BacMap

Definition	Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession	NC_007776
Length	3,046,682

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The map label for this gene is hflB

Identifier: 86608120

GI number: 86608120

Start: 639992

End: 641908

Strand: Direct

Name: hflB

Synonym: CYB_0631

Alternate gene names: 86608120

Gene position: 639992-641908 (Clockwise)

Preceding gene: 86608119

Following gene: 86608125

Centisome position: 21.01

GC content: 60.46

Gene sequence:

>1917_bases
GTGAGTCAGAAAGGTAAAAACAAGAAATGGAGAAGCGCGGGGTTATATGCGCTGCTGGCCATCGTCTTGATCTCTTTAGC
CACCACCTTCTTGGGTAATCGCCCGCCTGAGCGTTTGGAGATCAGCTACTCCGACCTGATCAGCCGCGTCGAACGGGGCG
AGGTCAGCAAAGTTTTGGTGGAGACGGCCCCGGATGGTCGCCAGGTTGCCATCGCCGAGGCAGAAATCAACAACCGCGCC
ACCCAAGTGCAGGTGAATCTGCCCCCCCTTACCCCCGAGTTTGAGAACACCCTGGTTGCCAACGGGGTGGAGCTGGCCGT
GCGTCCTGTCCAAGAGGAGGGGCTACTCGGGCGCATTCTCAGCACCTTCTTCCTGCCAGTTTTGCTCTTGCTGGGGCTCT
TTTTCCTGCTGCGGCGGGCTCAAAATGGCCCAGGCAGCCAAGCTCTCAACTTCGGCAAATCCAGGGCACGGGTGCAAATG
GAGCCGAAAACCCAAATTACCTTCAACGATGTGGCCGGCATCGATCAGGCCAAGCTGGAGCTGGCAGAAGTGGTGGATTT
CCTGAAAAACTCAGAGCGCTTCACCGCTTTGGGAGCCAAGATTCCCCGCGGGGTGCTGCTGGTGGGCCCGCCCGGCACCG
GTAAGACCCTGTTGGCCCGCGCCGTAGCCGGAGAAGCAGGTGTGCCCTTTTTCTCCATTTCCGGCTCCGAGTTTGTGGAG
ATGTTTGTTGGGGTCGGCGCTTCTCGCGTGCGGGATCTGTTCGAGCAGGCCAAGCAAAATGCTCCCTGCATCGTCTTCAT
CGATGAAATTGATGCAGTCGGTCGCCAGCGGGGAGCTGGCTTGGGAGGTGGCAACGACGAACGGGAGCAGACCCTGAACC
AGTTGCTCACCGAGATGGACGGTTTTGAGGGCAACTCCGGTATCATCGTCATTGCGGCCACCAACCGACCGGATGTGCTG
GATGCGGCGCTGCTGCGGCCCGGTCGCTTCGACCGCCAAGTTACGGTGGATCGCCCCGATTTTCAGGGCCGGCTAGAAAT
CCTCAAGGTGCATGCCCGCGGCAAAACCCTGTCTGCCGATGTGGATCTGGAGAAATTGGCCCGCCGTACCCCTGGGTTTA
CCGGTGCCGATTTGGCCAACCTCCTGAACGAAGCAGCCATTCTGGCAGCCCGCCGCAACCTCACCGAGATCTCCATGGAC
GAGATCAACGACGCGGTGGATCGGGTGTTGGCCGGCCCAGAGAAGAAGGATCGGCTGATGAGCGAGCGGCGCAAGGAATT
GGTGGCCTACCACGAGGCGGGCCATGCCCTGGTGGGATCCCTCTTGCCCAACTACGATCCCATCCAAAAAGTGACGATCA
TCCCCCGGGGACAAGCAGGTGGCCTCACCTGGTTCATGCCCAGCGATGACGACATGGGACTAACCACCCGTGCCCATCTG
AAGAACATGATGACTGTTGCCTTGGGTGGGCGCGTGGCCGAAGAAGTGGTCTATGGAGAGTCGGAGATCACCACAGGGGC
AGCCAGTGACCTGCAGCAGGTGGCCCGCATCGCCCGCAACATGGTGACCCGCTTTGGCATGAGCGACCGACTGGGCAATG
TGGCCCTGGGCCGCCAATACGCCAACATTTTCCTGGGCCGGGAGATCGCCGCAGAACGGGATTTCTCGGAGGAAACAGCA
GCCCTCATCGACGAAGAGGTGCGGCGGCTGGTGAACGAGGCCTACCAACGGGCTACCTACTTGATTCGAGAAAACCGCGC
CCTCTTGGATCGGATCGCCCGTCGTTTGGTGGAGGCCGAAACCATCGATGGGGAAGAGCTGCAGGCCATCATCGACAACT
CTGAGGTGGTGATGTTGCCCCCCGAAGAGGAGCCAGAGCCGCTGACTCTGCCTATGGCCGTCAACGCTGGCGCCTAG

Upstream 100 bases:

>100_bases
CAGTCTGTTGCTGCAAGAACCCACCCGACCCCAGATTGTTACCCATAGGTCACCATCTGCGAGTTCGATTCAAAAACACC
CTTTGGGAGGAAACACTTCC

Downstream 100 bases:

>100_bases
TCTCTTGTCCCCAAGCTCAAACTTGGGATCCCTGCTTTTCCTCTTGAGGAGAGAGGGATCCCAATGTTTTGTATGATTTG
CGCTGGGAGAGGGGGAGTCC

Product: cell division protein FtsH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 637

Protein sequence:

>638_residues
MSQKGKNKKWRSAGLYALLAIVLISLATTFLGNRPPERLEISYSDLISRVERGEVSKVLVETAPDGRQVAIAEAEINNRA
TQVQVNLPPLTPEFENTLVANGVELAVRPVQEEGLLGRILSTFFLPVLLLLGLFFLLRRAQNGPGSQALNFGKSRARVQM
EPKTQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVE
MFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVL
DAALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSADVDLEKLARRTPGFTGADLANLLNEAAILAARRNLTEISMD
EINDAVDRVLAGPEKKDRLMSERRKELVAYHEAGHALVGSLLPNYDPIQKVTIIPRGQAGGLTWFMPSDDDMGLTTRAHL
KNMMTVALGGRVAEEVVYGESEITTGAASDLQQVARIARNMVTRFGMSDRLGNVALGRQYANIFLGREIAAERDFSEETA
ALIDEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAETIDGEELQAIIDNSEVVMLPPEEEPEPLTLPMAVNAGA

Sequences:

>Translated_638_residues
MSQKGKNKKWRSAGLYALLAIVLISLATTFLGNRPPERLEISYSDLISRVERGEVSKVLVETAPDGRQVAIAEAEINNRA
TQVQVNLPPLTPEFENTLVANGVELAVRPVQEEGLLGRILSTFFLPVLLLLGLFFLLRRAQNGPGSQALNFGKSRARVQM
EPKTQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVE
MFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVL
DAALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSADVDLEKLARRTPGFTGADLANLLNEAAILAARRNLTEISMD
EINDAVDRVLAGPEKKDRLMSERRKELVAYHEAGHALVGSLLPNYDPIQKVTIIPRGQAGGLTWFMPSDDDMGLTTRAHL
KNMMTVALGGRVAEEVVYGESEITTGAASDLQQVARIARNMVTRFGMSDRLGNVALGRQYANIFLGREIAAERDFSEETA
ALIDEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAETIDGEELQAIIDNSEVVMLPPEEEPEPLTLPMAVNAGA
>Mature_637_residues
SQKGKNKKWRSAGLYALLAIVLISLATTFLGNRPPERLEISYSDLISRVERGEVSKVLVETAPDGRQVAIAEAEINNRAT
QVQVNLPPLTPEFENTLVANGVELAVRPVQEEGLLGRILSTFFLPVLLLLGLFFLLRRAQNGPGSQALNFGKSRARVQME
PKTQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVEM
FVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLD
AALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSADVDLEKLARRTPGFTGADLANLLNEAAILAARRNLTEISMDE
INDAVDRVLAGPEKKDRLMSERRKELVAYHEAGHALVGSLLPNYDPIQKVTIIPRGQAGGLTWFMPSDDDMGLTTRAHLK
NMMTVALGGRVAEEVVYGESEITTGAASDLQQVARIARNMVTRFGMSDRLGNVALGRQYANIFLGREIAAERDFSEETAA
LIDEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAETIDGEELQAIIDNSEVVMLPPEEEPEPLTLPMAVNAGA

Specific function: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins

COG id: COG0465

COG function: function code O; ATP-dependent Zn proteases

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein; Stromal side

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the peptidase M41 family

Homologues:

Organism=Homo sapiens, GI300192933, Length=503, Percent_Identity=47.3161033797217, Blast_Score=456, Evalue=1e-128,
Organism=Homo sapiens, GI21327685, Length=500, Percent_Identity=45.8, Blast_Score=424, Evalue=1e-118,
Organism=Homo sapiens, GI7657689, Length=500, Percent_Identity=45.8, Blast_Score=423, Evalue=1e-118,
Organism=Homo sapiens, GI4507173, Length=471, Percent_Identity=45.6475583864119, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI24497435, Length=252, Percent_Identity=44.047619047619, Blast_Score=222, Evalue=9e-58,
Organism=Homo sapiens, GI4506209, Length=254, Percent_Identity=43.7007874015748, Blast_Score=216, Evalue=8e-56,
Organism=Homo sapiens, GI21361144, Length=245, Percent_Identity=42.8571428571429, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI6005942, Length=335, Percent_Identity=38.8059701492537, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI195539395, Length=245, Percent_Identity=41.6326530612245, Blast_Score=205, Evalue=1e-52,
Organism=Homo sapiens, GI45643123, Length=278, Percent_Identity=40.6474820143885, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI45643125, Length=278, Percent_Identity=40.6474820143885, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI24430151, Length=254, Percent_Identity=38.9763779527559, Blast_Score=194, Evalue=3e-49,
Organism=Homo sapiens, GI157671927, Length=230, Percent_Identity=42.1739130434783, Blast_Score=193, Evalue=5e-49,
Organism=Homo sapiens, GI89064750, Length=232, Percent_Identity=43.1034482758621, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI5729991, Length=232, Percent_Identity=43.1034482758621, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI24430155, Length=232, Percent_Identity=43.1034482758621, Blast_Score=192, Evalue=8e-49,
Organism=Homo sapiens, GI40806173, Length=137, Percent_Identity=62.7737226277372, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI229577436, Length=248, Percent_Identity=40.7258064516129, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI4505725, Length=233, Percent_Identity=40.7725321888412, Blast_Score=173, Evalue=5e-43,
Organism=Homo sapiens, GI24497618, Length=257, Percent_Identity=39.2996108949416, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI14149767, Length=255, Percent_Identity=38.0392156862745, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI62177112, Length=255, Percent_Identity=38.0392156862745, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI194018488, Length=260, Percent_Identity=38.8461538461538, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI153792536, Length=239, Percent_Identity=38.4937238493724, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI5901990, Length=254, Percent_Identity=36.2204724409449, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI156564401, Length=224, Percent_Identity=39.7321428571429, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI310125282, Length=224, Percent_Identity=38.8392857142857, Blast_Score=144, Evalue=4e-34,
Organism=Homo sapiens, GI310125280, Length=224, Percent_Identity=39.2857142857143, Blast_Score=143, Evalue=6e-34,
Organism=Homo sapiens, GI7019569, Length=246, Percent_Identity=37.8048780487805, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI226371754, Length=235, Percent_Identity=35.7446808510638, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI17865802, Length=238, Percent_Identity=38.2352941176471, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI11875211, Length=229, Percent_Identity=41.0480349344978, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI40806170, Length=229, Percent_Identity=41.0480349344978, Blast_Score=137, Evalue=4e-32,
Organism=Homo sapiens, GI31742536, Length=226, Percent_Identity=33.6283185840708, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI112789543, Length=226, Percent_Identity=33.6283185840708, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI31377644, Length=240, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI64084766, Length=225, Percent_Identity=32.8888888888889, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI116292174, Length=249, Percent_Identity=30.1204819277108, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI75677353, Length=226, Percent_Identity=31.4159292035398, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI1789568, Length=614, Percent_Identity=50.4885993485342, Blast_Score=604, Evalue=1e-174,
Organism=Caenorhabditis elegans, GI71994521, Length=459, Percent_Identity=50.3267973856209, Blast_Score=428, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI17554264, Length=444, Percent_Identity=47.5225225225225, Blast_Score=400, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI115534323, Length=463, Percent_Identity=45.7883369330454, Blast_Score=371, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI17554786, Length=252, Percent_Identity=44.047619047619, Blast_Score=223, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI25144278, Length=252, Percent_Identity=44.047619047619, Blast_Score=222, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI25144281, Length=252, Percent_Identity=44.047619047619, Blast_Score=221, Evalue=7e-58,
Organism=Caenorhabditis elegans, GI17508701, Length=245, Percent_Identity=44.4897959183673, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17563248, Length=259, Percent_Identity=43.2432432432432, Blast_Score=211, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17531535, Length=248, Percent_Identity=45.5645161290323, Blast_Score=208, Evalue=8e-54,
Organism=Caenorhabditis elegans, GI17532375, Length=229, Percent_Identity=42.7947598253275, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71987372, Length=236, Percent_Identity=43.6440677966102, Blast_Score=204, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI71987364, Length=236, Percent_Identity=43.6440677966102, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17563250, Length=254, Percent_Identity=40.1574803149606, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17537217, Length=282, Percent_Identity=37.9432624113475, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17505546, Length=255, Percent_Identity=40.3921568627451, Blast_Score=189, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17508053, Length=231, Percent_Identity=43.7229437229437, Blast_Score=186, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17554784, Length=233, Percent_Identity=44.6351931330472, Blast_Score=184, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI25153574, Length=228, Percent_Identity=40.3508771929825, Blast_Score=168, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI193209502, Length=225, Percent_Identity=40.4444444444444, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17570397, Length=165, Percent_Identity=48.4848484848485, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI32566590, Length=165, Percent_Identity=48.4848484848485, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI133931034, Length=248, Percent_Identity=37.0967741935484, Blast_Score=150, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI193206116, Length=248, Percent_Identity=37.0967741935484, Blast_Score=150, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI193206114, Length=248, Percent_Identity=37.0967741935484, Blast_Score=150, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI133901658, Length=213, Percent_Identity=42.2535211267606, Blast_Score=147, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI133901662, Length=210, Percent_Identity=42.8571428571429, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17562804, Length=232, Percent_Identity=35.7758620689655, Blast_Score=142, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI86561515, Length=261, Percent_Identity=34.0996168582375, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI25146157, Length=244, Percent_Identity=38.1147540983607, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI32563584, Length=242, Percent_Identity=35.9504132231405, Blast_Score=123, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17508421, Length=246, Percent_Identity=35.7723577235772, Blast_Score=123, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17560432, Length=232, Percent_Identity=35.3448275862069, Blast_Score=119, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17541224, Length=203, Percent_Identity=36.9458128078818, Blast_Score=112, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17541226, Length=203, Percent_Identity=36.9458128078818, Blast_Score=112, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI71990294, Length=198, Percent_Identity=28.2828282828283, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320854, Length=541, Percent_Identity=47.3197781885397, Blast_Score=461, Evalue=1e-130,
Organism=Saccharomyces cerevisiae, GI6323736, Length=504, Percent_Identity=47.8174603174603, Blast_Score=461, Evalue=1e-130,
Organism=Saccharomyces cerevisiae, GI6325281, Length=449, Percent_Identity=45.8797327394209, Blast_Score=410, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6321390, Length=245, Percent_Identity=42.4489795918367, Blast_Score=213, Evalue=5e-56,
Organism=Saccharomyces cerevisiae, GI6320077, Length=245, Percent_Identity=46.1224489795918, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6322704, Length=259, Percent_Identity=42.8571428571429, Blast_Score=212, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6324833, Length=246, Percent_Identity=43.9024390243902, Blast_Score=206, Evalue=7e-54,
Organism=Saccharomyces cerevisiae, GI6324691, Length=259, Percent_Identity=38.996138996139, Blast_Score=199, Evalue=9e-52,
Organism=Saccharomyces cerevisiae, GI6320197, Length=254, Percent_Identity=38.5826771653543, Blast_Score=194, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6320602, Length=247, Percent_Identity=40.8906882591093, Blast_Score=187, Evalue=5e-48,
Organism=Saccharomyces cerevisiae, GI6323429, Length=232, Percent_Identity=41.8103448275862, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6322994, Length=250, Percent_Identity=39.6, Blast_Score=184, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6324000, Length=233, Percent_Identity=43.3476394849785, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6322651, Length=263, Percent_Identity=38.0228136882129, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6321709, Length=262, Percent_Identity=38.5496183206107, Blast_Score=164, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6319554, Length=216, Percent_Identity=37.037037037037, Blast_Score=136, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6321465, Length=256, Percent_Identity=36.328125, Blast_Score=134, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6325183, Length=238, Percent_Identity=36.1344537815126, Blast_Score=133, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6325431, Length=236, Percent_Identity=35.1694915254237, Blast_Score=133, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6320887, Length=251, Percent_Identity=33.8645418326693, Blast_Score=126, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6320583, Length=194, Percent_Identity=31.4432989690722, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI28574878, Length=501, Percent_Identity=45.9081836327345, Blast_Score=440, Evalue=1e-123,
Organism=Drosophila melanogaster, GI24665814, Length=501, Percent_Identity=45.9081836327345, Blast_Score=439, Evalue=1e-123,
Organism=Drosophila melanogaster, GI24658770, Length=491, Percent_Identity=46.0285132382892, Blast_Score=421, Evalue=1e-117,
Organism=Drosophila melanogaster, GI24639391, Length=453, Percent_Identity=46.3576158940397, Blast_Score=402, Evalue=1e-112,
Organism=Drosophila melanogaster, GI19920408, Length=252, Percent_Identity=43.6507936507937, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24651451, Length=259, Percent_Identity=44.015444015444, Blast_Score=218, Evalue=1e-56,
Organism=Drosophila melanogaster, GI17738151, Length=245, Percent_Identity=43.265306122449, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI17137738, Length=254, Percent_Identity=43.3070866141732, Blast_Score=210, Evalue=3e-54,
Organism=Drosophila melanogaster, GI45554047, Length=165, Percent_Identity=58.1818181818182, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI161076486, Length=336, Percent_Identity=36.6071428571429, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI17137560, Length=243, Percent_Identity=43.6213991769547, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI161076488, Length=243, Percent_Identity=43.6213991769547, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24660075, Length=233, Percent_Identity=45.0643776824034, Blast_Score=201, Evalue=9e-52,
Organism=Drosophila melanogaster, GI281365776, Length=233, Percent_Identity=45.0643776824034, Blast_Score=201, Evalue=9e-52,
Organism=Drosophila melanogaster, GI45552965, Length=233, Percent_Identity=45.0643776824034, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24640100, Length=245, Percent_Identity=41.2244897959184, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI19921202, Length=232, Percent_Identity=42.6724137931034, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI18860063, Length=241, Percent_Identity=41.9087136929461, Blast_Score=195, Evalue=8e-50,
Organism=Drosophila melanogaster, GI24649446, Length=254, Percent_Identity=39.3700787401575, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI281361487, Length=232, Percent_Identity=42.6724137931034, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24663015, Length=255, Percent_Identity=38.0392156862745, Blast_Score=188, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24652279, Length=190, Percent_Identity=44.2105263157895, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24656825, Length=248, Percent_Identity=40.7258064516129, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24656820, Length=248, Percent_Identity=40.7258064516129, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI281363136, Length=379, Percent_Identity=34.0369393139842, Blast_Score=160, Evalue=3e-39,
Organism=Drosophila melanogaster, GI78707192, Length=379, Percent_Identity=34.0369393139842, Blast_Score=160, Evalue=3e-39,
Organism=Drosophila melanogaster, GI21355121, Length=199, Percent_Identity=39.6984924623116, Blast_Score=154, Evalue=2e-37,
Organism=Drosophila melanogaster, GI18859657, Length=235, Percent_Identity=38.7234042553192, Blast_Score=150, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24644145, Length=257, Percent_Identity=35.0194552529183, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI281360144, Length=252, Percent_Identity=36.1111111111111, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360140, Length=252, Percent_Identity=36.1111111111111, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360136, Length=252, Percent_Identity=36.1111111111111, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24644411, Length=252, Percent_Identity=36.1111111111111, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360142, Length=252, Percent_Identity=36.1111111111111, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI21357333, Length=252, Percent_Identity=36.1111111111111, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281360146, Length=252, Percent_Identity=36.1111111111111, Blast_Score=140, Evalue=3e-33,
Organism=Drosophila melanogaster, GI281360138, Length=252, Percent_Identity=36.1111111111111, Blast_Score=140, Evalue=3e-33,
Organism=Drosophila melanogaster, GI20129423, Length=254, Percent_Identity=35.8267716535433, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI20129529, Length=293, Percent_Identity=33.4470989761092, Blast_Score=137, Evalue=3e-32,
Organism=Drosophila melanogaster, GI17864540, Length=287, Percent_Identity=33.7979094076655, Blast_Score=136, Evalue=5e-32,
Organism=Drosophila melanogaster, GI28573010, Length=277, Percent_Identity=33.9350180505415, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24581396, Length=245, Percent_Identity=37.9591836734694, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI28571849, Length=229, Percent_Identity=40.174672489083, Blast_Score=134, Evalue=3e-31,
Organism=Drosophila melanogaster, GI28571847, Length=229, Percent_Identity=40.174672489083, Blast_Score=134, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24639486, Length=251, Percent_Identity=31.8725099601594, Blast_Score=100, Evalue=5e-21,
Organism=Drosophila melanogaster, GI20129417, Length=157, Percent_Identity=35.031847133758, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24583262, Length=157, Percent_Identity=35.031847133758, Blast_Score=71, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FTSH_SYNJB (Q2JNP0)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_476882.1
- ProteinModelPortal:   Q2JNP0
- STRING:   Q2JNP0
- MEROPS:   M41.005
- GeneID:   3902451
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_0631
- TIGR:   CYB_0631
- eggNOG:   COG0465
- HOGENOM:   HBG724153
- OMA:   QTQVTFN
- PhylomeDB:   Q2JNP0
- ProtClustDB:   CLSK892632
- BioCyc:   SSP321332:CYB_0631-MONOMER
- GO:   GO:0006508
- HAMAP:   MF_01458
- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR005936
- InterPro:   IPR011546
- InterPro:   IPR000642
- SMART:   SM00382
- TIGRFAMs:   TIGR01241

Pfam domain/function: PF00004 AAA; PF06480 FtsH_ext; PF01434 Peptidase_M41

EC number: 3.4.24.-

Molecular weight: Translated: 69690; Mature: 69559

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00674 AAA

Important sites: ACT_SITE 432-432

Signals:

None

Transmembrane regions:

HASH(0x12361d44)-; HASH(0x112c4cdc)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKGKNKKWRSAGLYALLAIVLISLATTFLGNRPPERLEISYSDLISRVERGEVSKVLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHHHHHHCCHHHHHE
ETAPDGRQVAIAEAEINNRATQVQVNLPPLTPEFENTLVANGVELAVRPVQEEGLLGRIL
ECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHCCCCEEEEECCHHCCHHHHHH
STFFLPVLLLLGLFFLLRRAQNGPGSQALNFGKSRARVQMEPKTQITFNDVAGIDQAKLE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCEEEEHHHCCCCHHHHH
LAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVE
HHHHHHHHHCCCCEEHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEECCHHHHHH
MFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMD
HHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
GFEGNSGIIVIAATNRPDVLDAALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSAD
CCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECCCCEEECC
VDLEKLARRTPGFTGADLANLLNEAAILAARRNLTEISMDEINDAVDRVLAGPEKKDRLM
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
SERRKELVAYHEAGHALVGSLLPNYDPIQKVTIIPRGQAGGLTWFMPSDDDMGLTTRAHL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHH
KNMMTVALGGRVAEEVVYGESEITTGAASDLQQVARIARNMVTRFGMSDRLGNVALGRQY
HHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ANIFLGREIAAERDFSEETAALIDEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TIDGEELQAIIDNSEVVMLPPEEEPEPLTLPMAVNAGA
CCCHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCH
>Mature Secondary Structure 
SQKGKNKKWRSAGLYALLAIVLISLATTFLGNRPPERLEISYSDLISRVERGEVSKVLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHHHHHHCCHHHHHE
ETAPDGRQVAIAEAEINNRATQVQVNLPPLTPEFENTLVANGVELAVRPVQEEGLLGRIL
ECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHCCCCEEEEECCHHCCHHHHHH
STFFLPVLLLLGLFFLLRRAQNGPGSQALNFGKSRARVQMEPKTQITFNDVAGIDQAKLE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCEEEEHHHCCCCHHHHH
LAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVE
HHHHHHHHHCCCCEEHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEECCHHHHHH
MFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMD
HHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
GFEGNSGIIVIAATNRPDVLDAALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSAD
CCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECCCCEEECC
VDLEKLARRTPGFTGADLANLLNEAAILAARRNLTEISMDEINDAVDRVLAGPEKKDRLM
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
SERRKELVAYHEAGHALVGSLLPNYDPIQKVTIIPRGQAGGLTWFMPSDDDMGLTTRAHL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHH
KNMMTVALGGRVAEEVVYGESEITTGAASDLQQVARIARNMVTRFGMSDRLGNVALGRQY
HHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ANIFLGREIAAERDFSEETAALIDEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TIDGEELQAIIDNSEVVMLPPEEEPEPLTLPMAVNAGA
CCCHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA