Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360982
Identifier: 86360982
GI number: 86360982
Start: 269623
End: 270132
Strand: Reverse
Name: 86360982
Synonym: RHE_PF00252
Alternate gene names: NA
Gene position: 270132-269623 (Counterclockwise)
Preceding gene: 86360983
Following gene: 86360978
Centisome position: 42.04
GC content: 63.33
Gene sequence:
>510_bases ATGTCCAAGGATCAAGCCGCCTTCGACGCCGAAGATAACCGCGGCGATGCCGCCGCTTCGCTGCCGAATGGAGAAGAACC GACCATCAATCCGGATCTCATTCGGCGTGAGGGGTTCGTGAGCGAGGCAGAATACCGGGCCTACTTTGCCGAATTGGGCA GAGATGTGTCCGCTCCGACCGAAGATCAGGTGGGCGAACCGGTGCGGAGCTCCGGGGAGCGCATCCTGGAAAACCGGATG CAGGAATTGAGGTGGGAACTCGAAATACTTCGGGCTCGCCTTCATGGAATCCGACGCCAGGCCGCGACCGTCGTGACCGA AAACGTCCGATGGGCTGATTCAAGCGCCCATGCCCAACTCGGCGACCAGCCCTGGCTGAAGCTCGCCGGCGCGATGGCGG GTGCCTTCGTCATCACAAGGGGGCTGAGACGGCTGCCGTGGGGAACGGTCGTGACAACGGCGCTGCCCCTGGCGGTCGCT GCGATGAATCGAAAGCCTGCCCGGCGGTGA
Upstream 100 bases:
>100_bases GCGTCCTGATGACCGCCACGAGGTGGTCGTCCGCCTGACCGGCACGGATCAATTAGAGCTATCGAGCGTTCTGCCGGGAG GAACCAAAGGGAGACCCATC
Downstream 100 bases:
>100_bases CGGCGCGCGGATGGTTCTGCGTGAGATCGCGCGTCGGATTCTTCACCCTGGAACGGACGCCATCATCTCGCCGAAGTGTT CGTGACATGCTACTGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSKDQAAFDAEDNRGDAAASLPNGEEPTINPDLIRREGFVSEAEYRAYFAELGRDVSAPTEDQVGEPVRSSGERILENRM QELRWELEILRARLHGIRRQAATVVTENVRWADSSAHAQLGDQPWLKLAGAMAGAFVITRGLRRLPWGTVVTTALPLAVA AMNRKPARR
Sequences:
>Translated_169_residues MSKDQAAFDAEDNRGDAAASLPNGEEPTINPDLIRREGFVSEAEYRAYFAELGRDVSAPTEDQVGEPVRSSGERILENRM QELRWELEILRARLHGIRRQAATVVTENVRWADSSAHAQLGDQPWLKLAGAMAGAFVITRGLRRLPWGTVVTTALPLAVA AMNRKPARR >Mature_168_residues SKDQAAFDAEDNRGDAAASLPNGEEPTINPDLIRREGFVSEAEYRAYFAELGRDVSAPTEDQVGEPVRSSGERILENRMQ ELRWELEILRARLHGIRRQAATVVTENVRWADSSAHAQLGDQPWLKLAGAMAGAFVITRGLRRLPWGTVVTTALPLAVAA MNRKPARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18719; Mature: 18588
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDQAAFDAEDNRGDAAASLPNGEEPTINPDLIRREGFVSEAEYRAYFAELGRDVSAPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC EDQVGEPVRSSGERILENRMQELRWELEILRARLHGIRRQAATVVTENVRWADSSAHAQL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GDQPWLKLAGAMAGAFVITRGLRRLPWGTVVTTALPLAVAAMNRKPARR CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SKDQAAFDAEDNRGDAAASLPNGEEPTINPDLIRREGFVSEAEYRAYFAELGRDVSAPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC EDQVGEPVRSSGERILENRMQELRWELEILRARLHGIRRQAATVVTENVRWADSSAHAQL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GDQPWLKLAGAMAGAFVITRGLRRLPWGTVVTTALPLAVAAMNRKPARR CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA