The gene/protein map for NC_007776 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86608282

Identifier: 86608282

GI number: 86608282

Start: 824573

End: 825922

Strand: Direct

Name: 86608282

Synonym: CYB_0798

Alternate gene names: NA

Gene position: 824573-825922 (Clockwise)

Preceding gene: 86608281

Following gene: 86608283

Centisome position: 27.06

GC content: 45.26

Gene sequence:

>1350_bases
ATGACTGCGGCTAGCTCTCTCCGAGAGAAGCTTGAGAGGATATCTCCCACCGAGAGGGTAGAGCGAGTTGTTGTCCAACA
CTTTGCTTCTCCTCTCCTGCAGGCGCTTGGCTTTGACGACTTGGAAATTAGATATGAATTCGAGACAGGTTGTGGCCAGG
TCGACCTCGCCGCAAGAAAGAACGAAGATCCTGAAGATACTTTCTTTAACTCCCAAAGGAACCCCTACTTGCTTTTGGAG
GCAAAATCCAGAGTAGTCAACCTCAAAGAAGGATCTTACTATAGGGATGCAGTTTGTCAAATAGAAAGCTACCTGCTCGG
CGAGAACTGCAAATCTGCAAAATGGGGAATTATCACCAATGCAAACAACATCCAGATCTGGAGGAAGCATGGAAAAGTCG
TCCACCCTGCTACAGCAAACTTCTCCATTAATCCAGATAACATTGAGAGCATAGTGCGTAACTTGCGAGACAAGATAGAA
AACTATGAACGCGCTCTGACTGTATGCGTGTATAACAATAAAGGGGGCGTAGGCAAAACAACGACGGTCATTAACCTTGC
AGCAGCACTAAAAACCAAGGGAAAAAAGGTCTTAGTTGTTGACTTTGATTCTCAGGGTGATCTGACAAGAAGTTTGGGAG
CCACTCCTGGAAAAATTACACTGACGCAATGTTTAAAGGATCCCAAAATAGACATCCATGCCATTGTCCAAACATATAGA
CTCAAATATAGACTCAAAGGCAAGCAGACTACCCTTCCCATCTTCGACATTATCCCAAGAGACCCTGAGCTGGAGACGTT
GACCGACAGCCAGTCGCTAGCATATATCCAAAAGGGAACCCGACGCCTTCGAGATCTGATTGCCCCTCTTCGCAATGAGT
ATGATTACATCCTAATCGACTGCCCAACTCAATGGCTTTACTTCAGCCAAAGTGGTGTTTTTGCTGCCGATGTTATTTTG
ATACCTACCCGCCCCGACGATCTGTCTTCCCTGAATAATGCTGCTAGAGTAATCACCAGCTTTGTTCCAGAAACTGCTAA
GTCACGACAGGATGGCGGCCCCAGGACTTTGCCTATCTTTTTCAACGGCGTTTCTTCGGGAAGTGAATACACTATTCAAC
TAGCTAACGAAGAGATAGGTAAGCTTATCGACCAGGAGAAAAGTGTAGATCTACGTCCATATTTCTGGCCGCATTTTAAG
AAAGGTAATGAAAACAAAAGCATTTTTAGGATACCTGACTATGCAGTGATATCCTCTGCAAGCTTTGATCGAACTCCTGC
CGTCTTTAGGGACAGGAGAGTTTTAGAATACTACCAGAGTCTTGCCCGTGAGTACTTTATCGATGAGTGA

Upstream 100 bases:

>100_bases
CAGCCCAAGCACTAGCAGAACGAGCCAAGCAACTGCTATGCTGAGGGCGAGCTTTTAGCTTGGTTAGCATTGTCCACCTT
ATTTTTTCCTATTTTTTCCT

Downstream 100 bases:

>100_bases
GTTTTCAGATCTAGGTAGGTTGGTTAACTTACCCCTTGAGAGCATTACGCCCGCCGATGGGTTTTCTGCTCCCTCCTTCC
TTGTTGCCGCAGCCGCAGAT

Product: CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MTAASSLREKLERISPTERVERVVVQHFASPLLQALGFDDLEIRYEFETGCGQVDLAARKNEDPEDTFFNSQRNPYLLLE
AKSRVVNLKEGSYYRDAVCQIESYLLGENCKSAKWGIITNANNIQIWRKHGKVVHPATANFSINPDNIESIVRNLRDKIE
NYERALTVCVYNNKGGVGKTTTVINLAAALKTKGKKVLVVDFDSQGDLTRSLGATPGKITLTQCLKDPKIDIHAIVQTYR
LKYRLKGKQTTLPIFDIIPRDPELETLTDSQSLAYIQKGTRRLRDLIAPLRNEYDYILIDCPTQWLYFSQSGVFAADVIL
IPTRPDDLSSLNNAARVITSFVPETAKSRQDGGPRTLPIFFNGVSSGSEYTIQLANEEIGKLIDQEKSVDLRPYFWPHFK
KGNENKSIFRIPDYAVISSASFDRTPAVFRDRRVLEYYQSLAREYFIDE

Sequences:

>Translated_449_residues
MTAASSLREKLERISPTERVERVVVQHFASPLLQALGFDDLEIRYEFETGCGQVDLAARKNEDPEDTFFNSQRNPYLLLE
AKSRVVNLKEGSYYRDAVCQIESYLLGENCKSAKWGIITNANNIQIWRKHGKVVHPATANFSINPDNIESIVRNLRDKIE
NYERALTVCVYNNKGGVGKTTTVINLAAALKTKGKKVLVVDFDSQGDLTRSLGATPGKITLTQCLKDPKIDIHAIVQTYR
LKYRLKGKQTTLPIFDIIPRDPELETLTDSQSLAYIQKGTRRLRDLIAPLRNEYDYILIDCPTQWLYFSQSGVFAADVIL
IPTRPDDLSSLNNAARVITSFVPETAKSRQDGGPRTLPIFFNGVSSGSEYTIQLANEEIGKLIDQEKSVDLRPYFWPHFK
KGNENKSIFRIPDYAVISSASFDRTPAVFRDRRVLEYYQSLAREYFIDE
>Mature_448_residues
TAASSLREKLERISPTERVERVVVQHFASPLLQALGFDDLEIRYEFETGCGQVDLAARKNEDPEDTFFNSQRNPYLLLEA
KSRVVNLKEGSYYRDAVCQIESYLLGENCKSAKWGIITNANNIQIWRKHGKVVHPATANFSINPDNIESIVRNLRDKIEN
YERALTVCVYNNKGGVGKTTTVINLAAALKTKGKKVLVVDFDSQGDLTRSLGATPGKITLTQCLKDPKIDIHAIVQTYRL
KYRLKGKQTTLPIFDIIPRDPELETLTDSQSLAYIQKGTRRLRDLIAPLRNEYDYILIDCPTQWLYFSQSGVFAADVILI
PTRPDDLSSLNNAARVITSFVPETAKSRQDGGPRTLPIFFNGVSSGSEYTIQLANEEIGKLIDQEKSVDLRPYFWPHFKK
GNENKSIFRIPDYAVISSASFDRTPAVFRDRRVLEYYQSLAREYFIDE

Specific function: Unknown

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 50966; Mature: 50835

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAASSLREKLERISPTERVERVVVQHFASPLLQALGFDDLEIRYEFETGCGQVDLAARK
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHCC
NEDPEDTFFNSQRNPYLLLEAKSRVVNLKEGSYYRDAVCQIESYLLGENCKSAKWGIITN
CCCCCHHHHCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEC
ANNIQIWRKHGKVVHPATANFSINPDNIESIVRNLRDKIENYERALTVCVYNNKGGVGKT
CCCEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCH
TTVINLAAALKTKGKKVLVVDFDSQGDLTRSLGATPGKITLTQCLKDPKIDIHAIVQTYR
HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHH
LKYRLKGKQTTLPIFDIIPRDPELETLTDSQSLAYIQKGTRRLRDLIAPLRNEYDYILID
EEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
CPTQWLYFSQSGVFAADVILIPTRPDDLSSLNNAARVITSFVPETAKSRQDGGPRTLPIF
CCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEE
FNGVSSGSEYTIQLANEEIGKLIDQEKSVDLRPYFWPHFKKGNENKSIFRIPDYAVISSA
EECCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHEEECC
SFDRTPAVFRDRRVLEYYQSLAREYFIDE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAASSLREKLERISPTERVERVVVQHFASPLLQALGFDDLEIRYEFETGCGQVDLAARK
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHCC
NEDPEDTFFNSQRNPYLLLEAKSRVVNLKEGSYYRDAVCQIESYLLGENCKSAKWGIITN
CCCCCHHHHCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEC
ANNIQIWRKHGKVVHPATANFSINPDNIESIVRNLRDKIENYERALTVCVYNNKGGVGKT
CCCEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCH
TTVINLAAALKTKGKKVLVVDFDSQGDLTRSLGATPGKITLTQCLKDPKIDIHAIVQTYR
HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHH
LKYRLKGKQTTLPIFDIIPRDPELETLTDSQSLAYIQKGTRRLRDLIAPLRNEYDYILID
EEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
CPTQWLYFSQSGVFAADVILIPTRPDDLSSLNNAARVITSFVPETAKSRQDGGPRTLPIF
CCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEE
FNGVSSGSEYTIQLANEEIGKLIDQEKSVDLRPYFWPHFKKGNENKSIFRIPDYAVISSA
EECCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHEEECC
SFDRTPAVFRDRRVLEYYQSLAREYFIDE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]