Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360756
Identifier: 86360756
GI number: 86360756
Start: 22159
End: 22494
Strand: Reverse
Name: 86360756
Synonym: RHE_PF00022
Alternate gene names: NA
Gene position: 22494-22159 (Counterclockwise)
Preceding gene: 86360759
Following gene: 86360755
Centisome position: 3.5
GC content: 52.38
Gene sequence:
>336_bases ATGGATTGCTTTGAACAGCTCCGCGGTTGGGTCATGCCGTTCATCCTCGGGACCGAACCAAAATCGAAACCATTTGGAGA GATCCTCATATGGCAGTTGCTCGAGGTTATGCCTGATCGATGCTCCCTTCCGTCGCAGGTGTTCGATCATGAGAGACGAG TTTCCGACTATTGCTATGACGGCATCAAACGACATGGTGTGCTCTGGCTGCAATTCCAGGATATCCAACTCGCGATCGCT CGTGATGAAGTCCACACAATAGAGCCGGTCGAAGAGCACGCTCTATTCGCTCAATTGCAACTTCATTTCGGCTGGCCCTT TCGGCGCAGTCGCTAG
Upstream 100 bases:
>100_bases TTACTCGCTTCGGCTCTCGACCTGCTGACCTCAAGCCGCATTGCTCCGGCTTATTCGAGTGCCTGCAGAACTCAGAAGGT GTCGGGAGGAGCGGCGGCGA
Downstream 100 bases:
>100_bases CTGCCTCTGAGCCAAACTTCGAAACTGAGCGACTTCGTAATTGCCTATGCAGAAGACGAGGGCGGCGGGACCGAGCATTG AAAGTGCCGCCATGTCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MDCFEQLRGWVMPFILGTEPKSKPFGEILIWQLLEVMPDRCSLPSQVFDHERRVSDYCYDGIKRHGVLWLQFQDIQLAIA RDEVHTIEPVEEHALFAQLQLHFGWPFRRSR
Sequences:
>Translated_111_residues MDCFEQLRGWVMPFILGTEPKSKPFGEILIWQLLEVMPDRCSLPSQVFDHERRVSDYCYDGIKRHGVLWLQFQDIQLAIA RDEVHTIEPVEEHALFAQLQLHFGWPFRRSR >Mature_111_residues MDCFEQLRGWVMPFILGTEPKSKPFGEILIWQLLEVMPDRCSLPSQVFDHERRVSDYCYDGIKRHGVLWLQFQDIQLAIA RDEVHTIEPVEEHALFAQLQLHFGWPFRRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13226; Mature: 13226
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCFEQLRGWVMPFILGTEPKSKPFGEILIWQLLEVMPDRCSLPSQVFDHERRVSDYCYD CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GIKRHGVLWLQFQDIQLAIARDEVHTIEPVEEHALFAQLQLHFGWPFRRSR HHHHCCEEEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDCFEQLRGWVMPFILGTEPKSKPFGEILIWQLLEVMPDRCSLPSQVFDHERRVSDYCYD CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GIKRHGVLWLQFQDIQLAIARDEVHTIEPVEEHALFAQLQLHFGWPFRRSR HHHHCCEEEEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA