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The map label for this gene is ybjZ [C]

Identifier: 85375034

GI number: 85375034

Start: 2228524

End: 2229660

Strand: Direct

Name: ybjZ [C]

Synonym: ELI_11035

Alternate gene names: 85375034

Gene position: 2228524-2229660 (Clockwise)

Preceding gene: 85375032

Following gene: 85375035

Centisome position: 73.01

GC content: 62.62

Gene sequence:

>1137_bases
ATGCTCTGGATCGCGATCCGCATGCTTACCGGCGACAAGCAGAAGTTCTACGGGCTCGTGTTCGGGATCGCGTTCTCTAC
CCTGCTCATCACCCAGCAGCTGACCATCTTCGTCAACCTGATCGAGCGCGGCGCAAGCGGGGTTTACAATGTCCCGACCG
CCGACGTGTGGGTGATGGACGAGGTCAGCCGCACCACCGAGGTTAACTTTCCCATGCCCTCGACCGCGCTCGACAAGGTA
CGTGCCGTACCCGGTGTCGAATGGGCGGTGGTCCATCTGCGCGCCGGCGCATCGGTGCGGACACGCGAGGGCGATCTGGA
AGGTGTCGCCGTGATCGGGGTCGACGACGCCACGCTGATCGGCCTGCCCAAGAATATTCTGGAAGGTAGCGCCGACGTCC
TGTCCCAGCCCGACAGCGTCATTATCGACGATGTCGGCGTAACCAACATGTTCGAGGATGGCCGCAGCCCGATCGGCGAG
CGGCTGGAGCTCAATGACCAGCGTGCCGTCATCCGCGGCGTAGCCGACTCGATCCCCAGCTTCACCAGCCAAGTCACGCT
CTATACCAAATACAGCCAGGCGCTGCGTTACGTACCGGGTACGCGCAACCGGCTGAGCTTCGTGCTGGTCGGTGCTGCCG
ACGGCGTGACGCAGGCCGAACTCGCCGCCCGCATCGAGGAACAGACAGGCCTCCGCGCCCGGACCCGCGACCAATTCGCA
CAGGACGGTGTCGACTTCATCATCGAGAACACCGGCATTCCGCTCAATTTCGGAATCACCGTCGCGCTGGGCTTCATCGT
GGGTGTCGCGATCGTCGGCCTGACCTTCAGCCTCTTCATCCGCGACAACATCAAGCAGTTCGGCGCGTTGAAAGCGATCG
GCGTGACCAATGCCAAGATCAGGAAGATGGTCGCTACGCAGGCGGGCTTGGTCGGACTGATCGGCTATGGGCTTGGCGTA
CTCGGCACCATCGGCTTTATCTATGCCTTCTCCGGCGTGCCCACTTTCAAGGGGTTCTACATTCCCTGGCAGATCCCGCT
GGTCAGTCTCGCCGCGGTCTTCATCATCCTCGCGCTGACCGGCTGGCTGGCGCTGCGCAATGTCCTCAAGACCGAACCTG
CGGCGGTGTTCCGGTGA

Upstream 100 bases:

>100_bases
CAAAGTGAACGGCCCCGTTCAATTAAACGCTACCGTTCAATAATGGCCGCTCGCGCTTGATTCGACAACCCCGGCCGAAA
GCAGAGGTTTCCCCCGCCCT

Downstream 100 bases:

>100_bases
GCGACGTGCAGGAAAGCGATGCCCGCGAAAGCCTCGACGCCACGCTCAGCAACGGTGGCACGGTTGCGATCTGCACACGC
GGTGTCACACGCGACTTCGA

Product: ABC-transporter permease protein, putative

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Transporter Permease Protein; Efflux ABC Transporter Permease Protein; ABC-Type Export System Membrane Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Efflux Pump Inner Membrane Subunit; ABC-Type Transport System Permease Component; ABC Transporter Permease Component

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MLWIAIRMLTGDKQKFYGLVFGIAFSTLLITQQLTIFVNLIERGASGVYNVPTADVWVMDEVSRTTEVNFPMPSTALDKV
RAVPGVEWAVVHLRAGASVRTREGDLEGVAVIGVDDATLIGLPKNILEGSADVLSQPDSVIIDDVGVTNMFEDGRSPIGE
RLELNDQRAVIRGVADSIPSFTSQVTLYTKYSQALRYVPGTRNRLSFVLVGAADGVTQAELAARIEEQTGLRARTRDQFA
QDGVDFIIENTGIPLNFGITVALGFIVGVAIVGLTFSLFIRDNIKQFGALKAIGVTNAKIRKMVATQAGLVGLIGYGLGV
LGTIGFIYAFSGVPTFKGFYIPWQIPLVSLAAVFIILALTGWLALRNVLKTEPAAVFR

Sequences:

>Translated_378_residues
MLWIAIRMLTGDKQKFYGLVFGIAFSTLLITQQLTIFVNLIERGASGVYNVPTADVWVMDEVSRTTEVNFPMPSTALDKV
RAVPGVEWAVVHLRAGASVRTREGDLEGVAVIGVDDATLIGLPKNILEGSADVLSQPDSVIIDDVGVTNMFEDGRSPIGE
RLELNDQRAVIRGVADSIPSFTSQVTLYTKYSQALRYVPGTRNRLSFVLVGAADGVTQAELAARIEEQTGLRARTRDQFA
QDGVDFIIENTGIPLNFGITVALGFIVGVAIVGLTFSLFIRDNIKQFGALKAIGVTNAKIRKMVATQAGLVGLIGYGLGV
LGTIGFIYAFSGVPTFKGFYIPWQIPLVSLAAVFIILALTGWLALRNVLKTEPAAVFR
>Mature_378_residues
MLWIAIRMLTGDKQKFYGLVFGIAFSTLLITQQLTIFVNLIERGASGVYNVPTADVWVMDEVSRTTEVNFPMPSTALDKV
RAVPGVEWAVVHLRAGASVRTREGDLEGVAVIGVDDATLIGLPKNILEGSADVLSQPDSVIIDDVGVTNMFEDGRSPIGE
RLELNDQRAVIRGVADSIPSFTSQVTLYTKYSQALRYVPGTRNRLSFVLVGAADGVTQAELAARIEEQTGLRARTRDQFA
QDGVDFIIENTGIPLNFGITVALGFIVGVAIVGLTFSLFIRDNIKQFGALKAIGVTNAKIRKMVATQAGLVGLIGYGLGV
LGTIGFIYAFSGVPTFKGFYIPWQIPLVSLAAVFIILALTGWLALRNVLKTEPAAVFR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40784; Mature: 40784

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWIAIRMLTGDKQKFYGLVFGIAFSTLLITQQLTIFVNLIERGASGVYNVPTADVWVMD
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEE
EVSRTTEVNFPMPSTALDKVRAVPGVEWAVVHLRAGASVRTREGDLEGVAVIGVDDATLI
CCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCEEEEECCCCEEE
GLPKNILEGSADVLSQPDSVIIDDVGVTNMFEDGRSPIGERLELNDQRAVIRGVADSIPS
CCCHHHHCCCHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
FTSQVTLYTKYSQALRYVPGTRNRLSFVLVGAADGVTQAELAARIEEQTGLRARTRDQFA
HHHHEEEEEEHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHH
QDGVDFIIENTGIPLNFGITVALGFIVGVAIVGLTFSLFIRDNIKQFGALKAIGVTNAKI
HCCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
RKMVATQAGLVGLIGYGLGVLGTIGFIYAFSGVPTFKGFYIPWQIPLVSLAAVFIILALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
GWLALRNVLKTEPAAVFR
HHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MLWIAIRMLTGDKQKFYGLVFGIAFSTLLITQQLTIFVNLIERGASGVYNVPTADVWVMD
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEE
EVSRTTEVNFPMPSTALDKVRAVPGVEWAVVHLRAGASVRTREGDLEGVAVIGVDDATLI
CCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCEEEEECCCCEEE
GLPKNILEGSADVLSQPDSVIIDDVGVTNMFEDGRSPIGERLELNDQRAVIRGVADSIPS
CCCHHHHCCCHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
FTSQVTLYTKYSQALRYVPGTRNRLSFVLVGAADGVTQAELAARIEEQTGLRARTRDQFA
HHHHEEEEEEHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHH
QDGVDFIIENTGIPLNFGITVALGFIVGVAIVGLTFSLFIRDNIKQFGALKAIGVTNAKI
HCCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
RKMVATQAGLVGLIGYGLGVLGTIGFIYAFSGVPTFKGFYIPWQIPLVSLAAVFIILALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
GWLALRNVLKTEPAAVFR
HHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA