDDLREMLPSGVQPTFVNRV CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHH GWAATYMKKAGLLETTRRGFYQITDRGRDLLEKQPKTINVELLRQYPEFREFEGPKDTRS HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCHHHHHCCCCCCCCC SNKASKQKALSETSAATPLEQLEAAYESLRDKLADELLAKLKKVSPAFFEKVVVELLVKM CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GYGGSRADAGKAIGKSGDGGIDGIIKEDKLGLDVVYIQAKRWDSNPVGRPDVMQFVGALQ CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH AQRANKGIFITTSRFTEDASSYVSQIGSKIVLIDGEQLTNLMIEHDVGVSTVSLYPVKKI HHHCCCCEEEEECHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCEEEEECCHHHH DSDYFEESI CHHHHHCCC >Mature Secondary Structure AVPDYQSLMLPLLQFAARKETEISTSEAVEVLAKELGLTEDDLREMLPSGVQPTFVNRV CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHH GWAATYMKKAGLLETTRRGFYQITDRGRDLLEKQPKTINVELLRQYPEFREFEGPKDTRS HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCHHHHHCCCCCCCCC SNKASKQKALSETSAATPLEQLEAAYESLRDKLADELLAKLKKVSPAFFEKVVVELLVKM CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GYGGSRADAGKAIGKSGDGGIDGIIKEDKLGLDVVYIQAKRWDSNPVGRPDVMQFVGALQ CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH AQRANKGIFITTSRFTEDASSYVSQIGSKIVLIDGEQLTNLMIEHDVGVSTVSLYPVKKI HHHCCCCEEEEECHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCEEEEECCHHHH DSDYFEESI CHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650347; 7610040; 9278503 [H]