Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
---|---|
Accession | NC_007766 |
Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is mocBf
Identifier: 86361030
GI number: 86361030
Start: 337543
End: 338472
Strand: Reverse
Name: mocBf
Synonym: RHE_PF00300
Alternate gene names: 86361030
Gene position: 338472-337543 (Counterclockwise)
Preceding gene: 86361031
Following gene: 86361029
Centisome position: 52.68
GC content: 60.75
Gene sequence:
>930_bases ATGAAAACCGCCACGCTTGCATCCATCGCCTTGGCGATGTCGGTCACTGTCGCGAATGCGCAGACGATCGGCGTCTCAAT GTCCGATCTCGATAAATTCAGAACGGCGCTGCTGAACGGCGTCGTCAACCACGGGCAGACAATATCAGGCCTCAAGCTCG TCACCGAAAACGCGAAGGGCGACAACGAGCTGCAGAAGAAGCAGGTTCAGAAGCTGATTGCCGACAAGGTCGATGCCATC ATCCTGGCCGTTTCCGATGGCGATCTCGGGCCGCAGATGACCAAGATGGCGGCGGATGCCGGCATTCCGCTGGTTTACAT CAATAACGTCCCATCCAATCTTCTGGATCTTCCCGAAAACCAGGTGGTGGTCGCCTCCAACGAGAAGGAATCCGGCACGC TGGAGACAAAGCAGGTCTGCGCTCTGCTCACGGGCAAGGGCCGTGTCGCCGTGCTGATGGGCGAACCCTTCCACGCGGCC GCCCGCGCCCGCACCCAGGACATCTCCGATGTCATCGCCACGCCCGAGTGTAAGGGCCTTGAAATCGTCGAGCGGCAGGC GGCCTATTGGTCGCGCGATTATGCCGACCTGCAGATGCAGGAATGGCTTTCGGCCGGCGTCAAATTCGATGCCGTTATCG CCAACAATGACGAGATGGCGCTTGGCGCGATCCGCGCCATGAAGAAGGCCGGCATCCCGATGAAGGACGTCGTCGTCGCC GGCGTCGACGCGACTGATGATGCGCTCGCTGCGATGACGGCCGGCGATCTTGATGTCACCATTCTCCAGAGCGCCGTCGG GCAGGGGGCGGCGGCAGTCGACGCGGCCGTCAAGCTCGTCAACAAGGAGAAGGTGCCGCGCGAAAACAACGTTCCCTTCG AACTCGTCACCCCTCAGAACATTGCCCAATACCTGCCGAAGAGCCAGTGA
Upstream 100 bases:
>100_bases GCTTTCCATCCCCTGCGTTAGTTCTCGCTTTCGCACAAAAAGTAAAATTTAACCAAGATTTGAAATAACGCCATTCTATC CGAATTGCGCAGGGGAATTC
Downstream 100 bases:
>100_bases GCATAAGAGGCCTATGATGTTGCATTTCTGGAATAAATTCGGCATTCGCGCGCAGATCACCGCAGGCTTCGTGCCGCTGA TCCTGCTGATGAGCCTGCTG
Product: rhizopine ABC transporter, substrate-binding protein
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKTATLASIALAMSVTVANAQTIGVSMSDLDKFRTALLNGVVNHGQTISGLKLVTENAKGDNELQKKQVQKLIADKVDAI ILAVSDGDLGPQMTKMAADAGIPLVYINNVPSNLLDLPENQVVVASNEKESGTLETKQVCALLTGKGRVAVLMGEPFHAA ARARTQDISDVIATPECKGLEIVERQAAYWSRDYADLQMQEWLSAGVKFDAVIANNDEMALGAIRAMKKAGIPMKDVVVA GVDATDDALAAMTAGDLDVTILQSAVGQGAAAVDAAVKLVNKEKVPRENNVPFELVTPQNIAQYLPKSQ
Sequences:
>Translated_309_residues MKTATLASIALAMSVTVANAQTIGVSMSDLDKFRTALLNGVVNHGQTISGLKLVTENAKGDNELQKKQVQKLIADKVDAI ILAVSDGDLGPQMTKMAADAGIPLVYINNVPSNLLDLPENQVVVASNEKESGTLETKQVCALLTGKGRVAVLMGEPFHAA ARARTQDISDVIATPECKGLEIVERQAAYWSRDYADLQMQEWLSAGVKFDAVIANNDEMALGAIRAMKKAGIPMKDVVVA GVDATDDALAAMTAGDLDVTILQSAVGQGAAAVDAAVKLVNKEKVPRENNVPFELVTPQNIAQYLPKSQ >Mature_309_residues MKTATLASIALAMSVTVANAQTIGVSMSDLDKFRTALLNGVVNHGQTISGLKLVTENAKGDNELQKKQVQKLIADKVDAI ILAVSDGDLGPQMTKMAADAGIPLVYINNVPSNLLDLPENQVVVASNEKESGTLETKQVCALLTGKGRVAVLMGEPFHAA ARARTQDISDVIATPECKGLEIVERQAAYWSRDYADLQMQEWLSAGVKFDAVIANNDEMALGAIRAMKKAGIPMKDVVVA GVDATDDALAAMTAGDLDVTILQSAVGQGAAAVDAAVKLVNKEKVPRENNVPFELVTPQNIAQYLPKSQ
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism. Could be involved in its high affinity transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788473, Length=333, Percent_Identity=28.2282282282282, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1790192, Length=305, Percent_Identity=30.8196721311475, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: 4720 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 32679; Mature: 32679
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTATLASIALAMSVTVANAQTIGVSMSDLDKFRTALLNGVVNHGQTISGLKLVTENAKG CCCHHHHHHHHHHHEEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC DNELQKKQVQKLIADKVDAIILAVSDGDLGPQMTKMAADAGIPLVYINNVPSNLLDLPEN CHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHCCCCC QVVVASNEKESGTLETKQVCALLTGKGRVAVLMGEPFHAAARARTQDISDVIATPECKGL CEEEECCCCCCCCCHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCH EIVERQAAYWSRDYADLQMQEWLSAGVKFDAVIANNDEMALGAIRAMKKAGIPMKDVVVA HHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHEEEE GVDATDDALAAMTAGDLDVTILQSAVGQGAAAVDAAVKLVNKEKVPRENNVPFELVTPQN CCCCCCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECHHH IAQYLPKSQ HHHHCCCCC >Mature Secondary Structure MKTATLASIALAMSVTVANAQTIGVSMSDLDKFRTALLNGVVNHGQTISGLKLVTENAKG CCCHHHHHHHHHHHEEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC DNELQKKQVQKLIADKVDAIILAVSDGDLGPQMTKMAADAGIPLVYINNVPSNLLDLPEN CHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHCCCCC QVVVASNEKESGTLETKQVCALLTGKGRVAVLMGEPFHAAARARTQDISDVIATPECKGL CEEEECCCCCCCCCHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCH EIVERQAAYWSRDYADLQMQEWLSAGVKFDAVIANNDEMALGAIRAMKKAGIPMKDVVVA HHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHEEEE GVDATDDALAAMTAGDLDVTILQSAVGQGAAAVDAAVKLVNKEKVPRENNVPFELVTPQN CCCCCCHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECHHH IAQYLPKSQ HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]