Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
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Accession | NC_007722 |
Length | 3,052,398 |
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The map label for this gene is thiDE [H]
Identifier: 85374878
GI number: 85374878
Start: 2081893
End: 2082702
Strand: Direct
Name: thiDE [H]
Synonym: ELI_10255
Alternate gene names: 85374878
Gene position: 2081893-2082702 (Clockwise)
Preceding gene: 85374877
Following gene: 85374882
Centisome position: 68.21
GC content: 65.43
Gene sequence:
>810_bases ATGAGCCGCCAGCCACCGCGTATTCTCGCGATTGCCGGCTCCGACAGTTCGGGCGGCGCAGGGATCCAGGCCGATATCAA GACGATTACCATGCTGGGCGGTTATGCGATGACCGCCATCACTGCGGTCACGGCCCAGAACTCGGTCGGCGTACAGGGCA TCACGCCGCTCGATGGCGCATTCGTCGGCCAGCAGATCGCATCGGCAATCGATGATATCGGCGTCGACGCGATCAAGATC GGCATGCTTCAGAACGAGGACATTATCCTCGCCGTGGCCAACGCTTTGGAAGAGATCGATCCGCAAGTTCCCATCGTGCT CGACCCGGTCATGGTGGCGACATCGGGTGCGCCGCTGGTGGTGCAGGATGCCGTCGCTACAATGCGCGAGCGGCTGTTCA CCAAGGCACGGCTGCTGACTCCCAACCTGCCCGAACTCGAATTGCTGGCTGGCAAGCAATTGCGCACGACCGAGCTCGTC CGCGAGGCAGCCGAAGATCTTGCGCGCCATTACGGCTGCGATGTGCTGGCCAAGGGCGGGCACACCGCTGACGAGCGGAT CATCGATGTGCTGGTGCCGGTCGGCGGGCGCATGGCGCAATTCGACGATGCGCGGATCGACACGCGCCACACCCATGGCA CCGGCTGCACGCTGTCATCCGCCATCGCGACCCTGCTCGGCCACGGCCAGCCGATGGAGCACGCCGTGCGGCTGGCGCGG CGATTCGTCCGTGAGGCGATCGAGAACGCGCCCGGTTTCGGCGACGGGGCCGGGCCCCTCGGGCACCAGGCGGTACGGTT GAAGAGCTAG
Upstream 100 bases:
>100_bases ATCTCTGCCCCAATTGCGGCGGCGAACTGATGGATCGCCCGACCCGCGCGGCCAAACTGCTGGAGAAGTTTCCCGCGAGT ACCGAACGGAAGCTCAGGAA
Downstream 100 bases:
>100_bases CGGTCGATGTCGTAGAAGTCGGCGATGTGGCCCCACGCCTCATCCGCCGTCTCGCACCACGTAATCAGGTCGAGGTCCTG TTTCGAGATCGTGCCTTCCT
Product: hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
Products: NA
Alternate protein names: Thiamine-phosphate pyrophosphorylase; TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSRQPPRILAIAGSDSSGGAGIQADIKTITMLGGYAMTAITAVTAQNSVGVQGITPLDGAFVGQQIASAIDDIGVDAIKI GMLQNEDIILAVANALEEIDPQVPIVLDPVMVATSGAPLVVQDAVATMRERLFTKARLLTPNLPELELLAGKQLRTTELV REAAEDLARHYGCDVLAKGGHTADERIIDVLVPVGGRMAQFDDARIDTRHTHGTGCTLSSAIATLLGHGQPMEHAVRLAR RFVREAIENAPGFGDGAGPLGHQAVRLKS
Sequences:
>Translated_269_residues MSRQPPRILAIAGSDSSGGAGIQADIKTITMLGGYAMTAITAVTAQNSVGVQGITPLDGAFVGQQIASAIDDIGVDAIKI GMLQNEDIILAVANALEEIDPQVPIVLDPVMVATSGAPLVVQDAVATMRERLFTKARLLTPNLPELELLAGKQLRTTELV REAAEDLARHYGCDVLAKGGHTADERIIDVLVPVGGRMAQFDDARIDTRHTHGTGCTLSSAIATLLGHGQPMEHAVRLAR RFVREAIENAPGFGDGAGPLGHQAVRLKS >Mature_268_residues SRQPPRILAIAGSDSSGGAGIQADIKTITMLGGYAMTAITAVTAQNSVGVQGITPLDGAFVGQQIASAIDDIGVDAIKIG MLQNEDIILAVANALEEIDPQVPIVLDPVMVATSGAPLVVQDAVATMRERLFTKARLLTPNLPELELLAGKQLRTTELVR EAAEDLARHYGCDVLAKGGHTADERIIDVLVPVGGRMAQFDDARIDTRHTHGTGCTLSSAIATLLGHGQPMEHAVRLARR FVREAIENAPGFGDGAGPLGHQAVRLKS
Specific function: Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P [H]
COG id: COG0351
COG function: function code H; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the thiD family [H]
Homologues:
Organism=Escherichia coli, GI1788420, Length=258, Percent_Identity=44.1860465116279, Blast_Score=178, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6325378, Length=270, Percent_Identity=35.9259259259259, Blast_Score=144, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6324997, Length=252, Percent_Identity=40.0793650793651, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324517, Length=252, Percent_Identity=40.0793650793651, Blast_Score=130, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR013749 - InterPro: IPR004399 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF08543 Phos_pyr_kin; PF02581 TMP-TENI [H]
EC number: =2.5.1.3; =2.7.1.49; =2.7.4.7 [H]
Molecular weight: Translated: 28217; Mature: 28086
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQPPRILAIAGSDSSGGAGIQADIKTITMLGGYAMTAITAVTAQNSVGVQGITPLDGA CCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHH FVGQQIASAIDDIGVDAIKIGMLQNEDIILAVANALEEIDPQVPIVLDPVMVATSGAPLV HHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCCEEECCCEEECCCCCEE VQDAVATMRERLFTKARLLTPNLPELELLAGKQLRTTELVREAAEDLARHYGCDVLAKGG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCC HTADERIIDVLVPVGGRMAQFDDARIDTRHTHGTGCTLSSAIATLLGHGQPMEHAVRLAR CCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH RFVREAIENAPGFGDGAGPLGHQAVRLKS HHHHHHHHCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure SRQPPRILAIAGSDSSGGAGIQADIKTITMLGGYAMTAITAVTAQNSVGVQGITPLDGA CCCCCEEEEEECCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHH FVGQQIASAIDDIGVDAIKIGMLQNEDIILAVANALEEIDPQVPIVLDPVMVATSGAPLV HHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCCEEECCCEEECCCCCEE VQDAVATMRERLFTKARLLTPNLPELELLAGKQLRTTELVREAAEDLARHYGCDVLAKGG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCC HTADERIIDVLVPVGGRMAQFDDARIDTRHTHGTGCTLSSAIATLLGHGQPMEHAVRLAR CCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH RFVREAIENAPGFGDGAGPLGHQAVRLKS HHHHHHHHCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA