| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ftsH2 [H]
Identifier: 86607507
GI number: 86607507
Start: 3372
End: 5294
Strand: Reverse
Name: ftsH2 [H]
Synonym: CYB_0004
Alternate gene names: 86607507
Gene position: 5294-3372 (Counterclockwise)
Preceding gene: 86607508
Following gene: 86607506
Centisome position: 0.17
GC content: 61.67
Gene sequence:
>1923_bases ATGAACAAGCCTCTATCTCCCCAGCGCTGGCTGATCGCCCTCCTGCTGGGCTTTTGTCTCTGGCAGGGATCCGGCCTGGT GCTGCAGCCTGCACCCGCCCATGCAGCTTTGGCCTCGGCCCTCACCTACGATCGCTTTTTGCGCTACGTCGAGGAGGGGC GGGTTACGGATGTGCGCCTCACGGACAACAATCTGGTAGCTGAAGTTACGGCTGTGGATCCCCAGACCCAGCATTCCACC CGCTACCGAGTGAACCTGCTGCCCAACACCGTACCGCAACTGGTGGACCGCCTCACCGAGCAGGGGATCGAAGTGGCAGT GGTACCCACCCGCAATGGCAGCGCCTTTTGGGCGCTTCTGGGCAACCTGGTGATCCCGCTGTTGTTGTTGGGGGGGTTGT TCTTTTTCCTGCGGCGTGCCGGTGGCGGAGCGGGCGGCCCTGGGCAGGCGATGAACTTCGGCAAATCGCGGGCCCGCTTC CAGATGGAAGCCAAAACCGGCGTTAAGTTCGACGATGTGGCCGGCATCGAAGAAGCCAAAGAAGAATTGCAAGAGGTGGT TACCTTCTTGAAGAAGCCGGAGCGCTTCACCGCTGTTGGGGCCAAGATCCCCAAAGGCGTGTTGTTGGTGGGGCCGCCGG GGACGGGCAAAACCCTTCTGGCCAAGGCCATTGCCGGCGAGGCAGGAGTGCCTTTCTTTAGCCTGTCCGGCTCTGAGTTT GTGGAAATGTTTGTCGGGGTGGGTGCCTCTCGCGTACGGGATCTCTTCAAGAAGGCCAAGGAGAATGCGCCCTGCATCGT CTTCATCGACGAGATTGACGCGGTGGGCCGGCAGCGGGGGGCCGGCATTGGCGGTGGCAACGACGAACGCGAGCAAACCC TGAACCAGTTGCTCACGGAGATGGACGGCTTTGAGGGCAACACCGGCATTATCGTGATTGCCGCCACCAACCGCCCTGAT GTGTTGGATGCGGCTCTCTTGCGTCCGGGCCGCTTCGACCGCCAGATTACGGTGGATCGGCCTAGCTTTAAGGGGCGCTA CGAGATCTTGCGGGTGCATGCCCGCAACAAGAAGCTGGCGGAAGAGGTCAGCCTAGAGGCGATTGCCCGCCGTACCCCTG GCTTTGCCGGTGCGGATCTGGCCAACCTGCTCAATGAAGCGGCCATTTTGGCGGCCCGCCGTCAGCGCATGGCCATCACC AACCAAGACATTGAGGACGCCATTGACCGCATCACCATCGGCCTGACCAAGCCGCCGCTTCTGGACGGCAAGAGCAAGCG CCTGATCGCCTACCACGAGTGTGGCCATGCCCTGTTGATGACACTTTTGCCCCACGCGGATCCCTTGAACAAGGTGACCA TCATCCCCCGTTCCGGCGGCGCAGGTGGCTTTGCCCAGCAACTGCCCAACGAGGAGCAGATCGACTCCGGCATGTACAGC CGCGCTTGGCTGCTGGATCGGGTGGTGGTGGGCTTTGGCGGTCGGGCGGCCGAAGAGATCGTCTTCGGCTACTCGGAAGT GACCACCGGAGCCAGCAACGACCTGCAGCAGAACACGAATCTGGTGCGGCAGATGGTGACCCGCTTTGGCATGTCTGAGC TGGGGCCCTTGATGCTGGATCCCCCCAACAACGAGGTATTCTTGGGCGGCGGCTGGATGAACCGCGTCGAGTACTCGGAG GATGTGGCCGCCAAGATCGACCGCCAGGTGCGGCAGATCCTGGAGAGCTGTTACCAGAAAGCCAAGCAGATTTTGCTGGA GCACCGCCCTCTGCTGGATCGATTGGCCGATACCTTGGTGGAACGGGAAACCCTGGATGGCGACGAATTCCGGGCGATTG TCTCAGAGTATGTGCCCATCCCGGAGAAGGTCGGCCTACCCAGTCCATTCCCGGAAGCGGGACGGAGTCCAAAGCTGGTC TAA
Upstream 100 bases:
>100_bases TCCCTCAGGAGCTCATCCTTGCGGGGGTAGGGTTGTGCCTTCCAGGAGGGACAGGTTAAGTTTGTTAAAGGACTTTTAAT AACCGAGCGTTCTCTTCCCT
Downstream 100 bases:
>100_bases GGGATCCCATCTCCATTGCCAGATAGACAACTGGGGGGGTTGTTGGGGCTGGATCCCGGCAGCTGCCCCCTTTTCCTCGC GAGTTTTGGGTTGCGTTGGG
Product: FtsH family metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MNKPLSPQRWLIALLLGFCLWQGSGLVLQPAPAHAALASALTYDRFLRYVEEGRVTDVRLTDNNLVAEVTAVDPQTQHST RYRVNLLPNTVPQLVDRLTEQGIEVAVVPTRNGSAFWALLGNLVIPLLLLGGLFFFLRRAGGGAGGPGQAMNFGKSRARF QMEAKTGVKFDDVAGIEEAKEELQEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEF VEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRPD VLDAALLRPGRFDRQITVDRPSFKGRYEILRVHARNKKLAEEVSLEAIARRTPGFAGADLANLLNEAAILAARRQRMAIT NQDIEDAIDRITIGLTKPPLLDGKSKRLIAYHECGHALLMTLLPHADPLNKVTIIPRSGGAGGFAQQLPNEEQIDSGMYS RAWLLDRVVVGFGGRAAEEIVFGYSEVTTGASNDLQQNTNLVRQMVTRFGMSELGPLMLDPPNNEVFLGGGWMNRVEYSE DVAAKIDRQVRQILESCYQKAKQILLEHRPLLDRLADTLVERETLDGDEFRAIVSEYVPIPEKVGLPSPFPEAGRSPKLV
Sequences:
>Translated_640_residues MNKPLSPQRWLIALLLGFCLWQGSGLVLQPAPAHAALASALTYDRFLRYVEEGRVTDVRLTDNNLVAEVTAVDPQTQHST RYRVNLLPNTVPQLVDRLTEQGIEVAVVPTRNGSAFWALLGNLVIPLLLLGGLFFFLRRAGGGAGGPGQAMNFGKSRARF QMEAKTGVKFDDVAGIEEAKEELQEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEF VEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRPD VLDAALLRPGRFDRQITVDRPSFKGRYEILRVHARNKKLAEEVSLEAIARRTPGFAGADLANLLNEAAILAARRQRMAIT NQDIEDAIDRITIGLTKPPLLDGKSKRLIAYHECGHALLMTLLPHADPLNKVTIIPRSGGAGGFAQQLPNEEQIDSGMYS RAWLLDRVVVGFGGRAAEEIVFGYSEVTTGASNDLQQNTNLVRQMVTRFGMSELGPLMLDPPNNEVFLGGGWMNRVEYSE DVAAKIDRQVRQILESCYQKAKQILLEHRPLLDRLADTLVERETLDGDEFRAIVSEYVPIPEKVGLPSPFPEAGRSPKLV >Mature_640_residues MNKPLSPQRWLIALLLGFCLWQGSGLVLQPAPAHAALASALTYDRFLRYVEEGRVTDVRLTDNNLVAEVTAVDPQTQHST RYRVNLLPNTVPQLVDRLTEQGIEVAVVPTRNGSAFWALLGNLVIPLLLLGGLFFFLRRAGGGAGGPGQAMNFGKSRARF QMEAKTGVKFDDVAGIEEAKEELQEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEF VEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRPD VLDAALLRPGRFDRQITVDRPSFKGRYEILRVHARNKKLAEEVSLEAIARRTPGFAGADLANLLNEAAILAARRQRMAIT NQDIEDAIDRITIGLTKPPLLDGKSKRLIAYHECGHALLMTLLPHADPLNKVTIIPRSGGAGGFAQQLPNEEQIDSGMYS RAWLLDRVVVGFGGRAAEEIVFGYSEVTTGASNDLQQNTNLVRQMVTRFGMSELGPLMLDPPNNEVFLGGGWMNRVEYSE DVAAKIDRQVRQILESCYQKAKQILLEHRPLLDRLADTLVERETLDGDEFRAIVSEYVPIPEKVGLPSPFPEAGRSPKLV
Specific function: Plays a role in the selective replacement of photosystem II (PSII) protein D1 in the PSII repair cycle following visible- light and UV-B induced damage. If damaged D1 is not removed then new D1 cannot be inserted to restore the PSII reaction center. Seems
COG id: COG0465
COG function: function code O; ATP-dependent Zn proteases
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein; Stromal side. Note=A fraction is found associated with PSII. Localization to the cell inner membrane has been specifically tested and not seen [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the peptidase M41 family [H]
Homologues:
Organism=Homo sapiens, GI300192933, Length=551, Percent_Identity=45.1905626134301, Blast_Score=434, Evalue=1e-121, Organism=Homo sapiens, GI21327685, Length=449, Percent_Identity=47.2160356347439, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI7657689, Length=449, Percent_Identity=47.2160356347439, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI4507173, Length=512, Percent_Identity=41.40625, Blast_Score=386, Evalue=1e-107, Organism=Homo sapiens, GI24497435, Length=243, Percent_Identity=44.8559670781893, Blast_Score=220, Evalue=3e-57, Organism=Homo sapiens, GI4506209, Length=259, Percent_Identity=42.4710424710425, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI21361144, Length=241, Percent_Identity=42.7385892116183, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI24430151, Length=371, Percent_Identity=33.4231805929919, Blast_Score=202, Evalue=8e-52, Organism=Homo sapiens, GI6005942, Length=245, Percent_Identity=44.0816326530612, Blast_Score=201, Evalue=3e-51, Organism=Homo sapiens, GI195539395, Length=246, Percent_Identity=41.4634146341463, Blast_Score=201, Evalue=3e-51, Organism=Homo sapiens, GI89064750, Length=246, Percent_Identity=41.869918699187, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI5729991, Length=246, Percent_Identity=41.869918699187, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI24430155, Length=246, Percent_Identity=41.869918699187, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI45643125, Length=268, Percent_Identity=38.8059701492537, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI157671927, Length=245, Percent_Identity=41.6326530612245, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI45643123, Length=268, Percent_Identity=38.8059701492537, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI40806173, Length=176, Percent_Identity=55.1136363636364, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI4505725, Length=223, Percent_Identity=41.2556053811659, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI229577436, Length=254, Percent_Identity=39.3700787401575, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI5901990, Length=249, Percent_Identity=39.7590361445783, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI194018488, Length=281, Percent_Identity=38.4341637010676, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI14149767, Length=250, Percent_Identity=38.8, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI62177112, Length=250, Percent_Identity=38.8, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI24497618, Length=276, Percent_Identity=36.231884057971, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI153792536, Length=242, Percent_Identity=38.4297520661157, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI226371754, Length=249, Percent_Identity=34.9397590361446, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI17865802, Length=268, Percent_Identity=35.4477611940299, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI11875211, Length=228, Percent_Identity=39.0350877192982, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI40806170, Length=228, Percent_Identity=39.0350877192982, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI31742536, Length=226, Percent_Identity=35.8407079646018, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI112789543, Length=226, Percent_Identity=35.8407079646018, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI7019569, Length=268, Percent_Identity=33.2089552238806, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI156564401, Length=230, Percent_Identity=37.8260869565217, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI31377644, Length=232, Percent_Identity=35.3448275862069, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI310125282, Length=230, Percent_Identity=37.3913043478261, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI310125280, Length=227, Percent_Identity=37.4449339207048, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI64084766, Length=265, Percent_Identity=28.3018867924528, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI116292174, Length=249, Percent_Identity=30.1204819277108, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1789568, Length=599, Percent_Identity=49.2487479131886, Blast_Score=528, Evalue=1e-151, Organism=Caenorhabditis elegans, GI71994521, Length=475, Percent_Identity=50.1052631578947, Blast_Score=412, Evalue=1e-115, Organism=Caenorhabditis elegans, GI115534323, Length=457, Percent_Identity=45.5142231947484, Blast_Score=360, Evalue=2e-99, Organism=Caenorhabditis elegans, GI17554264, Length=457, Percent_Identity=45.0765864332604, Blast_Score=357, Evalue=1e-98, Organism=Caenorhabditis elegans, GI17554786, Length=243, Percent_Identity=45.2674897119342, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI25144278, Length=243, Percent_Identity=45.2674897119342, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI25144281, Length=243, Percent_Identity=45.2674897119342, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17563248, Length=259, Percent_Identity=42.0849420849421, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17508701, Length=320, Percent_Identity=36.875, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17531535, Length=248, Percent_Identity=45.1612903225806, Blast_Score=205, Evalue=7e-53, Organism=Caenorhabditis elegans, GI71987364, Length=246, Percent_Identity=41.869918699187, Blast_Score=204, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71987372, Length=246, Percent_Identity=41.869918699187, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17532375, Length=243, Percent_Identity=44.8559670781893, Blast_Score=203, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17563250, Length=253, Percent_Identity=40.3162055335968, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17505546, Length=246, Percent_Identity=42.2764227642276, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17537217, Length=231, Percent_Identity=43.7229437229437, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17508053, Length=229, Percent_Identity=44.1048034934498, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17554784, Length=390, Percent_Identity=30.7692307692308, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI25153574, Length=226, Percent_Identity=39.8230088495575, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI193209502, Length=227, Percent_Identity=39.647577092511, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI133931034, Length=265, Percent_Identity=38.1132075471698, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI193206114, Length=265, Percent_Identity=38.1132075471698, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI193206116, Length=265, Percent_Identity=38.1132075471698, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17562804, Length=248, Percent_Identity=35.8870967741936, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI86561515, Length=239, Percent_Identity=36.8200836820084, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI133901658, Length=237, Percent_Identity=39.662447257384, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI133901662, Length=236, Percent_Identity=39.4067796610169, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25146157, Length=245, Percent_Identity=37.1428571428571, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17570397, Length=165, Percent_Identity=46.0606060606061, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI32566590, Length=165, Percent_Identity=46.0606060606061, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17508421, Length=243, Percent_Identity=36.6255144032922, Blast_Score=127, Evalue=3e-29, Organism=Caenorhabditis elegans, GI32563584, Length=243, Percent_Identity=36.6255144032922, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17541226, Length=259, Percent_Identity=34.3629343629344, Blast_Score=126, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17541224, Length=259, Percent_Identity=34.3629343629344, Blast_Score=126, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17560432, Length=234, Percent_Identity=35.4700854700855, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71990294, Length=198, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323736, Length=524, Percent_Identity=45.8015267175573, Blast_Score=433, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6320854, Length=585, Percent_Identity=42.2222222222222, Blast_Score=419, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6325281, Length=453, Percent_Identity=45.2538631346578, Blast_Score=374, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6321390, Length=243, Percent_Identity=44.4444444444444, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6322704, Length=257, Percent_Identity=42.8015564202335, Blast_Score=213, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6320077, Length=243, Percent_Identity=45.2674897119342, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6324833, Length=245, Percent_Identity=44.4897959183673, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320197, Length=253, Percent_Identity=40.7114624505929, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324691, Length=253, Percent_Identity=39.5256916996047, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6320602, Length=247, Percent_Identity=42.5101214574899, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6323429, Length=226, Percent_Identity=42.4778761061947, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6322651, Length=283, Percent_Identity=35.3356890459364, Blast_Score=173, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6324000, Length=252, Percent_Identity=41.2698412698413, Blast_Score=173, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6322994, Length=260, Percent_Identity=35, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6321709, Length=241, Percent_Identity=38.1742738589212, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321465, Length=231, Percent_Identity=38.5281385281385, Blast_Score=141, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6325431, Length=252, Percent_Identity=36.1111111111111, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6319554, Length=279, Percent_Identity=31.5412186379928, Blast_Score=134, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6325183, Length=236, Percent_Identity=34.3220338983051, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320887, Length=249, Percent_Identity=32.1285140562249, Blast_Score=124, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6320583, Length=165, Percent_Identity=32.1212121212121, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24665814, Length=556, Percent_Identity=45.5035971223022, Blast_Score=424, Evalue=1e-118, Organism=Drosophila melanogaster, GI28574878, Length=526, Percent_Identity=47.148288973384, Blast_Score=423, Evalue=1e-118, Organism=Drosophila melanogaster, GI24639391, Length=470, Percent_Identity=46.8085106382979, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI24658770, Length=454, Percent_Identity=46.9162995594714, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI19920408, Length=243, Percent_Identity=44.4444444444444, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24651451, Length=245, Percent_Identity=44.4897959183673, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI17137738, Length=259, Percent_Identity=41.3127413127413, Blast_Score=209, Evalue=6e-54, Organism=Drosophila melanogaster, GI17738151, Length=241, Percent_Identity=43.5684647302905, Blast_Score=207, Evalue=3e-53, Organism=Drosophila melanogaster, GI45554047, Length=180, Percent_Identity=56.1111111111111, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI161076486, Length=224, Percent_Identity=44.6428571428571, Blast_Score=205, Evalue=6e-53, Organism=Drosophila melanogaster, GI161076488, Length=224, Percent_Identity=44.6428571428571, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI17137560, Length=224, Percent_Identity=44.6428571428571, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI281365776, Length=229, Percent_Identity=46.2882096069869, Blast_Score=205, Evalue=1e-52, Organism=Drosophila melanogaster, GI24660075, Length=229, Percent_Identity=46.2882096069869, Blast_Score=205, Evalue=1e-52, Organism=Drosophila melanogaster, GI45552965, Length=229, Percent_Identity=46.2882096069869, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24649446, Length=253, Percent_Identity=40.7114624505929, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24640100, Length=246, Percent_Identity=41.0569105691057, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI18860063, Length=384, Percent_Identity=31.7708333333333, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI24663015, Length=246, Percent_Identity=40.2439024390244, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI281361487, Length=244, Percent_Identity=40.1639344262295, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI24656820, Length=270, Percent_Identity=41.8518518518518, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI24656825, Length=270, Percent_Identity=41.8518518518518, Blast_Score=186, Evalue=6e-47, Organism=Drosophila melanogaster, GI19921202, Length=228, Percent_Identity=40.7894736842105, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24652279, Length=190, Percent_Identity=46.3157894736842, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI281363136, Length=234, Percent_Identity=40.5982905982906, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI78707192, Length=234, Percent_Identity=40.5982905982906, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI24644145, Length=243, Percent_Identity=37.037037037037, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI21355121, Length=227, Percent_Identity=36.5638766519824, Blast_Score=149, Evalue=7e-36, Organism=Drosophila melanogaster, GI18859657, Length=239, Percent_Identity=38.4937238493724, Blast_Score=147, Evalue=3e-35, Organism=Drosophila melanogaster, GI281360136, Length=233, Percent_Identity=38.1974248927039, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI24644411, Length=233, Percent_Identity=38.1974248927039, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI281360144, Length=233, Percent_Identity=38.1974248927039, Blast_Score=142, Evalue=7e-34, Organism=Drosophila melanogaster, GI281360140, Length=233, Percent_Identity=38.1974248927039, Blast_Score=142, Evalue=7e-34, Organism=Drosophila melanogaster, GI281360146, Length=233, Percent_Identity=38.1974248927039, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI281360138, Length=233, Percent_Identity=38.1974248927039, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI281360142, Length=233, Percent_Identity=38.1974248927039, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI21357333, Length=233, Percent_Identity=38.1974248927039, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24581396, Length=234, Percent_Identity=38.8888888888889, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI20129529, Length=233, Percent_Identity=36.480686695279, Blast_Score=136, Evalue=6e-32, Organism=Drosophila melanogaster, GI20129423, Length=265, Percent_Identity=34.3396226415094, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI28571849, Length=267, Percent_Identity=35.2059925093633, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI28571847, Length=267, Percent_Identity=35.2059925093633, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI17864540, Length=216, Percent_Identity=37.962962962963, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI28573010, Length=216, Percent_Identity=37.5, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI24639486, Length=208, Percent_Identity=34.6153846153846, Blast_Score=103, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR003960 - InterPro: IPR005936 - InterPro: IPR011546 - InterPro: IPR000642 [H]
Pfam domain/function: PF00004 AAA; PF06480 FtsH_ext; PF01434 Peptidase_M41 [H]
EC number: 3.4.24.-
Molecular weight: Translated: 69885; Mature: 69885
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00674 AAA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPLSPQRWLIALLLGFCLWQGSGLVLQPAPAHAALASALTYDRFLRYVEEGRVTDVRL CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE TDNNLVAEVTAVDPQTQHSTRYRVNLLPNTVPQLVDRLTEQGIEVAVVPTRNGSAFWALL ECCCEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH GNLVIPLLLLGGLFFFLRRAGGGAGGPGQAMNFGKSRARFQMEAKTGVKFDDVAGIEEAK HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHEEEEEHHCCCCHHHHCCHHHHH EELQEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEF HHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEECCHHHH VEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTE HHHHHHCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH MDGFEGNTGIIVIAATNRPDVLDAALLRPGRFDRQITVDRPSFKGRYEILRVHARNKKLA HCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEHHHCHHHH EEVSLEAIARRTPGFAGADLANLLNEAAILAARRQRMAITNQDIEDAIDRITIGLTKPPL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCC LDGKSKRLIAYHECGHALLMTLLPHADPLNKVTIIPRSGGAGGFAQQLPNEEQIDSGMYS CCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCHHHHHCCHHH RAWLLDRVVVGFGGRAAEEIVFGYSEVTTGASNDLQQNTNLVRQMVTRFGMSELGPLMLD HHHHHHHHHHHCCCHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHCCCEEEC PPNNEVFLGGGWMNRVEYSEDVAAKIDRQVRQILESCYQKAKQILLEHRPLLDRLADTLV CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ERETLDGDEFRAIVSEYVPIPEKVGLPSPFPEAGRSPKLV HHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKPLSPQRWLIALLLGFCLWQGSGLVLQPAPAHAALASALTYDRFLRYVEEGRVTDVRL CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE TDNNLVAEVTAVDPQTQHSTRYRVNLLPNTVPQLVDRLTEQGIEVAVVPTRNGSAFWALL ECCCEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH GNLVIPLLLLGGLFFFLRRAGGGAGGPGQAMNFGKSRARFQMEAKTGVKFDDVAGIEEAK HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHEEEEEHHCCCCHHHHCCHHHHH EELQEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEF HHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEECCHHHH VEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTE HHHHHHCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH MDGFEGNTGIIVIAATNRPDVLDAALLRPGRFDRQITVDRPSFKGRYEILRVHARNKKLA HCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEHHHCHHHH EEVSLEAIARRTPGFAGADLANLLNEAAILAARRQRMAITNQDIEDAIDRITIGLTKPPL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCC LDGKSKRLIAYHECGHALLMTLLPHADPLNKVTIIPRSGGAGGFAQQLPNEEQIDSGMYS CCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCHHHHHCCHHH RAWLLDRVVVGFGGRAAEEIVFGYSEVTTGASNDLQQNTNLVRQMVTRFGMSELGPLMLD HHHHHHHHHHHCCCHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHCCCEEEC PPNNEVFLGGGWMNRVEYSEDVAAKIDRQVRQILESCYQKAKQILLEHRPLLDRLADTLV CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ERETLDGDEFRAIVSEYVPIPEKVGLPSPFPEAGRSPKLV HHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 12069591 [H]