| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858367
Identifier: 85858367
GI number: 85858367
Start: 532027
End: 532587
Strand: Direct
Name: 85858367
Synonym: SYN_02324
Alternate gene names: NA
Gene position: 532027-532587 (Clockwise)
Preceding gene: 85858366
Following gene: 85858368
Centisome position: 16.73
GC content: 63.99
Gene sequence:
>561_bases GTGCGCCGCGGAACGGCGGAAGCCCTGCGCGGCCACATCCCCCCAGCGGGTGCGCCTATGGCGGGCGTGCCGGGAATGCA GGGAGGCGCAAAAATGACCATCTCGAAGAAGGAACTGGCGATCATCCACATCGCCAAGGCCCAGTGCGGCTGGACTGACG AGGAATACCGGCACACCCTGAAGGACGGCTTCGGGGTGTCTTCGTCGAAAGAACTGACCTCGAAGCAGGCGGACAGGCTG ATCGCCCTGTTCCAGGCGGACGGCTTCCGGATCGTGAGCAGACCGAAGCGGCAACCCTCCGGCAATCCGGCGAATTGGGA CAGGCTGCCCCTGCTGAAGAAGATCGGCGCGATCCTGGCCGACATCGGCAAGACGGAAGCCTACGCCGACGGCATCTCCC GGAGGATGTTCAAGGTGGACGCCTGCCGGTGGTGCACGCCGGAACAGCTCTGGAAGATCGTCGTCGCCCTGGAATACACG CGGAACAAGCTGACCGGCGAGGGGCCGACGGAATCGATAGCCCGGAGAAGAAAGAAAGCGCTCAAAGCGCGCAACGCTTA A
Upstream 100 bases:
>100_bases CCTACGGGGCGGACATGTCCCGGATACTCCAGCGGGTCGGCGAGGTCTTCGGCTCGGAGACGGTGAACTGCCCGGTCATG GGGATTATCTCCCTGAAAAG
Downstream 100 bases:
>100_bases GGAAGGAGGCAGAAATGGACGTGATTATCGTCAAGGACGAGGGAATCGTGGGCGTATACAACAAGTTCCAGCGGCTGGAA AAGCTGATTTACGTCATGGC
Product: mu-like prophage protein gp16
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MRRGTAEALRGHIPPAGAPMAGVPGMQGGAKMTISKKELAIIHIAKAQCGWTDEEYRHTLKDGFGVSSSKELTSKQADRL IALFQADGFRIVSRPKRQPSGNPANWDRLPLLKKIGAILADIGKTEAYADGISRRMFKVDACRWCTPEQLWKIVVALEYT RNKLTGEGPTESIARRRKKALKARNA
Sequences:
>Translated_186_residues MRRGTAEALRGHIPPAGAPMAGVPGMQGGAKMTISKKELAIIHIAKAQCGWTDEEYRHTLKDGFGVSSSKELTSKQADRL IALFQADGFRIVSRPKRQPSGNPANWDRLPLLKKIGAILADIGKTEAYADGISRRMFKVDACRWCTPEQLWKIVVALEYT RNKLTGEGPTESIARRRKKALKARNA >Mature_186_residues MRRGTAEALRGHIPPAGAPMAGVPGMQGGAKMTISKKELAIIHIAKAQCGWTDEEYRHTLKDGFGVSSSKELTSKQADRL IALFQADGFRIVSRPKRQPSGNPANWDRLPLLKKIGAILADIGKTEAYADGISRRMFKVDACRWCTPEQLWKIVVALEYT RNKLTGEGPTESIARRRKKALKARNA
Specific function: Unknown
COG id: COG4382
COG function: function code S; Mu-like prophage protein gp16
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20510; Mature: 20510
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGTAEALRGHIPPAGAPMAGVPGMQGGAKMTISKKELAIIHIAKAQCGWTDEEYRHTL CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHH KDGFGVSSSKELTSKQADRLIALFQADGFRIVSRPKRQPSGNPANWDRLPLLKKIGAILA HHCCCCCCCHHHHHHHHHHEEHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DIGKTEAYADGISRRMFKVDACRWCTPEQLWKIVVALEYTRNKLTGEGPTESIARRRKKA HHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LKARNA HHHCCC >Mature Secondary Structure MRRGTAEALRGHIPPAGAPMAGVPGMQGGAKMTISKKELAIIHIAKAQCGWTDEEYRHTL CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHH KDGFGVSSSKELTSKQADRLIALFQADGFRIVSRPKRQPSGNPANWDRLPLLKKIGAILA HHCCCCCCCHHHHHHHHHHEEHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DIGKTEAYADGISRRMFKVDACRWCTPEQLWKIVVALEYTRNKLTGEGPTESIARRRKKA HHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LKARNA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA