Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360910
Identifier: 86360910
GI number: 86360910
Start: 189730
End: 190614
Strand: Reverse
Name: 86360910
Synonym: RHE_PF00179
Alternate gene names: NA
Gene position: 190614-189730 (Counterclockwise)
Preceding gene: 86360911
Following gene: 86360905
Centisome position: 29.67
GC content: 62.71
Gene sequence:
>885_bases ATGATTCCGATAACGGTCGTCAGGAACGGCAAGGGACCGACTGCGCTTCTGACCGGCGGCAATCACGGCGACGAGTACGA GGGACCGATCGCGCTCTTCGATCTCGCCCGCGCGTTGCAGGCAGAGGAGGTGAGCGGCGCTGTCATCATCGTGCCGGCAA TGAATTACCCAGCATTCCTTGCGGGAACCCGGACCTCGCCGATCGACAGAGGCAATATGAACCGCAGCTTCCCGGGTCGT CCGGACGGCACGGTGACCGAAAAGATCGCCGATTATTTTCAGCGTGTGCTTCTGCCGATGGCGGATATCGTCCTTGACTT CCATTCCGGCGGAAAGACGCTCGATTTTCTGCCCTTCTGTGCCGCGCACATTCTGCCCAACAAGCAGCAGGAGCAAAAAG CCTTCGACTTCGTCACGGCGTTTGCCGCGCCCTATTCGATGACGATGCTGGAGATCGATGCGGTCGGCATGTACGACACG GCGGCCGAGGAAATGGGCAAGATCTTCATCACCACCGAACTCGGCGGCGGCGGCACCGCGACCGCCAAGAGTGCGGCGAT CGCCAAACGCGGCGTGATAAACGTGCTGCGACATGCGAGGATCGTCGCCGGCGCCGTCGATAGCGGTCCGACGACCTGGC TGGACATGCCGGATGGCCGCTGTTTCTCCTTCGCGGAGGAGGGTGGATTGATCGAAGCCGTCATCGACCTTGGTGACGTC GTCACCGAGGGTGCGGTCATCGCTCGCATCTATCCGACCGGGCGGACGGGTGAGGCGCCGCGCGAGATCCGCGCCGCCAT GGACGGTATTCTCTGCGCCCGGCATTTTCCGGGGCTCGTCAAACCAGGCGACTGCGTTGCGGTGATCGCGACGGTGACGC GCTGA
Upstream 100 bases:
>100_bases GTCGCCGATCAGCGCGACGGTCGATTTCACCGCCGAGGGCGTCCAGCACGGTTTCCTGAGGCTGCCTTACAGCCGCGACG ACTCCGCCTGGGGATCGGTG
Downstream 100 bases:
>100_bases GATGACGGGCAGGCGCGGCGAGATGCGTTTCGCCGGCCGGCCATCTCAAGCCGCTTTCGGCGATCTCGATCCGGCAGCTG CCGCATCGATCTGGAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Deacylase; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinylglutamatedesuccinylase/Aspartoacylase; Succinylglutamate Desuccinylase; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinate Dehydrogenase Subunit
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MIPITVVRNGKGPTALLTGGNHGDEYEGPIALFDLARALQAEEVSGAVIIVPAMNYPAFLAGTRTSPIDRGNMNRSFPGR PDGTVTEKIADYFQRVLLPMADIVLDFHSGGKTLDFLPFCAAHILPNKQQEQKAFDFVTAFAAPYSMTMLEIDAVGMYDT AAEEMGKIFITTELGGGGTATAKSAAIAKRGVINVLRHARIVAGAVDSGPTTWLDMPDGRCFSFAEEGGLIEAVIDLGDV VTEGAVIARIYPTGRTGEAPREIRAAMDGILCARHFPGLVKPGDCVAVIATVTR
Sequences:
>Translated_294_residues MIPITVVRNGKGPTALLTGGNHGDEYEGPIALFDLARALQAEEVSGAVIIVPAMNYPAFLAGTRTSPIDRGNMNRSFPGR PDGTVTEKIADYFQRVLLPMADIVLDFHSGGKTLDFLPFCAAHILPNKQQEQKAFDFVTAFAAPYSMTMLEIDAVGMYDT AAEEMGKIFITTELGGGGTATAKSAAIAKRGVINVLRHARIVAGAVDSGPTTWLDMPDGRCFSFAEEGGLIEAVIDLGDV VTEGAVIARIYPTGRTGEAPREIRAAMDGILCARHFPGLVKPGDCVAVIATVTR >Mature_294_residues MIPITVVRNGKGPTALLTGGNHGDEYEGPIALFDLARALQAEEVSGAVIIVPAMNYPAFLAGTRTSPIDRGNMNRSFPGR PDGTVTEKIADYFQRVLLPMADIVLDFHSGGKTLDFLPFCAAHILPNKQQEQKAFDFVTAFAAPYSMTMLEIDAVGMYDT AAEEMGKIFITTELGGGGTATAKSAAIAKRGVINVLRHARIVAGAVDSGPTTWLDMPDGRCFSFAEEGGLIEAVIDLGDV VTEGAVIARIYPTGRTGEAPREIRAAMDGILCARHFPGLVKPGDCVAVIATVTR
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31169; Mature: 31169
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPITVVRNGKGPTALLTGGNHGDEYEGPIALFDLARALQAEEVSGAVIIVPAMNYPAFL CCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEE AGTRTSPIDRGNMNRSFPGRPDGTVTEKIADYFQRVLLPMADIVLDFHSGGKTLDFLPFC ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHH AAHILPNKQQEQKAFDFVTAFAAPYSMTMLEIDAVGMYDTAAEEMGKIFITTELGGGGTA HHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHCCEEEEEEECCCCCCC TAKSAAIAKRGVINVLRHARIVAGAVDSGPTTWLDMPDGRCFSFAEEGGLIEAVIDLGDV HHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCEEEEHHCCCEEEEHHHHHHH VTEGAVIARIYPTGRTGEAPREIRAAMDGILCARHFPGLVKPGDCVAVIATVTR HHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MIPITVVRNGKGPTALLTGGNHGDEYEGPIALFDLARALQAEEVSGAVIIVPAMNYPAFL CCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEE AGTRTSPIDRGNMNRSFPGRPDGTVTEKIADYFQRVLLPMADIVLDFHSGGKTLDFLPFC ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHH AAHILPNKQQEQKAFDFVTAFAAPYSMTMLEIDAVGMYDTAAEEMGKIFITTELGGGGTA HHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHCCEEEEEEECCCCCCC TAKSAAIAKRGVINVLRHARIVAGAVDSGPTTWLDMPDGRCFSFAEEGGLIEAVIDLGDV HHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCEEEEHHCCCEEEEHHHHHHH VTEGAVIARIYPTGRTGEAPREIRAAMDGILCARHFPGLVKPGDCVAVIATVTR HHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA