Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360905
Identifier: 86360905
GI number: 86360905
Start: 184377
End: 184736
Strand: Reverse
Name: 86360905
Synonym: RHE_PF00174
Alternate gene names: NA
Gene position: 184736-184377 (Counterclockwise)
Preceding gene: 86360910
Following gene: 86360900
Centisome position: 28.75
GC content: 57.78
Gene sequence:
>360_bases TTGCCGGCAGACTTCGACAGCCGCCTTCACTCTCCTATGGCAAAGTCAGAAATGCCGCAACGGACCAGCGCCATGCAAGA TCGACCTACACCCTACGTCCTGCCAACCTGGTCACGATCGTGCCGCCATAGGGAAGATATTTCGCGCCTTCTGTCAATGC GTTACCGGATGCGGCTCGGGCGAGAGCACCGCCCCGTGGCTCCAGTCGATCAGTCGGTCGATCCGCGCAATCTTGTGGAA AACCTCGAAGACGTCGAATGCCGCACCCTTTTCGATATGGCCTGCCAGCAACTCGCAAAGCTCGAATATTTCAGGCGGCG TGGTGGTCATTTCGACGCCGTCATCGGTGAAAACACCTGA
Upstream 100 bases:
>100_bases CGCAGCACGCGGACGAGCATGGCCTGCAAGGTCTCTTCGGAGAAGGGTAGCTTTGCGCGCGGCTTCGACATCAAGAACAC ACTCGGTCTCTGAAAGACCA
Downstream 100 bases:
>100_bases TCGCGGCCACGCCCGCGCCTGCTGCTCATCGAGCTTGCAACCGACGAATGGGATCGTATCGATGATGCCGGAGGCAAGCG CGAAGGCTGCTTCCGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPADFDSRLHSPMAKSEMPQRTSAMQDRPTPYVLPTWSRSCRHREDISRLLSMRYRMRLGREHRPVAPVDQSVDPRNLVE NLEDVECRTLFDMACQQLAKLEYFRRRGGHFDAVIGENT
Sequences:
>Translated_119_residues MPADFDSRLHSPMAKSEMPQRTSAMQDRPTPYVLPTWSRSCRHREDISRLLSMRYRMRLGREHRPVAPVDQSVDPRNLVE NLEDVECRTLFDMACQQLAKLEYFRRRGGHFDAVIGENT >Mature_118_residues PADFDSRLHSPMAKSEMPQRTSAMQDRPTPYVLPTWSRSCRHREDISRLLSMRYRMRLGREHRPVAPVDQSVDPRNLVEN LEDVECRTLFDMACQQLAKLEYFRRRGGHFDAVIGENT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13963; Mature: 13832
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADFDSRLHSPMAKSEMPQRTSAMQDRPTPYVLPTWSRSCRHREDISRLLSMRYRMRLG CCCCHHHHHCCCHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC REHRPVAPVDQSVDPRNLVENLEDVECRTLFDMACQQLAKLEYFRRRGGHFDAVIGENT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PADFDSRLHSPMAKSEMPQRTSAMQDRPTPYVLPTWSRSCRHREDISRLLSMRYRMRLG CCCHHHHHCCCHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC REHRPVAPVDQSVDPRNLVENLEDVECRTLFDMACQQLAKLEYFRRRGGHFDAVIGENT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA