| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is ybjG [C]
Identifier: 85858338
GI number: 85858338
Start: 505247
End: 505975
Strand: Direct
Name: ybjG [C]
Synonym: SYN_02354
Alternate gene names: 85858338
Gene position: 505247-505975 (Clockwise)
Preceding gene: 85858337
Following gene: 85858339
Centisome position: 15.89
GC content: 51.3
Gene sequence:
>729_bases TTGGCTCCCAAGGGCGAGACGGGATTTTTGATCGGAGGAATCAACTTGAATTCTCTGCGAAATAGACTGAAGACCAGAAT TCTCGTAGTCGCCGCGTCTCTTGCATTTACTTTATGGGTTTTTATAGAAGTGGCTGAAGAGGTTTGGGAAGGTGAAGCAG GAGTGTTTGATCGCTCCATTTTACTAAGTCTGCACACGTCCAGTGGCCCAGACAATGTGCTTGGGCCAATATGGCTGCAG GCAGTGGCACGTGACGTCTCAGCGCTGGGCAGCATTACAGTGCTGGGCATTATCGTAGCAGTTGTTACCCTCTTTCTTCT TCTTACCGGCAGGCGCATGATTGCGATGTTTTTACTGTTGGCCTCCACGAGCGGGGGGCTAGCAACATTCTTGCTCAAGG CGGTTTTCAACCGGCCCCGACCAGAGCTTTTTCAGCATGGAGACTATGTAATTTCGGCTAGTTTTCCCAGCGGACATGCA ATGATTGCTGCTTTGGTATATCTGACGCTGGGAGCCTTGATGGCGCAGGTAATGCCGATACGCAAGCTCAAAGTGTATGT CATGACCGTCATGCTGGCGCTGACCGTAATTATCGGTGCCAGCCGTGTTTATCTAGGCGTACATTGGCCAACTGACGTGC TGGCTGGTTGGTTTGCAGGTGCATCATGGGCGCTCGGTTGGTGGATCATTGCTGAATTCTACAAGGTCAAATCGGGGAGC CGGGTTTGA
Upstream 100 bases:
>100_bases TCAGGTACAAAACTAATCTTTGAATCCAGAGCAGATAATGGATGGTTGCATTGATCAGGCTCCAGTAGCTCAGAAAAGAG AGCGGGTTTTTTATTGTTGA
Downstream 100 bases:
>100_bases AAGGACAATCATTTTACAAGCGAGTGGGTTTTGCCCTGTGCGGTCTGAAGATGGCGGCGCGGCGGGAGAAGAGCTTTCGC ACTCATCTGGTGGCTGCTGC
Product: phosphatidylglycerophosphatase B -like protein
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; Membrane-Associated Phospholipid Phosphatase; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Protein; PA-Phosphatase-Like Phosphoesterase; PAP2 Superfamily Protein; Phosphoesterase; Phosphatase; Phosphatidic Acid Phosphatase; Phosphatase PAP2-Like Family; Phospholipid Phosphatase; DedA/PAP2 Family Phospholipid Acid Phosphatase; Phosphoesterase PA-Phosphatase-Related Protein; Phosphatidylglycerophosphatase B -Like Protein; Transmembrane Acid Phosphatase Protein; PAP2 Superfamily; PAP2 Domain-Containing Protein; Integral Membrane Protein; Integral Membrane Phophoesterase; Phosphoesterase Pa-Phosphatase Like Protein; Phosphatidylglycerophosphatase; PAP2 Superfamily Membrane Protein; Phosphatidylglycerophosphatase B Homolog
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MAPKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSILLSLHTSSGPDNVLGPIWLQ AVARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLLASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHA MIAALVYLTLGALMAQVMPIRKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGS RV
Sequences:
>Translated_242_residues MAPKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSILLSLHTSSGPDNVLGPIWLQ AVARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLLASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHA MIAALVYLTLGALMAQVMPIRKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGS RV >Mature_241_residues APKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSILLSLHTSSGPDNVLGPIWLQA VARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLLASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHAM IAALVYLTLGALMAQVMPIRKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGSR V
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26231; Mature: 26099
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSI CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LLSLHTSSGPDNVLGPIWLQAVARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLL EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH ASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHAMIAALVYLTLGALMAQVMPI HCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH RKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGS HHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC RV CC >Mature Secondary Structure APKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSI CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LLSLHTSSGPDNVLGPIWLQAVARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLL EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH ASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHAMIAALVYLTLGALMAQVMPI HCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH RKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGS HHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC RV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA