Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360791
Identifier: 86360791
GI number: 86360791
Start: 58732
End: 59226
Strand: Reverse
Name: 86360791
Synonym: RHE_PF00057
Alternate gene names: NA
Gene position: 59226-58732 (Counterclockwise)
Preceding gene: 86360792
Following gene: 86360790
Centisome position: 9.22
GC content: 58.99
Gene sequence:
>495_bases ATGAGCGTCCTGACGGCGATCGCCTGTCGAACGATGTCATCGTCAACGCCGTCTTTGTCGACCCCACCGGCAAGTCCTGC ACGACGCCTTTCGTCGATTCCGCTCAAAGCGGGAACCAAGGGAGGGTTCGTGAGTTGCGTGCGTGGAGAGCCGGATAACC AGCCGGTTTTCCCATCTGATTCGATCAGGCTGCCTCCAAACCTCACACTTCCCGGAGGGCGAGCATTGACAGAAGCAACG ACACCGACCAAGGAAAACCGGTTGTTCGCCCTCTTGCCTGAGGGAGAGCTTGCAACTGTCGTTTCTCATCTCGAACCGTG CGACACCCCTCGCGGCTTTGTCATGGCCAACGCCGGCGCAACGATCGACTACGCTTATTTCCCGTGCTCGGGAGTAGGTT CGATCATCAACATTTCCCCCGAGGGCAATCGCGTCGAAGCCGGGTTGTTCGGTCGTGACGGGTTTCGCCTACGGCAGGGC GGAGGAGGAATATGA
Upstream 100 bases:
>100_bases GGAATGGATCAACGACAATCTCGCCGCTCTGACGAAGAAGTTCCTCTCGCTGCGCGAGGCAGGTGAGACGGCAAAGGTTT GAGAACAATAGGCGGACGGA
Downstream 100 bases:
>100_bases GCGGCTGATTGGACCTCTGAGAAAATCGAAGCGATGGGCTCTTTCGGGCCGATCGTCTGCTCAGGGATAACAGCGGCAGC TATATCCCCGCATACCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSVLTAIACRTMSSSTPSLSTPPASPARRLSSIPLKAGTKGGFVSCVRGEPDNQPVFPSDSIRLPPNLTLPGGRALTEAT TPTKENRLFALLPEGELATVVSHLEPCDTPRGFVMANAGATIDYAYFPCSGVGSIINISPEGNRVEAGLFGRDGFRLRQG GGGI
Sequences:
>Translated_164_residues MSVLTAIACRTMSSSTPSLSTPPASPARRLSSIPLKAGTKGGFVSCVRGEPDNQPVFPSDSIRLPPNLTLPGGRALTEAT TPTKENRLFALLPEGELATVVSHLEPCDTPRGFVMANAGATIDYAYFPCSGVGSIINISPEGNRVEAGLFGRDGFRLRQG GGGI >Mature_163_residues SVLTAIACRTMSSSTPSLSTPPASPARRLSSIPLKAGTKGGFVSCVRGEPDNQPVFPSDSIRLPPNLTLPGGRALTEATT PTKENRLFALLPEGELATVVSHLEPCDTPRGFVMANAGATIDYAYFPCSGVGSIINISPEGNRVEAGLFGRDGFRLRQGG GGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17059; Mature: 16927
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLTAIACRTMSSSTPSLSTPPASPARRLSSIPLKAGTKGGFVSCVRGEPDNQPVFPSD CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC SIRLPPNLTLPGGRALTEATTPTKENRLFALLPEGELATVVSHLEPCDTPRGFVMANAGA CEECCCCCCCCCCCEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEEECCCC TIDYAYFPCSGVGSIINISPEGNRVEAGLFGRDGFRLRQGGGGI EEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCEEEECCCCCC >Mature Secondary Structure SVLTAIACRTMSSSTPSLSTPPASPARRLSSIPLKAGTKGGFVSCVRGEPDNQPVFPSD CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC SIRLPPNLTLPGGRALTEATTPTKENRLFALLPEGELATVVSHLEPCDTPRGFVMANAGA CEECCCCCCCCCCCEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEEECCCC TIDYAYFPCSGVGSIINISPEGNRVEAGLFGRDGFRLRQGGGGI EEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA