| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859220
Identifier: 85859220
GI number: 85859220
Start: 1401545
End: 1401838
Strand: Direct
Name: 85859220
Synonym: SYN_03209
Alternate gene names: NA
Gene position: 1401545-1401838 (Clockwise)
Preceding gene: 85859215
Following gene: 85859223
Centisome position: 44.08
GC content: 45.58
Gene sequence:
>294_bases TTGCAGGAAGAGCACTTTACCGCCGGATGTCCGCTCTGGCTGCCAAGCGGCACTCTTGTCCTGGCAAACAAAGTCAAACT GGTCAATACAGCCCGAAGGATCGGAATTGCACTAGTGCATGTTCGTCATGTGAGCCAGAATCCAAATGCTTCAATGTTCG CACATAACAGAAAATATTTTGAATTCGTTTGTGATGTTTCGCCCCTGGACGGGGAGTATGTCGTTACAAAATCTGGACTG GGCGCTTTTTATGACAATGATCTAGTACCACGTAACTTCTATAAATTCGGATAA
Upstream 100 bases:
>100_bases GTTATCTTTATGTGTTATTAATGACATAATTATACTTCCACATTTATGTGAGTTGGGTAATTCAATAATATGAGTCAGCA ATCATCTGCTTTGCGTCGAC
Downstream 100 bases:
>100_bases AGACGTTTCAGCTTGATCCGAGCGTCTGAGGTAGTAAATTGCCAATCAATTATTTTGGAGCTGTTGTTTCGGTCTCTTTC CCATGCATCCACTTCGGCCT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MQEEHFTAGCPLWLPSGTLVLANKVKLVNTARRIGIALVHVRHVSQNPNASMFAHNRKYFEFVCDVSPLDGEYVVTKSGL GAFYDNDLVPRNFYKFG
Sequences:
>Translated_97_residues MQEEHFTAGCPLWLPSGTLVLANKVKLVNTARRIGIALVHVRHVSQNPNASMFAHNRKYFEFVCDVSPLDGEYVVTKSGL GAFYDNDLVPRNFYKFG >Mature_97_residues MQEEHFTAGCPLWLPSGTLVLANKVKLVNTARRIGIALVHVRHVSQNPNASMFAHNRKYFEFVCDVSPLDGEYVVTKSGL GAFYDNDLVPRNFYKFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10916; Mature: 10916
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEEHFTAGCPLWLPSGTLVLANKVKLVNTARRIGIALVHVRHVSQNPNASMFAHNRKYF CCCCCCCCCCCEECCCCCEEEECCEEEHHHHHHHCEEEEEEEECCCCCCCCEEECCCEEE EFVCDVSPLDGEYVVTKSGLGAFYDNDLVPRNFYKFG EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEECCC >Mature Secondary Structure MQEEHFTAGCPLWLPSGTLVLANKVKLVNTARRIGIALVHVRHVSQNPNASMFAHNRKYF CCCCCCCCCCCEECCCCCEEEECCEEEHHHHHHHCEEEEEEEECCCCCCCCEEECCCEEE EFVCDVSPLDGEYVVTKSGLGAFYDNDLVPRNFYKFG EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA