Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360983
Identifier: 86360983
GI number: 86360983
Start: 270224
End: 271357
Strand: Reverse
Name: 86360983
Synonym: RHE_PF00253
Alternate gene names: NA
Gene position: 271357-270224 (Counterclockwise)
Preceding gene: 86360984
Following gene: 86360982
Centisome position: 42.23
GC content: 63.23
Gene sequence:
>1134_bases ATGAATGCATCCAGCAAACCTTCGAAGGTCGTTGTCATCGGCGGCGGTATTTTCGGCGTCTCGACCGCGCTCCATTTGGC GCGGCTCGGGGCTGATACCCTGCTTGTCAATGATGGCCCGCTTGCCAACGGTGCGTCCGGCCGGTCGCTCGCTTGGTTGA ACTCGGCGCGAAAACGCTCCGATGCCTATCACCGGCTGCGTCTCGCAGGCATTGACCGCTATCGCACGCTAGCTGCTCGA TATCCCGATGCGCCGTGGCTGCGCTTCGACGGCGGCCTGACCTGGGACGCGGACGACGCCACCAACGAGATCGCTGAAAT CTTCGACTATGAGCGTAACCTCGGCTATCACGCGCAATGGCTCACGCCGGAGAAGATCGCTGCGGTGACGCCCGGCGTCG ATCCAAGCACCGTGACGCCGCAAGGCGCAATCTTCAACCCCGGGGAGGGGTGGGTCGATCTTCCATCTCTGATCGGCAGG CTTGCGGAAGAATTCAGCGCGTTGGGCGGTGAGATCATCAGGGATGCCGGACGCGCGGCGGTCGATGTCAGGAATGCGCG TGCCCGCGGCGTCATCACGGCGGACGGCACGCGTCACGACGCCGACGCCGTGCTGCTCGCTGCAGGCAGCGAGGTTCCCG CAATTGTTGCGAAGGCTGGCCAGCAGATCGAGGATGCGACATCCGTCGCCCTTCTTGTCAGGACAAAGCCGATCCGCCAC CCGCTCAAGGCCGTCCTCAACACCCCGCGCGTCGCCATTCGACCGATGCCCAATGGCGGCTTCGCACTGGATTCCGCCTG GTCGGAGGAAGAGGTGAGCGCCAACCCCGATGGTAGCTACAATGTCAGGCAATCGACGCTGCAGGGACTGCTGCGAGAAG CGTCGAGAGTCCTCGAAGGCAATCCGGTGCTTGAGATCGAAGATTATGGGATCGGGCCGAAACCTATTCCGGGTGATGGC GACCCTGTTTTCGGCGAGCTGTCATCAATTCAGGGTTATTTCGTCGCCTTCAGCCATAGCGGGGCCACCCTCGGCCTGAT CGCCGGCGAGTTGTTGGCGGACGAGATCGCAATGGGCTGCCGCCACCCGCTGCTTGCGGACTTCCGCCCCGAGCGGTTCA GTACAGCGTCCTGA
Upstream 100 bases:
>100_bases GTGCGGCTGAAGCGCTTCCTTGCGGAAGTTCTCTGAGGCGCCAGCCCGTAACGCGTGCAATTCGGTTCGATCAAGCAAGA GCAGAAACAGGGTACCCGAC
Downstream 100 bases:
>100_bases TGACCGCCACGAGGTGGTCGTCCGCCTGACCGGCACGGATCAATTAGAGCTATCGAGCGTTCTGCCGGGAGGAACCAAAG GGAGACCCATCATGTCCAAG
Product: D-amino acid oxidase protein
Products: NA
Alternate protein names: Fructosyl-Amino Acid Oxidase; D-Amino Acid Oxidase Protein; Oxidoreductase; Glycine/D-Amino Acid Oxidase Deaminating; D-Amino Acid Oxidase; Oxidase; Fructosyl Amino Acid Oxidase
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MNASSKPSKVVVIGGGIFGVSTALHLARLGADTLLVNDGPLANGASGRSLAWLNSARKRSDAYHRLRLAGIDRYRTLAAR YPDAPWLRFDGGLTWDADDATNEIAEIFDYERNLGYHAQWLTPEKIAAVTPGVDPSTVTPQGAIFNPGEGWVDLPSLIGR LAEEFSALGGEIIRDAGRAAVDVRNARARGVITADGTRHDADAVLLAAGSEVPAIVAKAGQQIEDATSVALLVRTKPIRH PLKAVLNTPRVAIRPMPNGGFALDSAWSEEEVSANPDGSYNVRQSTLQGLLREASRVLEGNPVLEIEDYGIGPKPIPGDG DPVFGELSSIQGYFVAFSHSGATLGLIAGELLADEIAMGCRHPLLADFRPERFSTAS
Sequences:
>Translated_377_residues MNASSKPSKVVVIGGGIFGVSTALHLARLGADTLLVNDGPLANGASGRSLAWLNSARKRSDAYHRLRLAGIDRYRTLAAR YPDAPWLRFDGGLTWDADDATNEIAEIFDYERNLGYHAQWLTPEKIAAVTPGVDPSTVTPQGAIFNPGEGWVDLPSLIGR LAEEFSALGGEIIRDAGRAAVDVRNARARGVITADGTRHDADAVLLAAGSEVPAIVAKAGQQIEDATSVALLVRTKPIRH PLKAVLNTPRVAIRPMPNGGFALDSAWSEEEVSANPDGSYNVRQSTLQGLLREASRVLEGNPVLEIEDYGIGPKPIPGDG DPVFGELSSIQGYFVAFSHSGATLGLIAGELLADEIAMGCRHPLLADFRPERFSTAS >Mature_377_residues MNASSKPSKVVVIGGGIFGVSTALHLARLGADTLLVNDGPLANGASGRSLAWLNSARKRSDAYHRLRLAGIDRYRTLAAR YPDAPWLRFDGGLTWDADDATNEIAEIFDYERNLGYHAQWLTPEKIAAVTPGVDPSTVTPQGAIFNPGEGWVDLPSLIGR LAEEFSALGGEIIRDAGRAAVDVRNARARGVITADGTRHDADAVLLAAGSEVPAIVAKAGQQIEDATSVALLVRTKPIRH PLKAVLNTPRVAIRPMPNGGFALDSAWSEEEVSANPDGSYNVRQSTLQGLLREASRVLEGNPVLEIEDYGIGPKPIPGDG DPVFGELSSIQGYFVAFSHSGATLGLIAGELLADEIAMGCRHPLLADFRPERFSTAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40044; Mature: 40044
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASSKPSKVVVIGGGIFGVSTALHLARLGADTLLVNDGPLANGASGRSLAWLNSARKRS CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEHHHHHHHHHH DAYHRLRLAGIDRYRTLAARYPDAPWLRFDGGLTWDADDATNEIAEIFDYERNLGYHAQW HHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCEEECCCHHHHHHHHHHHHHHCCCCEEEE LTPEKIAAVTPGVDPSTVTPQGAIFNPGEGWVDLPSLIGRLAEEFSALGGEIIRDAGRAA CCHHHHEEECCCCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCE VDVRNARARGVITADGTRHDADAVLLAAGSEVPAIVAKAGQQIEDATSVALLVRTKPIRH EEECCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHCCCHHHHHHHEEEEEECCCHHH PLKAVLNTPRVAIRPMPNGGFALDSAWSEEEVSANPDGSYNVRQSTLQGLLREASRVLEG HHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC NPVLEIEDYGIGPKPIPGDGDPVFGELSSIQGYFVAFSHSGATLGLIAGELLADEIAMGC CCEEEEECCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHC RHPLLADFRPERFSTAS CCCCCCCCCCCCCCCCC >Mature Secondary Structure MNASSKPSKVVVIGGGIFGVSTALHLARLGADTLLVNDGPLANGASGRSLAWLNSARKRS CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEHHHHHHHHHH DAYHRLRLAGIDRYRTLAARYPDAPWLRFDGGLTWDADDATNEIAEIFDYERNLGYHAQW HHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCEEECCCHHHHHHHHHHHHHHCCCCEEEE LTPEKIAAVTPGVDPSTVTPQGAIFNPGEGWVDLPSLIGRLAEEFSALGGEIIRDAGRAA CCHHHHEEECCCCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCE VDVRNARARGVITADGTRHDADAVLLAAGSEVPAIVAKAGQQIEDATSVALLVRTKPIRH EEECCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHCCCHHHHHHHEEEEEECCCHHH PLKAVLNTPRVAIRPMPNGGFALDSAWSEEEVSANPDGSYNVRQSTLQGLLREASRVLEG HHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC NPVLEIEDYGIGPKPIPGDGDPVFGELSSIQGYFVAFSHSGATLGLIAGELLADEIAMGC CCEEEEECCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHC RHPLLADFRPERFSTAS CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA