| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is purQ [H]
Identifier: 85858205
GI number: 85858205
Start: 357959
End: 358831
Strand: Direct
Name: purQ [H]
Synonym: SYN_00522
Alternate gene names: 85858205
Gene position: 357959-358831 (Clockwise)
Preceding gene: 85858204
Following gene: 85858206
Centisome position: 11.26
GC content: 57.04
Gene sequence:
>873_bases ATGACGGGGTCGCTGAAAGAAAACAAGGAACAGGGGAAGTTAAGAACAATGCCGCAACGGGTAAAATCCATGGTCATTAC GGGAAACGGGACGAACTGCGAGATGGAGATGGCTCACGCCTGCCGTCTTGCCGGTTCCGATGAAGTGGACATCGTCCATA TCAGCGACCTGATCAGTGGGGAAAAGCGTCTCGATGATTATCATTTTCTCAATCTGCCCGGAGGGTTTGTCGACGGCGAC GACCTCGGTTCCGCCAAGGCCAATGCCAACCGCCTGCTGCATGTCCGCATCCGGGGAACGGAAGAGCGGCTTTACGATTC GCTGCGCCGTTTCATCGCCGATGGCAAACTGATTCTGGGGGTCTGCAACGGTTTCCAGCTCATGGTCAAGCTGGGACTGC TGCCCGGTTTCGATGGCGACTATGCGACACAGACCGTAACACTGACCTATAATGACTCCGGAAAATTCGAGGATCGCTGG GTCTATCTGAAACCGGATCCCTCTTCCCCCTGTGTGTTCACCCGGGAGATGGAAGGAATTTATCTACCCGTCCGGCATGG GGAAGGAAAGCTGGTGCCGCGGGACGAAGGGATCCTGAAGCGGCTGCACGACCAGAGGCAGGTCGTTCTTCAATACAGCG ATTCATCCTTCCGGGAGGCTGTGATGGCCTATCCGCAGAATCCCAACGGCTCTACAAACGCCATCGCGGGCCTCTGCAAT GAAACGGGACGTCTTTTCGGTCTGATGCCGCACCCGGAGGCCTATCTGCATGCAACCAACCACCCCCGCTGGACCCGCGA GAAACTGCCGGAAGAGGGCCAGGGGCTGCAGATCTTCCGCAACGCGGTAAACTTTCTCCGCCGGGAACTATAG
Upstream 100 bases:
>100_bases AAAAAGTTCAATATTCAATGGGAGAGGACGGGGTTTTCCGCTGGGAAATAGAAAGTAGAACGCTGTGAGACAGGTTGTTT GATAACCAGACACCGCTCCG
Downstream 100 bases:
>100_bases TTTGACTTGATCGGGTTCAAATCTTTTCCCCCAGTATCAGGTAGCTGTGTCTGTCTGGAAGTTCAATGCAGGTCGGTTTC TCCGCAATAGACTCCTTCAA
Product: phosphoribosylformylglycinamidine synthase
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTGSLKENKEQGKLRTMPQRVKSMVITGNGTNCEMEMAHACRLAGSDEVDIVHISDLISGEKRLDDYHFLNLPGGFVDGD DLGSAKANANRLLHVRIRGTEERLYDSLRRFIADGKLILGVCNGFQLMVKLGLLPGFDGDYATQTVTLTYNDSGKFEDRW VYLKPDPSSPCVFTREMEGIYLPVRHGEGKLVPRDEGILKRLHDQRQVVLQYSDSSFREAVMAYPQNPNGSTNAIAGLCN ETGRLFGLMPHPEAYLHATNHPRWTREKLPEEGQGLQIFRNAVNFLRREL
Sequences:
>Translated_290_residues MTGSLKENKEQGKLRTMPQRVKSMVITGNGTNCEMEMAHACRLAGSDEVDIVHISDLISGEKRLDDYHFLNLPGGFVDGD DLGSAKANANRLLHVRIRGTEERLYDSLRRFIADGKLILGVCNGFQLMVKLGLLPGFDGDYATQTVTLTYNDSGKFEDRW VYLKPDPSSPCVFTREMEGIYLPVRHGEGKLVPRDEGILKRLHDQRQVVLQYSDSSFREAVMAYPQNPNGSTNAIAGLCN ETGRLFGLMPHPEAYLHATNHPRWTREKLPEEGQGLQIFRNAVNFLRREL >Mature_289_residues TGSLKENKEQGKLRTMPQRVKSMVITGNGTNCEMEMAHACRLAGSDEVDIVHISDLISGEKRLDDYHFLNLPGGFVDGDD LGSAKANANRLLHVRIRGTEERLYDSLRRFIADGKLILGVCNGFQLMVKLGLLPGFDGDYATQTVTLTYNDSGKFEDRWV YLKPDPSSPCVFTREMEGIYLPVRHGEGKLVPRDEGILKRLHDQRQVVLQYSDSSFREAVMAYPQNPNGSTNAIAGLCNE TGRLFGLMPHPEAYLHATNHPRWTREKLPEEGQGLQIFRNAVNFLRREL
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=281, Percent_Identity=33.0960854092527, Blast_Score=115, Evalue=6e-26, Organism=Escherichia coli, GI48994899, Length=267, Percent_Identity=36.7041198501873, Blast_Score=139, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17553022, Length=276, Percent_Identity=28.2608695652174, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321498, Length=282, Percent_Identity=31.2056737588652, Blast_Score=106, Evalue=4e-24, Organism=Drosophila melanogaster, GI24582111, Length=245, Percent_Identity=38.7755102040816, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24582109, Length=245, Percent_Identity=38.7755102040816, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI17137292, Length=245, Percent_Identity=38.7755102040816, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR010075 - InterPro: IPR002818 [H]
Pfam domain/function: PF01965 DJ-1_PfpI [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 32637; Mature: 32505
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSLKENKEQGKLRTMPQRVKSMVITGNGTNCEMEMAHACRLAGSDEVDIVHISDLISG CCCCCCCCHHCCHHHHHHHHHHEEEEECCCCCCEEHHHHHHHCCCCCCEEEEEHHHHHCC EKRLDDYHFLNLPGGFVDGDDLGSAKANANRLLHVRIRGTEERLYDSLRRFIADGKLILG HHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEE VCNGFQLMVKLGLLPGFDGDYATQTVTLTYNDSGKFEDRWVYLKPDPSSPCVFTREMEGI ECCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCE YLPVRHGEGKLVPRDEGILKRLHDQRQVVLQYSDSSFREAVMAYPQNPNGSTNAIAGLCN EEEEECCCCCCCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHC ETGRLFGLMPHPEAYLHATNHPRWTREKLPEEGQGLQIFRNAVNFLRREL CCCCEEEECCCCHHEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TGSLKENKEQGKLRTMPQRVKSMVITGNGTNCEMEMAHACRLAGSDEVDIVHISDLISG CCCCCCCHHCCHHHHHHHHHHEEEEECCCCCCEEHHHHHHHCCCCCCEEEEEHHHHHCC EKRLDDYHFLNLPGGFVDGDDLGSAKANANRLLHVRIRGTEERLYDSLRRFIADGKLILG HHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEE VCNGFQLMVKLGLLPGFDGDYATQTVTLTYNDSGKFEDRWVYLKPDPSSPCVFTREMEGI ECCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCE YLPVRHGEGKLVPRDEGILKRLHDQRQVVLQYSDSSFREAVMAYPQNPNGSTNAIAGLCN EEEEECCCCCCCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHC ETGRLFGLMPHPEAYLHATNHPRWTREKLPEEGQGLQIFRNAVNFLRREL CCCCEEEECCCCHHEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA