Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86607506
Identifier: 86607506
GI number: 86607506
Start: 2443
End: 3264
Strand: Reverse
Name: 86607506
Synonym: CYB_0003
Alternate gene names: NA
Gene position: 3264-2443 (Counterclockwise)
Preceding gene: 86607507
Following gene: NA
Centisome position: 0.11
GC content: 61.92
Gene sequence:
>822_bases ATGCTCTCTTCGCTCTCTGCTTTGCCGGTTCACCTTTATCGCTGCCTGAGCTGCGGTCGGGAAGGGCTGACCCAAGCACC AGGGCGGGAGCAGGGATCCGTGGCAGATCGGGTTTATTGTCCCAGTTGTGGCCAAATTTACCCCATCACCGCTTCTGGGG CTGTGGATTTTATCGGCAGCTCATCGGACCTGCATCTCACGCCGGCCCAAGCCATTGCCCATCTGCCTGGGTTTGCCTGG GGCTACGATCGCCTCTGGCGGCCCTGGGCTCTGTCGCTGCTGACGGGAGAGAGCTTTGGCAGCGAGCGGGAGAGTCAACT GCTGGCCGAGTTGGTGGGGGAGGGGGATCCCATCTTGGATTTGGGCACTGCCGGGGGGTACTGGAGCCGCTTGATTCTGG CCAGGGATCCGCAGCGGACGGTGGTCGGCCTGGACAATGCGGCAGGGGTATTGGCGGAAGCCGCTCAACAGGCACAGCCC CACTGGCAGCACTACAGCCTGATGCGGGCCCGAGCCGAACAGCTTCCCCTCGCCTCTGGAACTTTTGGGGCGGTGATCAG TGGGGCGACCTTGAACGAAGTGCCTTTGGATCCCTGTTTGCGGGAAATTGCCCGCGTCTTGAAACCGGGAGGGGCCTTTG TCTCGATGCACAGCCAGCAGGTACAGGGATGGGGGCAGATGGTGCAGCAATGGCTGGAAGCCACCGGCCTTCATTTTTTC TCAGAAACCCAGTTGCGCGAGCACCTTCAACAGGTGGGGCTGCAGTTGGAGCGTTATCTCAGCTTGGGTTGGGTGGCCTT TGTGCGGGCGGTGCGCCTCTGA
Upstream 100 bases:
>100_bases CATCTCCATTGCCAGATAGACAACTGGGGGGGTTGTTGGGGCTGGATCCCGGCAGCTGCCCCCTTTTCCTCGCGAGTTTT GGGTTGCGTTGGGCTGTCGC
Downstream 100 bases:
>100_bases TCTTGGCCGGGTTAAGTTGTGCAGTGGCCATCGAGTCGATGTCGGAGCCATTACCCCAATCCAAGTCATGCCGATCCCTG GCTCCCCTCTTCCACCAAGA
Product: hypothetical protein
Products: S-adenosyl-L-homocysteine; ubiquinone-9
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLSSLSALPVHLYRCLSCGREGLTQAPGREQGSVADRVYCPSCGQIYPITASGAVDFIGSSSDLHLTPAQAIAHLPGFAW GYDRLWRPWALSLLTGESFGSERESQLLAELVGEGDPILDLGTAGGYWSRLILARDPQRTVVGLDNAAGVLAEAAQQAQP HWQHYSLMRARAEQLPLASGTFGAVISGATLNEVPLDPCLREIARVLKPGGAFVSMHSQQVQGWGQMVQQWLEATGLHFF SETQLREHLQQVGLQLERYLSLGWVAFVRAVRL
Sequences:
>Translated_273_residues MLSSLSALPVHLYRCLSCGREGLTQAPGREQGSVADRVYCPSCGQIYPITASGAVDFIGSSSDLHLTPAQAIAHLPGFAW GYDRLWRPWALSLLTGESFGSERESQLLAELVGEGDPILDLGTAGGYWSRLILARDPQRTVVGLDNAAGVLAEAAQQAQP HWQHYSLMRARAEQLPLASGTFGAVISGATLNEVPLDPCLREIARVLKPGGAFVSMHSQQVQGWGQMVQQWLEATGLHFF SETQLREHLQQVGLQLERYLSLGWVAFVRAVRL >Mature_273_residues MLSSLSALPVHLYRCLSCGREGLTQAPGREQGSVADRVYCPSCGQIYPITASGAVDFIGSSSDLHLTPAQAIAHLPGFAW GYDRLWRPWALSLLTGESFGSERESQLLAELVGEGDPILDLGTAGGYWSRLILARDPQRTVVGLDNAAGVLAEAAQQAQP HWQHYSLMRARAEQLPLASGTFGAVISGATLNEVPLDPCLREIARVLKPGGAFVSMHSQQVQGWGQMVQQWLEATGLHFF SETQLREHLQQVGLQLERYLSLGWVAFVRAVRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.64
Molecular weight: Translated: 29731; Mature: 29731
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSLSALPVHLYRCLSCGREGLTQAPGREQGSVADRVYCPSCGQIYPITASGAVDFIGS CCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCHHCCCC SSDLHLTPAQAIAHLPGFAWGYDRLWRPWALSLLTGESFGSERESQLLAELVGEGDPILD CCCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEE LGTAGGYWSRLILARDPQRTVVGLDNAAGVLAEAAQQAQPHWQHYSLMRARAEQLPLASG ECCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC TFGAVISGATLNEVPLDPCLREIARVLKPGGAFVSMHSQQVQGWGQMVQQWLEATGLHFF CHHHHEECCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHH SETQLREHLQQVGLQLERYLSLGWVAFVRAVRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSSLSALPVHLYRCLSCGREGLTQAPGREQGSVADRVYCPSCGQIYPITASGAVDFIGS CCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCHHCCCC SSDLHLTPAQAIAHLPGFAWGYDRLWRPWALSLLTGESFGSERESQLLAELVGEGDPILD CCCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEE LGTAGGYWSRLILARDPQRTVVGLDNAAGVLAEAAQQAQPHWQHYSLMRARAEQLPLASG ECCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC TFGAVISGATLNEVPLDPCLREIARVLKPGGAFVSMHSQQVQGWGQMVQQWLEATGLHFF CHHHHEECCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHH SETQLREHLQQVGLQLERYLSLGWVAFVRAVRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; 3-demethylubiquinone-9
Specific reaction: S-adenosyl-L-methionine + 3-demethylubiquinone-9 = S-adenosyl-L-homocysteine + ubiquinone-9
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA