Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360760
Identifier: 86360760
GI number: 86360760
Start: 26176
End: 27210
Strand: Reverse
Name: 86360760
Synonym: RHE_PF00026
Alternate gene names: NA
Gene position: 27210-26176 (Counterclockwise)
Preceding gene: 86360763
Following gene: 86360759
Centisome position: 4.23
GC content: 63.29
Gene sequence:
>1035_bases ATGTTCGGACTGCGCTTCATCAAGACGGAACCCACGCAATACGTCATCCAATATCAGAACGGCAAGGCGGTCCGTGAGGG CGCCGGCCTTGCTTTCTGGCATTTTTCGCCTTCGAGCTCTCTCGTGCTCGTGCCGACGGCCAGCGTCAACGATCCTTTCA TCTTTCCTCTGGTGACATCAGACTTCCAGGAAGTGACGGTGCAGGGCCAAATCACCTACCGCATCGCCGAGCCGCGCCGC ACGGCGGCACTTTTGAATTTCACGCTCGACCGCAAGGGCCATTATGTCTCGGAGGACCCGCAGAAGCTTTCGACCCGCGT GATCGATCGCGTTCAGGTGGCGATGCGCGCCGAGGTGCAGACGCTGTCGCTCAAGGAGGTTCTTGCTTCGGGCGAGGCGC TCGTCGCCGGCGTGGCCGATGCGCTCAAGGTGCATCCGACCATCGAGGCGCTCGGCTTAGAGATTCTCGGCCTGTCGCTG CTTGCCGTCATGCCGAAGGCCGAGACGGCCAAGGCGCTGGAAGCACATGCCCGTGAAGCCCTGCTGCGGCAGGCCGACGA AGCCATCTATAGCAGGCGCAACGCCGCGATCGAGCAGGAGCGGACGATCAAGGAAAACGAGATCGCCACCGAGATCACGC TGGAGAACAAGAGACGGCAGGTGCGCGAAGCCCAGATGGAGGCCGAACGCGCCGTGCAGGAACGGCAGCTGCAGATCCGC CGGGACGAAATGGCCGGCAAGATCGCGCTCGAAGAGCAGAACCGTGACCTGGTGACGCTGGCGGCGACCAATGCGCGGGC CGAGGCCGACGCCCAGGCCTATGCGCTGACGGCGATGATGAAATCCTTCGAACAGGCCGATCCGAAAGTGTTGCAGGCGC TCGCCTCGGTCGGCATGCAGCCGGGCCAGCTGATGGCGCTCGCCTTCCGCGACCTTGCAGACAATGCGACGAAGATCGGC CAGCTGAACGTCTCGCCCGATCTTCTCAGGGAGATCTTGCAGCCGCAGGAGGGCAAGGACCGTGCCGGTCTCTGA
Upstream 100 bases:
>100_bases GTGTAAATCTTCAACTAAGTTAGTTGACATTTCTCACTAAGTCGTGTTTTCTCTTCTTCGACACGAGCGAGGGGCTCGAG CCAAGAACAGGAAAACGGAT
Downstream 100 bases:
>100_bases CGAACGCAAGATCATCCTGGTCGTCAGGCCGACCCGGCTCGACGAACTCATCGCCCGGTTCAACACCGTGCAGCAGGCGC AGTTCTATGTCGAGCATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: SPFH Domain-Containing Protein/Band 7 Family Protein
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFGLRFIKTEPTQYVIQYQNGKAVREGAGLAFWHFSPSSSLVLVPTASVNDPFIFPLVTSDFQEVTVQGQITYRIAEPRR TAALLNFTLDRKGHYVSEDPQKLSTRVIDRVQVAMRAEVQTLSLKEVLASGEALVAGVADALKVHPTIEALGLEILGLSL LAVMPKAETAKALEAHAREALLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR RDEMAGKIALEEQNRDLVTLAATNARAEADAQAYALTAMMKSFEQADPKVLQALASVGMQPGQLMALAFRDLADNATKIG QLNVSPDLLREILQPQEGKDRAGL
Sequences:
>Translated_344_residues MFGLRFIKTEPTQYVIQYQNGKAVREGAGLAFWHFSPSSSLVLVPTASVNDPFIFPLVTSDFQEVTVQGQITYRIAEPRR TAALLNFTLDRKGHYVSEDPQKLSTRVIDRVQVAMRAEVQTLSLKEVLASGEALVAGVADALKVHPTIEALGLEILGLSL LAVMPKAETAKALEAHAREALLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR RDEMAGKIALEEQNRDLVTLAATNARAEADAQAYALTAMMKSFEQADPKVLQALASVGMQPGQLMALAFRDLADNATKIG QLNVSPDLLREILQPQEGKDRAGL >Mature_344_residues MFGLRFIKTEPTQYVIQYQNGKAVREGAGLAFWHFSPSSSLVLVPTASVNDPFIFPLVTSDFQEVTVQGQITYRIAEPRR TAALLNFTLDRKGHYVSEDPQKLSTRVIDRVQVAMRAEVQTLSLKEVLASGEALVAGVADALKVHPTIEALGLEILGLSL LAVMPKAETAKALEAHAREALLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR RDEMAGKIALEEQNRDLVTLAATNARAEADAQAYALTAMMKSFEQADPKVLQALASVGMQPGQLMALAFRDLADNATKIG QLNVSPDLLREILQPQEGKDRAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38043; Mature: 38043
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLRFIKTEPTQYVIQYQNGKAVREGAGLAFWHFSPSSSLVLVPTASVNDPFIFPLVTS CCCCEEEECCCCEEEEEECCCCEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECC DFQEVTVQGQITYRIAEPRRTAALLNFTLDRKGHYVSEDPQKLSTRVIDRVQVAMRAEVQ CCHHEEEEEEEEEEECCCCHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TLSLKEVLASGEALVAGVADALKVHPTIEALGLEILGLSLLAVMPKAETAKALEAHAREA HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR HHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH RDEMAGKIALEEQNRDLVTLAATNARAEADAQAYALTAMMKSFEQADPKVLQALASVGMQ HHHHCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC PGQLMALAFRDLADNATKIGQLNVSPDLLREILQPQEGKDRAGL CCHHHHHHHHHHHCCCHHCEEECCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFGLRFIKTEPTQYVIQYQNGKAVREGAGLAFWHFSPSSSLVLVPTASVNDPFIFPLVTS CCCCEEEECCCCEEEEEECCCCEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECC DFQEVTVQGQITYRIAEPRRTAALLNFTLDRKGHYVSEDPQKLSTRVIDRVQVAMRAEVQ CCHHEEEEEEEEEEECCCCHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TLSLKEVLASGEALVAGVADALKVHPTIEALGLEILGLSLLAVMPKAETAKALEAHAREA HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR HHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH RDEMAGKIALEEQNRDLVTLAATNARAEADAQAYALTAMMKSFEQADPKVLQALASVGMQ HHHHCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC PGQLMALAFRDLADNATKIGQLNVSPDLLREILQPQEGKDRAGL CCHHHHHHHHHHHCCCHHCEEECCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA