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The map label for this gene is ycjD [C]

Identifier: 85375143

GI number: 85375143

Start: 2337248

End: 2337607

Strand: Direct

Name: ycjD [C]

Synonym: ELI_11580

Alternate gene names: 85375143

Gene position: 2337248-2337607 (Clockwise)

Preceding gene: 85375142

Following gene: 85375148

Centisome position: 76.57

GC content: 62.5

Gene sequence:

>360_bases
GTGCCCACCTGGAATCCCCGCAACACCAAGCGCGCCCGCAAACTGCGCAACACGGCCACCCCGGCAGAACAACGCCTGTG
GCAACACCTCTCGCGATCACAGCCGGGCGCAAAGTTCAGCCGCCAGATGCCGGTCGGCCCATGGTATGCCGACTTCCTCT
GCCGCGAACTCAAGCTGGTGATCGAACTCGACGGCTTCAGCCACGACGTCCAGCCCGACCGCGACGAGCGGCGCGATGCG
GACCTGCGCGAGCTGGGCTATCACGTGCTCCACTTCACCAATGCCGATGTGATGAACAACACCGAAGGCGTAGTGATCGC
CATCCAGCGAAAGATCGCAGATCTGCGTGGTTTGAAATAG

Upstream 100 bases:

>100_bases
CCCTTACCTTCCAGCAAGCGGGAGTGGTAGCGACTTGATCCGGGCCTAATCGCAGCGGGGTGGTCTTCCCGGGCGCAACA
CTAAGAGGCAATCTTGCCAA

Downstream 100 bases:

>100_bases
AAGGCACAACCAATTTCCCACCCGCCTGCGGAAGGGAAGCGAGACGTTGTGCTTGAGCGCTTAGTCGCAGCAGGGTGGGC
AAATCCAGACAGCAGAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MPTWNPRNTKRARKLRNTATPAEQRLWQHLSRSQPGAKFSRQMPVGPWYADFLCRELKLVIELDGFSHDVQPDRDERRDA
DLRELGYHVLHFTNADVMNNTEGVVIAIQRKIADLRGLK

Sequences:

>Translated_119_residues
MPTWNPRNTKRARKLRNTATPAEQRLWQHLSRSQPGAKFSRQMPVGPWYADFLCRELKLVIELDGFSHDVQPDRDERRDA
DLRELGYHVLHFTNADVMNNTEGVVIAIQRKIADLRGLK
>Mature_118_residues
PTWNPRNTKRARKLRNTATPAEQRLWQHLSRSQPGAKFSRQMPVGPWYADFLCRELKLVIELDGFSHDVQPDRDERRDAD
LRELGYHVLHFTNADVMNNTEGVVIAIQRKIADLRGLK

Specific function: Unknown

COG id: COG2852

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjD and H.influenzae HI_1162 [H]

Homologues:

Organism=Escherichia coli, GI1787546, Length=102, Percent_Identity=40.1960784313725, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007569
- InterPro:   IPR011335 [H]

Pfam domain/function: PF04480 DUF559 [H]

EC number: NA

Molecular weight: Translated: 13878; Mature: 13747

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTWNPRNTKRARKLRNTATPAEQRLWQHLSRSQPGAKFSRQMPVGPWYADFLCRELKLV
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHH
IELDGFSHDVQPDRDERRDADLRELGYHVLHFTNADVMNNTEGVVIAIQRKIADLRGLK
EEECCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHCCCC
>Mature Secondary Structure 
PTWNPRNTKRARKLRNTATPAEQRLWQHLSRSQPGAKFSRQMPVGPWYADFLCRELKLV
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHH
IELDGFSHDVQPDRDERRDADLRELGYHVLHFTNADVMNNTEGVVIAIQRKIADLRGLK
EEECCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]