| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is purA [H]
Identifier: 86607581
GI number: 86607581
Start: 91835
End: 93184
Strand: Reverse
Name: purA [H]
Synonym: CYB_0079
Alternate gene names: 86607581
Gene position: 93184-91835 (Counterclockwise)
Preceding gene: 86607582
Following gene: 86607579
Centisome position: 3.06
GC content: 59.41
Gene sequence:
>1350_bases TTGGCAAACGTCGTGGTTGTCGGTGCCCAGTGGGGCGATGAAGGAAAAGGGAAGATCACCGACCTCCTCAGTGAAAAGGC CCATGTGGTCGTCCGCTATCAAGGTGGGGTGAATGCAGGGCATACCCTGGTGGTGGGGGGCCAAACCTTCAAGCTACACT TGATCCCCTCTGGCATTCTCTACCCCGACAAACGCTGCATCATCGCCAGCGGCACGGTGATCGATCCCGAGGTTCTGCTG GCCGAGATCGACCAACTGCATCAATTGGGCATTTCCACCGACAACCTGTTCATTGCCGAAACGGCCCACGTTACCCTGCC CTACCACCGGGTCATTGACATCGCAGAAGAGGAGCGGCGTGGCATTTACCGGCTGGGCACCACCGGTCGGGGCATTGGCC CCACCTATGCCGACAAGGCCGAGCGCATGGGCATTCGCGTCGTGGACTTGATGTACCCTGACCAGCTGCGGGAGCGCCTC AGTTGGGCCATTCCCTACAAAAATGTCTTGCTGGAAAAGATCTATAACTTGCCGCCCTTGGATCCCGAGCCAATTATCGA GCAATACCTGGCCTATGCCGAGCGGCTGCGCCCCTATGTTACCGACGCTGCTCTGCTTCTCACCCAAGCCATCGAAGATC GGGAGAACATCCTGTTTGAAGGGGCTCAAGGCACCCTGTTGGATCTCGACTACGGCACCTACCCCTACGTCACCTCCTCC CATCCCATTGCCGGTGGCGCTTGTATTGGCGCTGGGATCGGCCCCACCAGCATTGACCGGGTGATCGGGGTGGCCAAAGC CTACACCACCCGCGTTGGCGAAGGCCCTTTCCCCACCGAGCTCAAAGATGAGATCGGGGCGTACCTGGGGGCAACCGGTG CTGAATTTGGCACCACCACAGGGCGACAACGGCGCTGCGGCTGGTTTGACGGGGTAATTGGGCGCTACGCGGTGCGAATC AATGGCCTAGACTGCCTGGCCATCACCAAACTGGATGTGCTGGATGGCTTGGATGAGATCAAGGTGTGCGTGGCCTACGA GTACCAGGGGCGGGAAATTCGTCACTTTCCCAGCGATGCCCGGGTTTTCGCCCAGTGCAAACCCATCTACGAAACCCTGC CGGGCTGGAAATGTTCCACCAAAGATTGCCGCTCCATCCAAGACTTGCCCCCCGAAGCCCATGATTACCTGAAGTTTTTG GCACAGTTGATGCAGGTGCCGATTGCCATTGTTTCTCTGGGGGCCAGCCGCGACCAGACGATCATTGTCGAAGATCCCAT CCACGGCCCCAAGCGGGCCCTTCTCTACCCCAATGGTGGCAAGCGCGCCCACGCCCTCATGCCCGACTGA
Upstream 100 bases:
>100_bases TCCTGATCTCTCAACATCGCCCGGAGCGATGCGGTAGATTAGTGCAGCAACCCCCGCAAAGGGGATTTTTTGTGCCATCT ACGGACTGTAGGAGAAGCTC
Downstream 100 bases:
>100_bases GTGGGCTCAAGAACAATTGGGAACAAGGGCAATCATAGGGCAATCATTAACAATGTAGTGATCAAATGCTCAGTAATGAT CAATGTGAGTTAAGTTATGG
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MANVVVVGAQWGDEGKGKITDLLSEKAHVVVRYQGGVNAGHTLVVGGQTFKLHLIPSGILYPDKRCIIASGTVIDPEVLL AEIDQLHQLGISTDNLFIAETAHVTLPYHRVIDIAEEERRGIYRLGTTGRGIGPTYADKAERMGIRVVDLMYPDQLRERL SWAIPYKNVLLEKIYNLPPLDPEPIIEQYLAYAERLRPYVTDAALLLTQAIEDRENILFEGAQGTLLDLDYGTYPYVTSS HPIAGGACIGAGIGPTSIDRVIGVAKAYTTRVGEGPFPTELKDEIGAYLGATGAEFGTTTGRQRRCGWFDGVIGRYAVRI NGLDCLAITKLDVLDGLDEIKVCVAYEYQGREIRHFPSDARVFAQCKPIYETLPGWKCSTKDCRSIQDLPPEAHDYLKFL AQLMQVPIAIVSLGASRDQTIIVEDPIHGPKRALLYPNGGKRAHALMPD
Sequences:
>Translated_449_residues MANVVVVGAQWGDEGKGKITDLLSEKAHVVVRYQGGVNAGHTLVVGGQTFKLHLIPSGILYPDKRCIIASGTVIDPEVLL AEIDQLHQLGISTDNLFIAETAHVTLPYHRVIDIAEEERRGIYRLGTTGRGIGPTYADKAERMGIRVVDLMYPDQLRERL SWAIPYKNVLLEKIYNLPPLDPEPIIEQYLAYAERLRPYVTDAALLLTQAIEDRENILFEGAQGTLLDLDYGTYPYVTSS HPIAGGACIGAGIGPTSIDRVIGVAKAYTTRVGEGPFPTELKDEIGAYLGATGAEFGTTTGRQRRCGWFDGVIGRYAVRI NGLDCLAITKLDVLDGLDEIKVCVAYEYQGREIRHFPSDARVFAQCKPIYETLPGWKCSTKDCRSIQDLPPEAHDYLKFL AQLMQVPIAIVSLGASRDQTIIVEDPIHGPKRALLYPNGGKRAHALMPD >Mature_448_residues ANVVVVGAQWGDEGKGKITDLLSEKAHVVVRYQGGVNAGHTLVVGGQTFKLHLIPSGILYPDKRCIIASGTVIDPEVLLA EIDQLHQLGISTDNLFIAETAHVTLPYHRVIDIAEEERRGIYRLGTTGRGIGPTYADKAERMGIRVVDLMYPDQLRERLS WAIPYKNVLLEKIYNLPPLDPEPIIEQYLAYAERLRPYVTDAALLLTQAIEDRENILFEGAQGTLLDLDYGTYPYVTSSH PIAGGACIGAGIGPTSIDRVIGVAKAYTTRVGEGPFPTELKDEIGAYLGATGAEFGTTTGRQRRCGWFDGVIGRYAVRIN GLDCLAITKLDVLDGLDEIKVCVAYEYQGREIRHFPSDARVFAQCKPIYETLPGWKCSTKDCRSIQDLPPEAHDYLKFLA QLMQVPIAIVSLGASRDQTIIVEDPIHGPKRALLYPNGGKRAHALMPD
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=427, Percent_Identity=43.7939110070258, Blast_Score=350, Evalue=2e-96, Organism=Homo sapiens, GI34577063, Length=427, Percent_Identity=43.559718969555, Blast_Score=343, Evalue=1e-94, Organism=Homo sapiens, GI40316944, Length=397, Percent_Identity=42.3173803526448, Blast_Score=309, Evalue=4e-84, Organism=Escherichia coli, GI1790620, Length=427, Percent_Identity=49.6487119437939, Blast_Score=407, Evalue=1e-114, Organism=Caenorhabditis elegans, GI25146553, Length=431, Percent_Identity=40.1392111368909, Blast_Score=307, Evalue=7e-84, Organism=Caenorhabditis elegans, GI25146555, Length=431, Percent_Identity=40.1392111368909, Blast_Score=306, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6324109, Length=430, Percent_Identity=43.0232558139535, Blast_Score=342, Evalue=7e-95, Organism=Drosophila melanogaster, GI21356033, Length=424, Percent_Identity=42.2169811320755, Blast_Score=341, Evalue=7e-94,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 49352; Mature: 49221
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVVVVGAQWGDEGKGKITDLLSEKAHVVVRYQGGVNAGHTLVVGGQTFKLHLIPSGIL CCCEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEECCCEEEEEEECCCCC YPDKRCIIASGTVIDPEVLLAEIDQLHQLGISTDNLFIAETAHVTLPYHRVIDIAEEERR CCCCEEEEECCCEECHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECHHHHHHHHHHHCC GIYRLGTTGRGIGPTYADKAERMGIRVVDLMYPDQLRERLSWAIPYKNVLLEKIYNLPPL CEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCC DPEPIIEQYLAYAERLRPYVTDAALLLTQAIEDRENILFEGAQGTLLDLDYGTYPYVTSS CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCEECC HPIAGGACIGAGIGPTSIDRVIGVAKAYTTRVGEGPFPTELKDEIGAYLGATGAEFGTTT CCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC GRQRRCGWFDGVIGRYAVRINGLDCLAITKLDVLDGLDEIKVCVAYEYQGREIRHFPSDA CCCCCCCHHHHHHEEEEEEECCCEEEEEEHHHHHCCCCCEEEEEEEEECCCEEECCCCCH RVFAQCKPIYETLPGWKCSTKDCRSIQDLPPEAHDYLKFLAQLMQVPIAIVSLGASRDQT HHHHHCCHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCE IIVEDPIHGPKRALLYPNGGKRAHALMPD EEEECCCCCCCEEEEECCCCCEECCCCCC >Mature Secondary Structure ANVVVVGAQWGDEGKGKITDLLSEKAHVVVRYQGGVNAGHTLVVGGQTFKLHLIPSGIL CCEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEECCCEEEEEEECCCCC YPDKRCIIASGTVIDPEVLLAEIDQLHQLGISTDNLFIAETAHVTLPYHRVIDIAEEERR CCCCEEEEECCCEECHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECHHHHHHHHHHHCC GIYRLGTTGRGIGPTYADKAERMGIRVVDLMYPDQLRERLSWAIPYKNVLLEKIYNLPPL CEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCC DPEPIIEQYLAYAERLRPYVTDAALLLTQAIEDRENILFEGAQGTLLDLDYGTYPYVTSS CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCEECC HPIAGGACIGAGIGPTSIDRVIGVAKAYTTRVGEGPFPTELKDEIGAYLGATGAEFGTTT CCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC GRQRRCGWFDGVIGRYAVRINGLDCLAITKLDVLDGLDEIKVCVAYEYQGREIRHFPSDA CCCCCCCHHHHHHEEEEEEECCCEEEEEEHHHHHCCCCCEEEEEEEEECCCEEECCCCCH RVFAQCKPIYETLPGWKCSTKDCRSIQDLPPEAHDYLKFLAQLMQVPIAIVSLGASRDQT HHHHHCCHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCE IIVEDPIHGPKRALLYPNGGKRAHALMPD EEEECCCCCCCEEEEECCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA