| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is cobK [H]
Identifier: 86607620
GI number: 86607620
Start: 131641
End: 132396
Strand: Reverse
Name: cobK [H]
Synonym: CYB_0118
Alternate gene names: 86607620
Gene position: 132396-131641 (Counterclockwise)
Preceding gene: 86607624
Following gene: 86607617
Centisome position: 4.35
GC content: 62.7
Gene sequence:
>756_bases GTGGCTTTGATCGGGGGCACTAGCGAGAGCCGCAGCTTGGCCGACGCCCTCAGCCGCCAAGGGATCCCTTGGGTGGCAAC CGTCACCACCGAAGGGGCCAGAAGACTGTATCAGGATTTGCCCGGTCAGGTGGTGGTCACCCGATTTTCGCCGCCATCTC TGGAACAATTCCTGCAAGAGTGCCGGATCCGCGTAGTGGTGGATGCCTCTCATCCTTTTGCCCAGCAAATCTCGCAACTG GCCATCCAGGTGACGGCTCAACTGAGGATCCCCTACCTGCGCTACGAACGCCCTCCTCTGGAGCTGGATCCCTGGGTCCA GGTGGTGCCGGACTGGCAGGGGGTGCTCACAGAGGCGGTGCTGGCGGGGCGGCGGGTGCTGCTGACGGTGGGAGTGAAGG CCCTGCCCCTGTTTGTACCTTGGCAAGATCGCTGCCAACTGTGGGCACGGGTGCTGCCGGAATCGGTTCCCCAAGCGGTG CAAGCCGGGATCCCTGCCGAGCGGGTGATCGGGATGCGCTTGCCCCTCAGCTTTGAGCAAGAACTGCAGCTTTGGCAGCG GTTCAGCCCTCAGGTGGTGATCAGCAAAGCTTCTGGGGAAGCAGGTGGGCTGGGGATCAAACAGGCAGTGGCCAAAACCC TGGGGATCCCTCTGTGGGTGATCCGGCGACCCCCGTTGGACTATCCCTGGTGCAGCCAGGATTTGACAGAGGTGGTGCAG GAATGCAGGCGATGCTTGGGCAGAGCCAAACCTTGA
Upstream 100 bases:
>100_bases CTCGATCATGAGCAATTGCCTCCAGCCGGTGATCTTGATCGTATCTACGGGCGTCAAAGTTTGGCAACACACCATGAGCT CAGTTGGTAGTCCAGTTGAA
Downstream 100 bases:
>100_bases GGTTGCCCGGCTCCGGCCAGACAAGTCAAAACGGCTCTTCGGGGGGCAGGTTGGAGTCGCGGTCTTGACGGGATCCCAGC AGTTCTAGGCGATCTACAGC
Product: cobalt-precorrin-6x reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MALIGGTSESRSLADALSRQGIPWVATVTTEGARRLYQDLPGQVVVTRFSPPSLEQFLQECRIRVVVDASHPFAQQISQL AIQVTAQLRIPYLRYERPPLELDPWVQVVPDWQGVLTEAVLAGRRVLLTVGVKALPLFVPWQDRCQLWARVLPESVPQAV QAGIPAERVIGMRLPLSFEQELQLWQRFSPQVVISKASGEAGGLGIKQAVAKTLGIPLWVIRRPPLDYPWCSQDLTEVVQ ECRRCLGRAKP
Sequences:
>Translated_251_residues MALIGGTSESRSLADALSRQGIPWVATVTTEGARRLYQDLPGQVVVTRFSPPSLEQFLQECRIRVVVDASHPFAQQISQL AIQVTAQLRIPYLRYERPPLELDPWVQVVPDWQGVLTEAVLAGRRVLLTVGVKALPLFVPWQDRCQLWARVLPESVPQAV QAGIPAERVIGMRLPLSFEQELQLWQRFSPQVVISKASGEAGGLGIKQAVAKTLGIPLWVIRRPPLDYPWCSQDLTEVVQ ECRRCLGRAKP >Mature_250_residues ALIGGTSESRSLADALSRQGIPWVATVTTEGARRLYQDLPGQVVVTRFSPPSLEQFLQECRIRVVVDASHPFAQQISQLA IQVTAQLRIPYLRYERPPLELDPWVQVVPDWQGVLTEAVLAGRRVLLTVGVKALPLFVPWQDRCQLWARVLPESVPQAVQ AGIPAERVIGMRLPLSFEQELQLWQRFSPQVVISKASGEAGGLGIKQAVAKTLGIPLWVIRRPPLDYPWCSQDLTEVVQE CRRCLGRAKP
Specific function: Catalyzes the reduction of the macrocycle of cobalt- precorrin-6X into cobalt-precorrin-6Y [H]
COG id: COG2099
COG function: function code H; Precorrin-6x reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin-6x reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003723 [H]
Pfam domain/function: PF02571 CbiJ [H]
EC number: NA
Molecular weight: Translated: 28012; Mature: 27881
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS51014 COBK_CBIJ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIGGTSESRSLADALSRQGIPWVATVTTEGARRLYQDLPGQVVVTRFSPPSLEQFLQE CEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCCHHHHHHH CRIRVVVDASHPFAQQISQLAIQVTAQLRIPYLRYERPPLELDPWVQVVPDWQGVLTEAV CCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHEECCCHHHHHHHHH LAGRRVLLTVGVKALPLFVPWQDRCQLWARVLPESVPQAVQAGIPAERVIGMRLPLSFEQ HHCCCEEEEECHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCHHH ELQLWQRFSPQVVISKASGEAGGLGIKQAVAKTLGIPLWVIRRPPLDYPWCSQDLTEVVQ HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH ECRRCLGRAKP HHHHHHCCCCC >Mature Secondary Structure ALIGGTSESRSLADALSRQGIPWVATVTTEGARRLYQDLPGQVVVTRFSPPSLEQFLQE EEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCCHHHHHHH CRIRVVVDASHPFAQQISQLAIQVTAQLRIPYLRYERPPLELDPWVQVVPDWQGVLTEAV CCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHEECCCHHHHHHHHH LAGRRVLLTVGVKALPLFVPWQDRCQLWARVLPESVPQAVQAGIPAERVIGMRLPLSFEQ HHCCCEEEEECHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCHHH ELQLWQRFSPQVVISKASGEAGGLGIKQAVAKTLGIPLWVIRRPPLDYPWCSQDLTEVVQ HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH ECRRCLGRAKP HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]