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The map label for this gene is 85375637

Identifier: 85375637

GI number: 85375637

Start: 2827459

End: 2828115

Strand: Direct

Name: 85375637

Synonym: ELI_14050

Alternate gene names: NA

Gene position: 2827459-2828115 (Clockwise)

Preceding gene: 85375615

Following gene: 85375639

Centisome position: 92.63

GC content: 66.51

Gene sequence:

>657_bases
ATGGTCATGAAACCGCTGCGCGGGCTCTACAACTGGACGATGGAGAAAGCCGCGCATCCCGCCGCCGAATGGTGGCTGGC
GTTCTTCTGCTTCATCGAAGCGAGCTTCTTCCCGATCCCGCCGCATCCGCTGCTGGGCCTGATGTGCCTGGCCGCGCCGC
AAAAGGCGCTGCGGTTCGGGATCATCGCGACCTTGAGTTCGGTGGTGGGCGGGCTGTTCGGCTATTTTATCGGCTGGGCG
CTGTTCGACAGCGTCGGGGTGCCGCTGCTCGGCGCCATCGGCCTGCTCGATGCCTTGCCGGCGGCGCAGTGTACCTTCGA
CGAATACGGCGTCGCCGCGGTCATCATCGCCGGGGCGACCCCGGTGCCGTTCAAGCTGCTGACCATCACGGCGGGGTTCC
TCGGCATGGCGCTGGTGCCTTTCATCCTGGCCAGCCTGGCCGGACGCGGGCTGATCTTCTTCACCGTCGGCCTGCTGTTC
CGCATCTTCGGCGCGCCGATCAAGCTCTTCATCGACAAATATCTCGGCACCGTGACAACCGCCTTCGTCGTACTGGTCGT
GGGCGGGGTACTCGCCATCACGCAGCTGGGCGGCGGCGGCGACGACGAAGATCCGTGTGCGGGCGCGGAACGCGAAGCAC
CGGCTCCGGCCCGCTAG

Upstream 100 bases:

>100_bases
ATGTCAATAGAAAAGTGCCAAATAGGTTAGTTTGATATTCGGTTGCGTGCCGTCGCGCCCTGCCGTAATCGGCTGCAAAG
GCAATCGGGACCCCCCTCTC

Downstream 100 bases:

>100_bases
GCCCAGTCCGCCAGACGCTCGCGGTCCTTCACCACAATCCGGCGGTACCCGCGCTCGATACAGCCCGCCTGCTCGAGCGT
CTTGAGCGCGGCATTGGCGG

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MVMKPLRGLYNWTMEKAAHPAAEWWLAFFCFIEASFFPIPPHPLLGLMCLAAPQKALRFGIIATLSSVVGGLFGYFIGWA
LFDSVGVPLLGAIGLLDALPAAQCTFDEYGVAAVIIAGATPVPFKLLTITAGFLGMALVPFILASLAGRGLIFFTVGLLF
RIFGAPIKLFIDKYLGTVTTAFVVLVVGGVLAITQLGGGGDDEDPCAGAEREAPAPAR

Sequences:

>Translated_218_residues
MVMKPLRGLYNWTMEKAAHPAAEWWLAFFCFIEASFFPIPPHPLLGLMCLAAPQKALRFGIIATLSSVVGGLFGYFIGWA
LFDSVGVPLLGAIGLLDALPAAQCTFDEYGVAAVIIAGATPVPFKLLTITAGFLGMALVPFILASLAGRGLIFFTVGLLF
RIFGAPIKLFIDKYLGTVTTAFVVLVVGGVLAITQLGGGGDDEDPCAGAEREAPAPAR
>Mature_218_residues
MVMKPLRGLYNWTMEKAAHPAAEWWLAFFCFIEASFFPIPPHPLLGLMCLAAPQKALRFGIIATLSSVVGGLFGYFIGWA
LFDSVGVPLLGAIGLLDALPAAQCTFDEYGVAAVIIAGATPVPFKLLTITAGFLGMALVPFILASLAGRGLIFFTVGLLF
RIFGAPIKLFIDKYLGTVTTAFVVLVVGGVLAITQLGGGGDDEDPCAGAEREAPAPAR

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22936; Mature: 22936

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMKPLRGLYNWTMEKAAHPAAEWWLAFFCFIEASFFPIPPHPLLGLMCLAAPQKALRFG
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IIATLSSVVGGLFGYFIGWALFDSVGVPLLGAIGLLDALPAAQCTFDEYGVAAVIIAGAT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCHHHCCCEEEEEECCC
PVPFKLLTITAGFLGMALVPFILASLAGRGLIFFTVGLLFRIFGAPIKLFIDKYLGTVTT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AFVVLVVGGVLAITQLGGGGDDEDPCAGAEREAPAPAR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVMKPLRGLYNWTMEKAAHPAAEWWLAFFCFIEASFFPIPPHPLLGLMCLAAPQKALRFG
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IIATLSSVVGGLFGYFIGWALFDSVGVPLLGAIGLLDALPAAQCTFDEYGVAAVIIAGAT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCHHHCCCEEEEEECCC
PVPFKLLTITAGFLGMALVPFILASLAGRGLIFFTVGLLFRIFGAPIKLFIDKYLGTVTT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AFVVLVVGGVLAITQLGGGGDDEDPCAGAEREAPAPAR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]