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The map label for this gene is yaaJ [C]

Identifier: 85375048

GI number: 85375048

Start: 2242943

End: 2244460

Strand: Direct

Name: yaaJ [C]

Synonym: ELI_11105

Alternate gene names: 85375048

Gene position: 2242943-2244460 (Clockwise)

Preceding gene: 85375044

Following gene: 85375049

Centisome position: 73.48

GC content: 62.58

Gene sequence:

>1518_bases
GTGGCCGCTGCAGAAACCGGGTCGACCAGTCTGATCGACCAAGTCACCAACGTATCCGATTTCATCTGGGTCGGCACGTG
GAACGGGGTGGAAGTCCTCCCCTTCCCGCCGATGACCATCGTCCTGCTGGGTATCGGCCTATGGATCATGGTCGGTCTCA
AGTTCTACCCGATCGTCAAGCTCGGCAGCGCCTTCAAAGGGCTGTTCGCCGGACGCAAGGGCTCGGGAGACGGGGAAATC
TCGCCCTTCGCCGCACTTTCGACCGCGCTCTCGGGGCAGGTCGGGACGGGCAATCTGGCCGGTGTCGCGACCGCCATCGC
GCTGGGTGGGCCGGGCGCGATCTTCTGGATGTGGATCACCGCGCTGTTCGGCATGGCACTCGCCTTTGCAGAGGGCAGCC
TCGCCATCCGCTATCGTGAGCGCACCAGCGACGGCGTGCTGCGCGGCGGGCCGATGACCTACATCATGATGGGCCTAGGC
CCGAAATGGACCTGGCTGGCGATCCTGTTCTGCCTCGGCACGCTGTTTTCGGCCATGGTCACGGGCAATTCGATCCAAGC
CAATGCAATCGCCGACGGCATGAACGAACTGTTCGGTATCGAGGAATGGATGGGCGGGCTGATCACCGCGATCCTCGTCT
TCATCGTCATCGTCGGCGGCATCAAGTCGATCGGTTCGGTGGCGGAGAAGGTCATTCCCTTCATGGCGGCGTCCTATATC
GTCATGGCGCTGATCGCCCTGATCCTCAATTTCGGCGACCTGCCGGAAACCTTCGCGCTAATCTTCAACGGCGCGTTCAA
CCCGCAGGCGGCGACCGGCGGCTTCGTCGGCGCGGCCATCATCCTCGCCATCCGTGCCGGTGTCGCACGCGGCCTGTTCT
CCAACGAGGCGGGCCAAGGCTCGACCGCTATCGCCCACGCCGTCGCGCAGACCAACGATCCCGAACAGCAGGGCCGCATG
GCCATGCTCGGCACCTTCATCGACACGATAGTGATCTGCACCATGACAGCGCTGGTAATCCTGACCGTTGAAGGCCAGTT
TACCGGTGGCGGCGAAGCGGTACGCCATGCGTGGAATTCGGACCTCACAGGGTTCGCGATGACCAGCGGGGCTTTCGCAG
CCGCGTTCCCGGTCGAAATCTTCTCGATCCCGATCGGTACACTGATCGCTTCGACCGCGCTGATCCTGTTTGTTTTCACG
ACCTTGCTGACGTGGAGTTATTACGGCGAACGCGCGATCACCTTCATGTACGACCGTATCCCCGGCTCGAGCCGCGGCGG
CGAGAAGATCCTGCACATGGCGTGGCGCGTGCTGTGGTGTGTGGTGATCTATATCGGCTCCACGCAGGACCTCGAACTGG
TCTGGCGCTTGGGCGACATTTCGAACGCTGCAATGGCGCTGCCCAACCTGCTGGCGCTTGCGCTGCTCAGCGGCGTCGTG
TTCAAGCTGGCCAAGGGTCAGAAAGATGCGGGCAGGACCTTCACCGCCGATACGCCCGAAGAGCCGGAGGAATATTAA

Upstream 100 bases:

>100_bases
AGCAAGACGCTTGGGAGGTGACGGAAAATCCCGTTGCAGCACCGGCACCTTGCCCCTAGCGTGCGCGACATCAAACGGGA
CGCATGAGGGGGAGCCAAGA

Downstream 100 bases:

>100_bases
CCCTCCGCCGCTAAGGCGCCGACACCACCAAGAATGAAGGGGCCGGAACGCGCTAAGCGTCCCGGCCCCTTTTTTTGGCA
CTGCCGCCCTCCGGGGATCT

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MAAAETGSTSLIDQVTNVSDFIWVGTWNGVEVLPFPPMTIVLLGIGLWIMVGLKFYPIVKLGSAFKGLFAGRKGSGDGEI
SPFAALSTALSGQVGTGNLAGVATAIALGGPGAIFWMWITALFGMALAFAEGSLAIRYRERTSDGVLRGGPMTYIMMGLG
PKWTWLAILFCLGTLFSAMVTGNSIQANAIADGMNELFGIEEWMGGLITAILVFIVIVGGIKSIGSVAEKVIPFMAASYI
VMALIALILNFGDLPETFALIFNGAFNPQAATGGFVGAAIILAIRAGVARGLFSNEAGQGSTAIAHAVAQTNDPEQQGRM
AMLGTFIDTIVICTMTALVILTVEGQFTGGGEAVRHAWNSDLTGFAMTSGAFAAAFPVEIFSIPIGTLIASTALILFVFT
TLLTWSYYGERAITFMYDRIPGSSRGGEKILHMAWRVLWCVVIYIGSTQDLELVWRLGDISNAAMALPNLLALALLSGVV
FKLAKGQKDAGRTFTADTPEEPEEY

Sequences:

>Translated_505_residues
MAAAETGSTSLIDQVTNVSDFIWVGTWNGVEVLPFPPMTIVLLGIGLWIMVGLKFYPIVKLGSAFKGLFAGRKGSGDGEI
SPFAALSTALSGQVGTGNLAGVATAIALGGPGAIFWMWITALFGMALAFAEGSLAIRYRERTSDGVLRGGPMTYIMMGLG
PKWTWLAILFCLGTLFSAMVTGNSIQANAIADGMNELFGIEEWMGGLITAILVFIVIVGGIKSIGSVAEKVIPFMAASYI
VMALIALILNFGDLPETFALIFNGAFNPQAATGGFVGAAIILAIRAGVARGLFSNEAGQGSTAIAHAVAQTNDPEQQGRM
AMLGTFIDTIVICTMTALVILTVEGQFTGGGEAVRHAWNSDLTGFAMTSGAFAAAFPVEIFSIPIGTLIASTALILFVFT
TLLTWSYYGERAITFMYDRIPGSSRGGEKILHMAWRVLWCVVIYIGSTQDLELVWRLGDISNAAMALPNLLALALLSGVV
FKLAKGQKDAGRTFTADTPEEPEEY
>Mature_504_residues
AAAETGSTSLIDQVTNVSDFIWVGTWNGVEVLPFPPMTIVLLGIGLWIMVGLKFYPIVKLGSAFKGLFAGRKGSGDGEIS
PFAALSTALSGQVGTGNLAGVATAIALGGPGAIFWMWITALFGMALAFAEGSLAIRYRERTSDGVLRGGPMTYIMMGLGP
KWTWLAILFCLGTLFSAMVTGNSIQANAIADGMNELFGIEEWMGGLITAILVFIVIVGGIKSIGSVAEKVIPFMAASYIV
MALIALILNFGDLPETFALIFNGAFNPQAATGGFVGAAIILAIRAGVARGLFSNEAGQGSTAIAHAVAQTNDPEQQGRMA
MLGTFIDTIVICTMTALVILTVEGQFTGGGEAVRHAWNSDLTGFAMTSGAFAAAFPVEIFSIPIGTLIASTALILFVFTT
LLTWSYYGERAITFMYDRIPGSSRGGEKILHMAWRVLWCVVIYIGSTQDLELVWRLGDISNAAMALPNLLALALLSGVVF
KLAKGQKDAGRTFTADTPEEPEEY

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=482, Percent_Identity=33.6099585062241, Blast_Score=217, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 53314; Mature: 53183

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAETGSTSLIDQVTNVSDFIWVGTWNGVEVLPFPPMTIVLLGIGLWIMVGLKFYPIVK
CCCCCCCCHHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LGSAFKGLFAGRKGSGDGEISPFAALSTALSGQVGTGNLAGVATAIALGGPGAIFWMWIT
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
ALFGMALAFAEGSLAIRYRERTSDGVLRGGPMTYIMMGLGPKWTWLAILFCLGTLFSAMV
HHHHHHHHHCCCCEEEEEECCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
TGNSIQANAIADGMNELFGIEEWMGGLITAILVFIVIVGGIKSIGSVAEKVIPFMAASYI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMALIALILNFGDLPETFALIFNGAFNPQAATGGFVGAAIILAIRAGVARGLFSNEAGQG
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
STAIAHAVAQTNDPEQQGRMAMLGTFIDTIVICTMTALVILTVEGQFTGGGEAVRHAWNS
HHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCC
DLTGFAMTSGAFAAAFPVEIFSIPIGTLIASTALILFVFTTLLTWSYYGERAITFMYDRI
CCCCEEECCCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
PGSSRGGEKILHMAWRVLWCVVIYIGSTQDLELVWRLGDISNAAMALPNLLALALLSGVV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHEEECCCCCHHHHHHHHHHHHHHHHHHH
FKLAKGQKDAGRTFTADTPEEPEEY
HHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAAETGSTSLIDQVTNVSDFIWVGTWNGVEVLPFPPMTIVLLGIGLWIMVGLKFYPIVK
CCCCCCCHHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LGSAFKGLFAGRKGSGDGEISPFAALSTALSGQVGTGNLAGVATAIALGGPGAIFWMWIT
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
ALFGMALAFAEGSLAIRYRERTSDGVLRGGPMTYIMMGLGPKWTWLAILFCLGTLFSAMV
HHHHHHHHHCCCCEEEEEECCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
TGNSIQANAIADGMNELFGIEEWMGGLITAILVFIVIVGGIKSIGSVAEKVIPFMAASYI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMALIALILNFGDLPETFALIFNGAFNPQAATGGFVGAAIILAIRAGVARGLFSNEAGQG
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
STAIAHAVAQTNDPEQQGRMAMLGTFIDTIVICTMTALVILTVEGQFTGGGEAVRHAWNS
HHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCC
DLTGFAMTSGAFAAAFPVEIFSIPIGTLIASTALILFVFTTLLTWSYYGERAITFMYDRI
CCCCEEECCCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
PGSSRGGEKILHMAWRVLWCVVIYIGSTQDLELVWRLGDISNAAMALPNLLALALLSGVV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHEEECCCCCHHHHHHHHHHHHHHHHHHH
FKLAKGQKDAGRTFTADTPEEPEEY
HHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]