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The map label for this gene is yecS [H]

Identifier: 86360891

GI number: 86360891

Start: 169414

End: 170073

Strand: Reverse

Name: yecS [H]

Synonym: RHE_PF00160

Alternate gene names: 86360891

Gene position: 170073-169414 (Counterclockwise)

Preceding gene: 86360892

Following gene: 86360890

Centisome position: 26.47

GC content: 59.24

Gene sequence:

>660_bases
ATGATCACGTTCACGCTTTGGGACATCCTACGCAACCTGCTGCTCGCCACCCGCTGGACTGTCCTTCTTTCGCTGGTCTC
GTTCGTCGGTGGCGGCATGGTTGGCTTGTGTCTGCTATTCCTGCGCATCAGCAGGCGCAAGCCCCCCAGGGTACTTGCAA
AATATTACATCGAGCTCTTCCAGGGCACGCCGCTGCTGATGCAGCTCTTCATCGCCTTTTTCGGTCTCGGCCTTTTCGGA
ATAGACGTGCCGGCTTGGCTTGCCGCGGGATTGGCGCTGATCCTGTGGAGCGCCGCCTTTCTCACCGAGATCTGGCGAGG
CTGCGTCGAAGCGGTTGCGAAGGGGCAATGGGAAGCTTCCGCCAGCCTCGGCATGGGGCGTCTGCAGCAGATGCGTTACG
TCATCCTTCCGCAGGCGCTGAGGATTGCCATACCGCCGACCGTCGGTTTCTCCGTTCAGATCATCAAGGGCACGGCGCTG
ACCTCGATCATCGGCTTCGTCGAATTGTCGAAGGCCGGCACCGTGGTCACCAACGCCACCTTCCAGCCCTTCACCGTCTA
TGGGCTCGTGGCGCTCATCTATTTCGCCCTTTGCTGGCCCTTGTCGAAAAGCAGCCAGATCCTGGAGAGAAAACTCAATG
TCGCTCATCGAAATCACTGA

Upstream 100 bases:

>100_bases
CCTATATCGTCTCGACATCAATCTATCTCGCGCTGGCGATCCTGCTGCGGCAGGTGCTGGGCCTGATCGGCTGGTTCATC
TTCCCCAGGAGGGCAGTGCG

Downstream 100 bases:

>100_bases
CGTCCGCAAGAGCTACGGATCCAACGAAGTACTGAAAGGCATCAACCTGAATGTCGAGCCTGGCGAGGTCATTGCCATTA
TCGGCAAGAGCGGTTCGGGC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MITFTLWDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFLRISRRKPPRVLAKYYIELFQGTPLLMQLFIAFFGLGLFG
IDVPAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEASASLGMGRLQQMRYVILPQALRIAIPPTVGFSVQIIKGTAL
TSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH

Sequences:

>Translated_219_residues
MITFTLWDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFLRISRRKPPRVLAKYYIELFQGTPLLMQLFIAFFGLGLFG
IDVPAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEASASLGMGRLQQMRYVILPQALRIAIPPTVGFSVQIIKGTAL
TSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH
>Mature_219_residues
MITFTLWDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFLRISRRKPPRVLAKYYIELFQGTPLLMQLFIAFFGLGLFG
IDVPAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEASASLGMGRLQQMRYVILPQALRIAIPPTVGFSVQIIKGTAL
TSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=211, Percent_Identity=37.914691943128, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=33.4928229665072, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787030, Length=211, Percent_Identity=30.8056872037915, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788645, Length=197, Percent_Identity=31.4720812182741, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1787086, Length=196, Percent_Identity=31.6326530612245, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI48994930, Length=137, Percent_Identity=34.3065693430657, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788646, Length=220, Percent_Identity=27.7272727272727, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786874, Length=209, Percent_Identity=25.3588516746411, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786873, Length=200, Percent_Identity=24, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24259; Mature: 24259

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFTLWDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFLRISRRKPPRVLAKYYIELF
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEAS
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ASLGMGRLQQMRYVILPQALRIAIPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNAT
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEECCC
FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITFTLWDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFLRISRRKPPRVLAKYYIELF
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEAS
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ASLGMGRLQQMRYVILPQALRIAIPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNAT
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEECCC
FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]