| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858212
Identifier: 85858212
GI number: 85858212
Start: 367300
End: 367767
Strand: Direct
Name: 85858212
Synonym: SYN_01160
Alternate gene names: NA
Gene position: 367300-367767 (Clockwise)
Preceding gene: 85858211
Following gene: 85858217
Centisome position: 11.55
GC content: 50.43
Gene sequence:
>468_bases ATGGAACTGAAGGTTCCCCAGACACTCAGGCTGGAACATGTGGAACTGCGTGAGGAGCTTTACGCCCTTACAAAGGAAGA CAATGATCTCGGCATTGCGGCCCGTGACTTGATGGAGCTTTTTTATATGCATGCCATCAAGGAGGAAGAGAGGGTCCTGC CTGCCCTGGAAGCCCTGCCCTTCCTCGCTGAGGGAAAAATTACCGATTCGATGAGATTCCTGAAGGACATTGCCGATGAC CTGAAGGGAGGGCTCTATGGTGAACTCTTTGAGGATCACAAGGCCATCGTGGCGTCACTGAAGAATATTGCGCAATCGGC TCTTGACCAGGGCCGGAAGGAAGTGGTCAAATTTGTCGAGCGTTTTATTCTGCATGCCCAGATGGAAGAAGAAATCTTTT ATCCGGCGGCCCGGATGACTGCAGATTATTTTCAACTCCTGATGAAGTGCCGGACAGATTCTGATTAA
Upstream 100 bases:
>100_bases TTCGGGGGGCCATGACGGGCCCCCTGAGACTGTCCGGAGGCGTCAAAGCGCTCCTGCTTTAATAAAGGGCTACCGGGGTT GAAGGACGGGAGGTTCAAAG
Downstream 100 bases:
>100_bases TGGGGTTATAATCGGGCCTCGATGTCTTTATTGCTGCGGCGGGTCGGTCTTTCCTTCCCGCCGCCTTGAAATCTTCCCTG TTCTGAAAGAGATTATTTCA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MELKVPQTLRLEHVELREELYALTKEDNDLGIAARDLMELFYMHAIKEEERVLPALEALPFLAEGKITDSMRFLKDIADD LKGGLYGELFEDHKAIVASLKNIAQSALDQGRKEVVKFVERFILHAQMEEEIFYPAARMTADYFQLLMKCRTDSD
Sequences:
>Translated_155_residues MELKVPQTLRLEHVELREELYALTKEDNDLGIAARDLMELFYMHAIKEEERVLPALEALPFLAEGKITDSMRFLKDIADD LKGGLYGELFEDHKAIVASLKNIAQSALDQGRKEVVKFVERFILHAQMEEEIFYPAARMTADYFQLLMKCRTDSD >Mature_155_residues MELKVPQTLRLEHVELREELYALTKEDNDLGIAARDLMELFYMHAIKEEERVLPALEALPFLAEGKITDSMRFLKDIADD LKGGLYGELFEDHKAIVASLKNIAQSALDQGRKEVVKFVERFILHAQMEEEIFYPAARMTADYFQLLMKCRTDSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17911; Mature: 17911
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKVPQTLRLEHVELREELYALTKEDNDLGIAARDLMELFYMHAIKEEERVLPALEALP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FLAEGKITDSMRFLKDIADDLKGGLYGELFEDHKAIVASLKNIAQSALDQGRKEVVKFVE HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFILHAQMEEEIFYPAARMTADYFQLLMKCRTDSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MELKVPQTLRLEHVELREELYALTKEDNDLGIAARDLMELFYMHAIKEEERVLPALEALP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FLAEGKITDSMRFLKDIADDLKGGLYGELFEDHKAIVASLKNIAQSALDQGRKEVVKFVE HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFILHAQMEEEIFYPAARMTADYFQLLMKCRTDSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA