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The map label for this gene is ygfS [C]

Identifier: 85859263

GI number: 85859263

Start: 1449982

End: 1450578

Strand: Direct

Name: ygfS [C]

Synonym: SYN_03219

Alternate gene names: 85859263

Gene position: 1449982-1450578 (Clockwise)

Preceding gene: 85859262

Following gene: 85859266

Centisome position: 45.61

GC content: 53.27

Gene sequence:

>597_bases
TTGCTGAAGACTTTGAGAAGAGAGGTATTTTCTAAAATGGCCAAGATAAAGAAAAAAATAAAGACGATCAAGATTGACGA
GTCGAAATGCAATGGCTGCCGGGCATGCGAGATGATCTGCTCCGCCTTCCATTCCACTCCGAAGTACAGCACCATCAATC
CGGAGAGGTCGCGCATCCGGATGTATCGCGACGTGAGAAACGACCTGTATCTTCCCGTTTATGCCGGCGAGTATACAGCC
GCCGAGTGCATGGGCAGAGACGTCTATGTCATTGACGGCAGGGAGTACGAAGAGTGCGCCTTCTGCCGGGCGGCCTGCCC
GTCCCGGGACATTTTCCATGAACCCGATTCCGGCCTTCCGCTCAAATGCGATATGTGTGAAGACGACCCTCCCCAGGAAG
TTCCCCTCTGTGTCAAGTGGTGCCTTAATGACGCCCTGATTTACGAGGAGCGGGAAGAGGAAGTCGAGGAAGGGATTGAG
ATGGAGGACGTGGAGACCGGATTGTTAGCCATGGTGGACAAATACGGCCTGCAGAAGGTCCTGGATACTGCCGCCCGGGT
AGCCAAAAAGGGCGAATCCGTCGAATCGAAAAAATAA

Upstream 100 bases:

>100_bases
TACGAAAAGCAGCTTCTGGAAGGCTACCAGGCATACAAGGGCTGGGATACGGAAGGCATTCCGACAAAAGAGTCTCTGGA
GTCACTGGATCTGGGTTTCG

Downstream 100 bases:

>100_bases
AAAAGGAAAAGCGCAATAAAGGGCTTGGTCAAATTAAGGCTAAGCCCTTTATTGCCACATAAAATATTTAATCTATTCTT
TTGTCTTTTTTAGCTTCGCA

Product: 4Fe-4S protein

Products: NA

Alternate protein names: Ferredoxin

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLKTLRREVFSKMAKIKKKIKTIKIDESKCNGCRACEMICSAFHSTPKYSTINPERSRIRMYRDVRNDLYLPVYAGEYTA
AECMGRDVYVIDGREYEECAFCRAACPSRDIFHEPDSGLPLKCDMCEDDPPQEVPLCVKWCLNDALIYEEREEEVEEGIE
MEDVETGLLAMVDKYGLQKVLDTAARVAKKGESVESKK

Sequences:

>Translated_198_residues
MLKTLRREVFSKMAKIKKKIKTIKIDESKCNGCRACEMICSAFHSTPKYSTINPERSRIRMYRDVRNDLYLPVYAGEYTA
AECMGRDVYVIDGREYEECAFCRAACPSRDIFHEPDSGLPLKCDMCEDDPPQEVPLCVKWCLNDALIYEEREEEVEEGIE
MEDVETGLLAMVDKYGLQKVLDTAARVAKKGESVESKK
>Mature_198_residues
MLKTLRREVFSKMAKIKKKIKTIKIDESKCNGCRACEMICSAFHSTPKYSTINPERSRIRMYRDVRNDLYLPVYAGEYTA
AECMGRDVYVIDGREYEECAFCRAACPSRDIFHEPDSGLPLKCDMCEDDPPQEVPLCVKWCLNDALIYEEREEEVEEGIE
MEDVETGLLAMVDKYGLQKVLDTAARVAKKGESVESKK

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22705; Mature: 22705

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00697 DNA_LIGASE_A1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTLRREVFSKMAKIKKKIKTIKIDESKCNGCRACEMICSAFHSTPKYSTINPERSRIR
CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
MYRDVRNDLYLPVYAGEYTAAECMGRDVYVIDGREYEECAFCRAACPSRDIFHEPDSGLP
HHHHHHHCEEEEEECCCHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCC
LKCDMCEDDPPQEVPLCVKWCLNDALIYEEREEEVEEGIEMEDVETGLLAMVDKYGLQKV
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LDTAARVAKKGESVESKK
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLKTLRREVFSKMAKIKKKIKTIKIDESKCNGCRACEMICSAFHSTPKYSTINPERSRIR
CHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
MYRDVRNDLYLPVYAGEYTAAECMGRDVYVIDGREYEECAFCRAACPSRDIFHEPDSGLP
HHHHHHHCEEEEEECCCHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCC
LKCDMCEDDPPQEVPLCVKWCLNDALIYEEREEEVEEGIEMEDVETGLLAMVDKYGLQKV
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LDTAARVAKKGESVESKK
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA