Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360853
Identifier: 86360853
GI number: 86360853
Start: 126812
End: 127231
Strand: Reverse
Name: 86360853
Synonym: RHE_PF00120
Alternate gene names: NA
Gene position: 127231-126812 (Counterclockwise)
Preceding gene: 86360856
Following gene: 86360852
Centisome position: 19.8
GC content: 54.52
Gene sequence:
>420_bases ATGCGTACTCCGGCTATTCTGCTTCTGGAAGACGAAGCGCTGATTGCGATGGATGTCGAGAGAACGCTTGACGATGCTCA GGCAGGAACTTCGACTAGTCTTGCATCCTGCGCTGCCGCGCTTGCATGGCTGGCAGATTATACTCCCGATGCGGCGATCA TTGACATTTTCCTGCGAGATGGCGAGTGCATTGAGGTTGCTGAGATACTCGTAGCACGGGGTGTTCCATTTGTCGTCCAC AGTGCTCGAAGAGGCGTGGAGAGGGAAAGTCATCAGGTTTTCCTCAACGGCACCTGGGTGCCTAAACCTTCAGACCCTGC TCGCTTGGTCAAGGCTGTGAATGATTGCCTCAGCTCGAAAAGCCGGCATCTACCTCCGATACTTTCCGATGGAAACGAAA AAGGACACCGGCGGGCGTGA
Upstream 100 bases:
>100_bases TGCAGATCCCTTCTCTGATGGTCCGTTTCCTGACGGATCAGGACGTACCCTGGGATGGGGTGTATAACTATCGTAACTTC CTCCACAACAGGTGCCGCCA
Downstream 100 bases:
>100_bases CATTTGCAACGGCCGAGATCATGATCTTTTTTCCAGCCGCTCAGGACGTCGCCTCACCATTCATCCGCGCGTCGAAACTA ACCTTCGTAACGAAGGCTGA
Product: putative two-component response regulator protein
Products: NA
Alternate protein names: Response Regulator Receiver And SARP Domain Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRDGECIEVAEILVARGVPFVVH SARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSKSRHLPPILSDGNEKGHRRA
Sequences:
>Translated_139_residues MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRDGECIEVAEILVARGVPFVVH SARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSKSRHLPPILSDGNEKGHRRA >Mature_139_residues MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRDGECIEVAEILVARGVPFVVH SARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSKSRHLPPILSDGNEKGHRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15070; Mature: 15070
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRD CCCCEEEEEECCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC GECIEVAEILVARGVPFVVHSARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSK CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHCC SRHLPPILSDGNEKGHRRA CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRD CCCCEEEEEECCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC GECIEVAEILVARGVPFVVHSARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSK CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHCC SRHLPPILSDGNEKGHRRA CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA