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The map label for this gene is tnpA [H]

Identifier: 85859261

GI number: 85859261

Start: 1446355

End: 1447560

Strand: Direct

Name: tnpA [H]

Synonym: SYN_03218

Alternate gene names: 85859261

Gene position: 1446355-1447560 (Clockwise)

Preceding gene: 85859260

Following gene: 85859262

Centisome position: 45.49

GC content: 46.93

Gene sequence:

>1206_bases
ATGTCCACATCGGTTCTTTATCATGCTTTCAATCTGAAGGGTATTACTTATAGAGCAACACGCTTCACGGGTGACGTCAT
CGAATATTTTGCAGATGTGAAAGAAGAATACATTCGCTGTCCAAAGTGCGGGCAGCGTAAATTTACCTTTAAAGGACAGA
AAACACGGAGTTTTCATCTGGGACCTATGGGGCGTAAGAGGTGTTTCCTTGTACTTTCCCTTCATCGAATAAAATGCAAC
ACTTGCGACACCCTTTGGTGGCCCGATCTGCCTTTTATGGTGGGGAAGCATAGATTTGCCCGATCCTTTGCTCTGATTGT
TCTGGATCTGCTTCGATTCGGCACGATTCGCTGGGTTGCCGATTACCTCGGCGTGGGTTGGGATATGATCAAAGAGATTC
ATAAGTTGAAATTGCAGCGCCTCTATCGGAACATTCCTCTTCATAAAGTTCGGTATATCGGTATCGATGAATTCAGCATC
CGGAAAGGCCATGAGTACATGACCACGGTGATGGATCTCTCCGAAGGACGAATCCTTTACGCCACTGAGGGAAAGGGCAA
GGAGGGGATTTTACCCTTCCTGAAAAAACTTGCACGCAAGGGGAAAAAACTGCGAGCGGTTGCAATGGACATGGGAATTT
CCTTCTTCTCCGCCGTCCGGGAAGCCCTTCCCAATATCGATGTCGTCTTCGACCGTTACCATATTATGGCTCTGATGAAT
CAAGGCATCGAAAACTTGCGCAGAAATCATCAGAAAGAACTTGATGATACCGGGAAGCAAACCCTCAAGGGAAACCGCTT
CCTCCTTTTGCGAAATTATGATTCCCTGAAGCCGGACCATAAGGAACGTCTCGATGCCCTGATGCAGGCCAATCAGCCTC
TATTCGTCATGCATTCCATGAAAGAGCAACTCAGACTCTTCTGGGAAATACCGGAGTACGCCCAGGCTGTTACCTTCCTT
GACACCTGGTGTAAGGACGCCATGCTGTCCGGAATCAAAGAACTCGTCAAAGTAGCCAAAACGCTCTCCGGATACAGGAC
TGCGATACTCAATTATTTCAAACATCACATTACAAATGCCGCCCTTGAGGGCACAAACAACAAGATTAAAACTTTAAAAA
GGCAGGCCTATGGATTCCGGGATATGGAATACTTCAAACTCCGCCTCTATCACCTGCATACTCAGAGGTACTCATTAACC
GGATGA

Upstream 100 bases:

>100_bases
ATCCGGTTAATGAGTACCTTGGTATTGCATAAAATCACATGGACATGGCAAGAGCCCTGTTGTTTGAGACCAATCGAACA
ACAAAAGGAGGCTCCAGACC

Downstream 100 bases:

>100_bases
ACCGAAATTTATTCCAATTATTCAAATTCAACCTGCATACTGAATAGCTGCAACCACTTTTGTCCGGGGATTTGTTCCTT
CGAGTCAACAGGACTTTTGT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCFLVLSLHRIKCN
TCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSI
RKGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
QGIENLRRNHQKELDDTGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLFWEIPEYAQAVTFL
DTWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNAALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHTQRYSLT
G

Sequences:

>Translated_401_residues
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCFLVLSLHRIKCN
TCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSI
RKGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
QGIENLRRNHQKELDDTGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLFWEIPEYAQAVTFL
DTWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNAALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHTQRYSLT
G
>Mature_400_residues
STSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCFLVLSLHRIKCNT
CDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIR
KGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMNQ
GIENLRRNHQKELDDTGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLFWEIPEYAQAVTFLD
TWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNAALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHTQRYSLTG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 47057; Mature: 46926

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHL
CCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEC
GPMGRKRCFLVLSLHRIKCNTCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVA
CCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIRKGHEYMTTVMDLSEGRILY
HHHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHCCCCHHHHHHHHHCCCCEEEE
ATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
EECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
QGIENLRRNHQKELDDTGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSM
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEHHHHH
KEQLRLFWEIPEYAQAVTFLDTWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHTQRYSLTG
HHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure 
STSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHL
CCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEC
GPMGRKRCFLVLSLHRIKCNTCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVA
CCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIRKGHEYMTTVMDLSEGRILY
HHHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHCCCCHHHHHHHHHCCCCEEEE
ATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
EECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
QGIENLRRNHQKELDDTGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSM
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEHHHHH
KEQLRLFWEIPEYAQAVTFLDTWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHTQRYSLTG
HHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]