| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is adk [H]
Identifier: 85859317
GI number: 85859317
Start: 1506838
End: 1507563
Strand: Direct
Name: adk [H]
Synonym: SYN_02538
Alternate gene names: 85859317
Gene position: 1506838-1507563 (Clockwise)
Preceding gene: 85859309
Following gene: 85859318
Centisome position: 47.4
GC content: 52.07
Gene sequence:
>726_bases TTGACCCGGTGCCGGATTTTGCCTATAGTCCCAAAACTGCAAACGAAATTGAAAGTTAAGGAGGTTATCAGGAATATGAA GATTATTCTTTTGGGAGCGCCGGGCGCCGGGAAGGGCACAGTGGCCAAACTGCTGACGGAGTATGATGGTTCCGTACAGA TTTCCACGGGAGACATTCTGCGGGCGGCCGTCAAGGAAGGAACAGAGCTTGGACGGGAGGCCAAAGGCTACATGGATCGG GGTGATCTGGTTCCCGATGCGCTGATCATGCGGATGATGGAAACCCGCCTTCAACAGCCGGATTGTGCAAACGGATTCAT CCTGGACGGTTTTCCCAGAACGATTCCCCAGGCCGAGGCCTTGAAGAAGCTCCTGGAAAAACTGAATATTCGACTGAATT TTGTCGTCAATCTGGAAGTTCCGCGGGATGTGATCCTGGATCGGCTGACCACTCGGAGAACCTGCTCCAATCCGGATTGT CAGGAAATATACAATATCAAAAGCAATCCTCCCCTGCCCGATGGCCGCTGCAAGAAATGCGGCAGTCCGACGATTCAGCG GGATGATGAGACCGAAGAAGCCATTCTGAACCGTCTGGAAACCTACAATGAGAAAACCGCGCCTCTGATTGGCTTTTATG AAAGGGAAGGGCTGCTCAAGACATTTTCCTCAGTCAGCAGCGCCGAAACCGTGGAAGCCGTTAAAAAGGCCTTGAAGGAA TGCTGA
Upstream 100 bases:
>100_bases TGGGAAGTAAGCCTCTTCCCTGAGGCTGGCGGCGTTCCGTGACTATAAAAAAGTATTATGGATTTAGTCAAGAATTAATG CCTTTCCGCCCTGTATTCGC
Downstream 100 bases:
>100_bases TCAAAATACCGGGTCTGTTTCGCCATGATCGATTATGAGAAGGAACTGAACGAAGAGCAGTGTCACGTTGTGCTGGAAGC GGGAGGGCCCATGCTGGTTC
Product: adenylate kinase / nucleoside-diphosphate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTRCRILPIVPKLQTKLKVKEVIRNMKIILLGAPGAGKGTVAKLLTEYDGSVQISTGDILRAAVKEGTELGREAKGYMDR GDLVPDALIMRMMETRLQQPDCANGFILDGFPRTIPQAEALKKLLEKLNIRLNFVVNLEVPRDVILDRLTTRRTCSNPDC QEIYNIKSNPPLPDGRCKKCGSPTIQRDDETEEAILNRLETYNEKTAPLIGFYEREGLLKTFSSVSSAETVEAVKKALKE C
Sequences:
>Translated_241_residues MTRCRILPIVPKLQTKLKVKEVIRNMKIILLGAPGAGKGTVAKLLTEYDGSVQISTGDILRAAVKEGTELGREAKGYMDR GDLVPDALIMRMMETRLQQPDCANGFILDGFPRTIPQAEALKKLLEKLNIRLNFVVNLEVPRDVILDRLTTRRTCSNPDC QEIYNIKSNPPLPDGRCKKCGSPTIQRDDETEEAILNRLETYNEKTAPLIGFYEREGLLKTFSSVSSAETVEAVKKALKE C >Mature_240_residues TRCRILPIVPKLQTKLKVKEVIRNMKIILLGAPGAGKGTVAKLLTEYDGSVQISTGDILRAAVKEGTELGREAKGYMDRG DLVPDALIMRMMETRLQQPDCANGFILDGFPRTIPQAEALKKLLEKLNIRLNFVVNLEVPRDVILDRLTTRRTCSNPDCQ EIYNIKSNPPLPDGRCKKCGSPTIQRDDETEEAILNRLETYNEKTAPLIGFYEREGLLKTFSSVSSAETVEAVKKALKEC
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=214, Percent_Identity=38.785046728972, Blast_Score=157, Evalue=6e-39, Organism=Homo sapiens, GI4502013, Length=214, Percent_Identity=38.785046728972, Blast_Score=157, Evalue=6e-39, Organism=Homo sapiens, GI19923437, Length=216, Percent_Identity=37.5, Blast_Score=155, Evalue=4e-38, Organism=Homo sapiens, GI310110345, Length=202, Percent_Identity=36.1386138613861, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI53832003, Length=202, Percent_Identity=36.1386138613861, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI8051579, Length=202, Percent_Identity=36.1386138613861, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI53832001, Length=202, Percent_Identity=36.1386138613861, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI4502011, Length=215, Percent_Identity=28.3720930232558, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI22749187, Length=188, Percent_Identity=31.3829787234043, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI28144899, Length=213, Percent_Identity=27.2300469483568, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI28144897, Length=213, Percent_Identity=27.2300469483568, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI7706497, Length=245, Percent_Identity=25.7142857142857, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1786680, Length=191, Percent_Identity=48.6910994764398, Blast_Score=187, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17552384, Length=231, Percent_Identity=34.6320346320346, Blast_Score=150, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17537943, Length=216, Percent_Identity=30.0925925925926, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17550688, Length=198, Percent_Identity=29.2929292929293, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17533833, Length=207, Percent_Identity=27.536231884058, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17567503, Length=210, Percent_Identity=25.7142857142857, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320432, Length=210, Percent_Identity=38.0952380952381, Blast_Score=152, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6321018, Length=202, Percent_Identity=40.0990099009901, Blast_Score=138, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6322828, Length=190, Percent_Identity=27.3684210526316, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI17737899, Length=206, Percent_Identity=40.2912621359223, Blast_Score=154, Evalue=6e-38, Organism=Drosophila melanogaster, GI24645822, Length=206, Percent_Identity=40.2912621359223, Blast_Score=154, Evalue=6e-38, Organism=Drosophila melanogaster, GI22026816, Length=190, Percent_Identity=41.5789473684211, Blast_Score=145, Evalue=2e-35, Organism=Drosophila melanogaster, GI24663208, Length=188, Percent_Identity=26.063829787234, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17647141, Length=188, Percent_Identity=26.063829787234, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI221459597, Length=205, Percent_Identity=25.8536585365854, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI21356893, Length=205, Percent_Identity=25.8536585365854, Blast_Score=74, Evalue=7e-14,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 26892; Mature: 26761
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRCRILPIVPKLQTKLKVKEVIRNMKIILLGAPGAGKGTVAKLLTEYDGSVQISTGDIL CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEHHHHH RAAVKEGTELGREAKGYMDRGDLVPDALIMRMMETRLQQPDCANGFILDGFPRTIPQAEA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHH LKKLLEKLNIRLNFVVNLEVPRDVILDRLTTRRTCSNPDCQEIYNIKSNPPLPDGRCKKC HHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHC GSPTIQRDDETEEAILNRLETYNEKTAPLIGFYEREGLLKTFSSVSSAETVEAVKKALKE CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC C C >Mature Secondary Structure TRCRILPIVPKLQTKLKVKEVIRNMKIILLGAPGAGKGTVAKLLTEYDGSVQISTGDIL CCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEHHHHH RAAVKEGTELGREAKGYMDRGDLVPDALIMRMMETRLQQPDCANGFILDGFPRTIPQAEA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHH LKKLLEKLNIRLNFVVNLEVPRDVILDRLTTRRTCSNPDCQEIYNIKSNPPLPDGRCKKC HHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHC GSPTIQRDDETEEAILNRLETYNEKTAPLIGFYEREGLLKTFSSVSSAETVEAVKKALKE CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC C C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA