Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is yhbW [C]
Identifier: 86360926
GI number: 86360926
Start: 204051
End: 205127
Strand: Reverse
Name: yhbW [C]
Synonym: RHE_PF00195
Alternate gene names: 86360926
Gene position: 205127-204051 (Counterclockwise)
Preceding gene: 86360927
Following gene: 86360925
Centisome position: 31.93
GC content: 62.58
Gene sequence:
>1077_bases ATGAAATTCGCAGTATCGCTGACCATGGAGCGCTTCTCGTCCGACATTCCGATGTCGACGGTCAAGAACAATCTCCTGCA ATTGGCACGGATGGCCGACGAAGGCGGTTTCGAGGCGCTGTGGACCGCCGAGCACCACACGATCGAATGCACGATCTCTC CCAATCCGTTCCAGACGCTGGTCTGGCTGGCGCAGCACACGCAGCAGATCCGCCTGGGCACCTCGACGCTGGTTGCGCCC TACTGGACCCCGATCCGTCTCGCCGGTGAATCCGCGCTCTGCGATCATCTGACCAACGGCCGCCTGGAATTCGGCATCGC CCGCGGCTCGTACCAGTATGAGTTCGACCGGATGGCCGGCGGCATGCCGCAGCAGGAAGGCGTCGCCTACATGAAGGAGA TCGTCCCGGCTGTGAAGAAGCTCTGGGCCGGCGACTACGCCCATGACGGGCACTACTGGAAATTCCCGACCGCCACGTCT GTGCCGAAGCCGCTTCAGCAGCCGCATCCGCCGATCTGGGTCGCGGCCCGCGATGCCGGCTCCTTCGACTGGGCGATCGC CAATGGCGCCAGCATCCTCTCCACGCCGCTCTCGCAGCCGGCAGCCGAGATCCAGGTCCTCGCCGACAAGTTCAACAAGG CGGTTGCCGATCATCCCGAGGTACCGCGCCCGCGCTTCATGATGCAGCGCCGCACCTGCGTCTACGACAAGGCTGACGGC TGGGAACTGGCGGTCAGGCACAGCATGGACTACGGCCGCGCCTTCGAAAATCTGATGCAGAATATCGGCATGGTGCGCGA AGGCTTTCCGGAGGCTGTGCCCTACGATGCGGTGAAGGGCAAGGACAACTACAATCCGGACAATATCCGCAGGAATCTGA TGTTCGGCACGCCCGACGAGGCGATCGAGAAGCTGCTGGTCTATGAAGAAGCCGGTGTTGATCAGTACTGTCTCGGCCTG ACCTTCAACCTGCCCTTCGAGCTGCAGAAGCGGACGATCGAGCTGTTCGTCGAGGAAATCATGCCCTTCTTCGCCGCGCG CGAAAAGGACAAGCAGCGCAAGGCGGCGGCAGGCTGA
Upstream 100 bases:
>100_bases GAACGTCATCATCGATTATTCCGGGGCGATGCAGGACCCGTTCGTCATCCGTCTGAAGTGACGGCACGCACAAAACTGAA CCCGAAAGGGAGGCAAGCAG
Downstream 100 bases:
>100_bases CATGGCAGAGGCACAGCGCTATACCGTCGGAGACGTGACGCTCAACTACCGGATCGACGGTAGCGGCGAGCCTCTGGTCT GCATTCACGGCGTCGGCTCC
Product: putative oxidoreductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTLVWLAQHTQQIRLGTSTLVAP YWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATS VPKPLQQPHPPIWVAARDAGSFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDEAIEKLLVYEEAGVDQYCLGL TFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG
Sequences:
>Translated_358_residues MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTLVWLAQHTQQIRLGTSTLVAP YWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATS VPKPLQQPHPPIWVAARDAGSFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDEAIEKLLVYEEAGVDQYCLGL TFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG >Mature_358_residues MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTLVWLAQHTQQIRLGTSTLVAP YWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATS VPKPLQQPHPPIWVAARDAGSFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDEAIEKLLVYEEAGVDQYCLGL TFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 40393; Mature: 40393
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTL CEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHH VWLAQHTQQIRLGTSTLVAPYWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAG HHHHHHHHHHCCCCCEEECCCCCCEEECCCHHHHHHHCCCCEEEEEECCCCEEEHHHHCC GMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATSVPKPLQQPHPPIWVAARDAG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHCCCCCCEEEEECCCC SFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG CCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCC WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDE CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHH AIEKLLVYEEAGVDQYCLGLTFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTL CEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHH VWLAQHTQQIRLGTSTLVAPYWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAG HHHHHHHHHHCCCCCEEECCCCCCEEECCCHHHHHHHCCCCEEEEEECCCCEEEHHHHCC GMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATSVPKPLQQPHPPIWVAARDAG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHCCCCCCEEEEECCCC SFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG CCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCC WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDE CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHH AIEKLLVYEEAGVDQYCLGLTFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424; 8796346 [H]