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The map label for this gene is mtrC [H]

Identifier: 86608202

GI number: 86608202

Start: 734882

End: 736180

Strand: Direct

Name: mtrC [H]

Synonym: CYB_0717

Alternate gene names: 86608202

Gene position: 734882-736180 (Clockwise)

Preceding gene: 86608201

Following gene: 86608203

Centisome position: 24.12

GC content: 65.67

Gene sequence:

>1299_bases
ATGCAACTGCGAACAGCTCTGCCGCTGTTGTGCCTTTCTCTCTTGGTAGCTGCTTGCCGGCCCGGCGGGCCACCTCGCAG
CATGGGGGGTGAAGGGGGCGGAGAAGGCCAACCCACACCAGTGGCCGTCGGCAGGGTAGAGGAACAGCAAATCGAAGAGA
CTTCAGAGTTCATGGCCAGCCTCGGATCCCAGCAGGTGGCCAGTATCCGCCCTCAGGTCAGTGGACAGGTGACCCAGGTG
TTCGTGCAGCTGGGATCCCAGGTGGCTGCCGGAGCCCCTCTCTTTGAGATCGACAGCCGGCAGCAACAGGCGGCGGTGGC
CGGCCAAACGGCGGGGATTGCCGCAGCCCAAGCCAACCTGGAGAGCGGCCGGGCCGTGCTCAGCCAGTTGCGGGCGGATC
GGCTGCGGCTGGAGGCAGCGGCGGAGTTTGCCCGGGAGCAGCACGAGCGCAACCTGCGCCTCTTGGCCGAGGGGGCCATC
AGCCAGGCGCAAGCGGATCAATCCAGCCGCGACCTGCGCCAGGCGGAGGCGGCTTTGGCGGCGCAACAGGAGCAGATCCG
CGCTCAGGAGGCCGCGATCTTGCGGGCAGAGCGGGAGGTGCAGCGAGCCCAGGCCGAGGCGGAGCGGCAACAGGTGCAAC
TGCAGTTTTTCCAGGTTACAGCTCCCTTTGCCGGCATTGTGGGGGATGTTTTGGTGCGGCAAGGGGACTACGTGACGCCT
CAGACGGTTTTGACCACCTTGACCCAAACCCAGGCGCTGGAGCTCAACCTCAACATCCCGTTGCAGCGGGCCCCCCAGCT
GCGCATTGGCACGCCGGTGCAGATCCTGGATAGCCGCGGCGAGGTGATCGGCAGCAGCCAAATCTCTTTCATTGCTCCCG
AAGCCAACGCCGCCACGCAATCGGTGCTGGCCAAGGCTCTTCTGGAGAACCCTGCCGGCCAGTTGCGCTCGGCCCAGTTT
GTGCGGACTCGGGTCATCTGGGAGGAGCGGCCGGCCTTGCTGGTGCCGGTGACGGCGGTGGCCCGCTTGGGGGCGCAAAC
CTTTGTCTACACGGTGCAGACAACGGAGCCGCCAGCAGAGGGCATGCCCCCGGGGGCGGTGGCGGTGCAAAGGCCGGTGC
AGCTGGGATCCATCTACGGAAACAGCTATGAGGTGCTGGAGGGTTTGGAGGCCAATGAGCCAATTGTGCTGAGCGGCCTG
CAGAAAATCCGCGATGGCGCCCCGATTGTCGATGAGGTGCTTTTTCAGCAGAGGATGCAGCCACAAGGGGGAGGGAGACC
TCCTGGATCCCCGCCCTAG

Upstream 100 bases:

>100_bases
CACAGGCGCAGCAGGGCACAGTCTCAGTACCCTGGTTGATTGAGTCAATGCAGAGGTGGGATCCCTCTGTTGGGATAGCC
GTTAGGGAGGCAGGTTCACG

Downstream 100 bases:

>100_bases
GTCCTCTCTCCGGCGGTTTCCCAACTCAGCTATCCCCTTTCACTCCTCACTGCGCTGGACTATGTTTGTTGACTTTTTCA
TTCGCCGCCCTGTTTTTGCC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MQLRTALPLLCLSLLVAACRPGGPPRSMGGEGGGEGQPTPVAVGRVEEQQIEETSEFMASLGSQQVASIRPQVSGQVTQV
FVQLGSQVAAGAPLFEIDSRQQQAAVAGQTAGIAAAQANLESGRAVLSQLRADRLRLEAAAEFAREQHERNLRLLAEGAI
SQAQADQSSRDLRQAEAALAAQQEQIRAQEAAILRAEREVQRAQAEAERQQVQLQFFQVTAPFAGIVGDVLVRQGDYVTP
QTVLTTLTQTQALELNLNIPLQRAPQLRIGTPVQILDSRGEVIGSSQISFIAPEANAATQSVLAKALLENPAGQLRSAQF
VRTRVIWEERPALLVPVTAVARLGAQTFVYTVQTTEPPAEGMPPGAVAVQRPVQLGSIYGNSYEVLEGLEANEPIVLSGL
QKIRDGAPIVDEVLFQQRMQPQGGGRPPGSPP

Sequences:

>Translated_432_residues
MQLRTALPLLCLSLLVAACRPGGPPRSMGGEGGGEGQPTPVAVGRVEEQQIEETSEFMASLGSQQVASIRPQVSGQVTQV
FVQLGSQVAAGAPLFEIDSRQQQAAVAGQTAGIAAAQANLESGRAVLSQLRADRLRLEAAAEFAREQHERNLRLLAEGAI
SQAQADQSSRDLRQAEAALAAQQEQIRAQEAAILRAEREVQRAQAEAERQQVQLQFFQVTAPFAGIVGDVLVRQGDYVTP
QTVLTTLTQTQALELNLNIPLQRAPQLRIGTPVQILDSRGEVIGSSQISFIAPEANAATQSVLAKALLENPAGQLRSAQF
VRTRVIWEERPALLVPVTAVARLGAQTFVYTVQTTEPPAEGMPPGAVAVQRPVQLGSIYGNSYEVLEGLEANEPIVLSGL
QKIRDGAPIVDEVLFQQRMQPQGGGRPPGSPP
>Mature_432_residues
MQLRTALPLLCLSLLVAACRPGGPPRSMGGEGGGEGQPTPVAVGRVEEQQIEETSEFMASLGSQQVASIRPQVSGQVTQV
FVQLGSQVAAGAPLFEIDSRQQQAAVAGQTAGIAAAQANLESGRAVLSQLRADRLRLEAAAEFAREQHERNLRLLAEGAI
SQAQADQSSRDLRQAEAALAAQQEQIRAQEAAILRAEREVQRAQAEAERQQVQLQFFQVTAPFAGIVGDVLVRQGDYVTP
QTVLTTLTQTQALELNLNIPLQRAPQLRIGTPVQILDSRGEVIGSSQISFIAPEANAATQSVLAKALLENPAGQLRSAQF
VRTRVIWEERPALLVPVTAVARLGAQTFVYTVQTTEPPAEGMPPGAVAVQRPVQLGSIYGNSYEVLEGLEANEPIVLSGL
QKIRDGAPIVDEVLFQQRMQPQGGGRPPGSPP

Specific function: Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789665, Length=418, Percent_Identity=25.5980861244019, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789929, Length=361, Percent_Identity=25.4847645429363, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786668, Length=412, Percent_Identity=25.2427184466019, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87082036, Length=394, Percent_Identity=23.8578680203046, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 46060; Mature: 46060

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRTALPLLCLSLLVAACRPGGPPRSMGGEGGGEGQPTPVAVGRVEEQQIEETSEFMAS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH
LGSQQVASIRPQVSGQVTQVFVQLGSQVAAGAPLFEIDSRQQQAAVAGQTAGIAAAQANL
HCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCHHHHHHHH
ESGRAVLSQLRADRLRLEAAAEFAREQHERNLRLLAEGAISQAQADQSSRDLRQAEAALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQQEQIRAQEAAILRAEREVQRAQAEAERQQVQLQFFQVTAPFAGIVGDVLVRQGDYVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCH
QTVLTTLTQTQALELNLNIPLQRAPQLRIGTPVQILDSRGEVIGSSQISFIAPEANAATQ
HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEECCCCEEEECCCCCHHHH
SVLAKALLENPAGQLRSAQFVRTRVIWEERPALLVPVTAVARLGAQTFVYTVQTTEPPAE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCEEEEEEECCCCCCC
GMPPGAVAVQRPVQLGSIYGNSYEVLEGLEANEPIVLSGLQKIRDGAPIVDEVLFQQRMQ
CCCCCCHHHHCCHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCC
PQGGGRPPGSPP
CCCCCCCCCCCC
>Mature Secondary Structure
MQLRTALPLLCLSLLVAACRPGGPPRSMGGEGGGEGQPTPVAVGRVEEQQIEETSEFMAS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH
LGSQQVASIRPQVSGQVTQVFVQLGSQVAAGAPLFEIDSRQQQAAVAGQTAGIAAAQANL
HCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCHHHHHHHH
ESGRAVLSQLRADRLRLEAAAEFAREQHERNLRLLAEGAISQAQADQSSRDLRQAEAALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQQEQIRAQEAAILRAEREVQRAQAEAERQQVQLQFFQVTAPFAGIVGDVLVRQGDYVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCH
QTVLTTLTQTQALELNLNIPLQRAPQLRIGTPVQILDSRGEVIGSSQISFIAPEANAATQ
HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEECCCCEEEECCCCCHHHH
SVLAKALLENPAGQLRSAQFVRTRVIWEERPALLVPVTAVARLGAQTFVYTVQTTEPPAE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCEEEEEEECCCCCCC
GMPPGAVAVQRPVQLGSIYGNSYEVLEGLEANEPIVLSGLQKIRDGAPIVDEVLFQQRMQ
CCCCCCHHHHCCHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCC
PQGGGRPPGSPP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8196548 [H]