Click here to switch to the map view.

The map label for this gene is 85374819

Identifier: 85374819

GI number: 85374819

Start: 2021747

End: 2023279

Strand: Reverse

Name: 85374819

Synonym: ELI_09960

Alternate gene names: NA

Gene position: 2023279-2021747 (Counterclockwise)

Preceding gene: 85374820

Following gene: 85374818

Centisome position: 66.28

GC content: 66.08

Gene sequence:

>1533_bases
ATGATCGTCGAGCCGGATGCGCCGCTGCCAGAGCGCGTAGAAACGCTTGTTATCGGCGCGGGGACGATCGGTTTGCCGCT
GGCGGTGAAGCTGGCGGAAACGACCGGAAAGCCGGTGCTGTGCCTTGATTCGGGCGGGTGGTCGCAGGCTGGCGACACCC
ATCCCCTGAATGCTGTCGAGCAGCGCGGAGACAGATACGATGGGGCCGATCTGGGCCGCTTTCGCGGGCTCGGCGGCACC
TCGACCCGCTGGGGCGGGGCTTTGATCCCGTTCCAGCCTGCCGATATGACCGGGTGGCCGGTATCGTCGGAAGAGCTTGC
GCCTTTCATCGGCGAGGTCGAACAGCTCTTCGGCCTCGATCCAGGTACGTACCACGGAAGTGATCCGATGCTGGACGGGC
CGGACATGGTACCGCGCCTCGCGAAATGGCCGCCCTTCGCCAAGCGCAACGTGTGGAAATTGCTCGAAGGCGAGGTGCGC
CGGAGCGACACGTGCAGCGTCGCGCTGGAAAATGTCGTCACCAATCTTGCGTCGGAGGCTGATGCGATCCGCGTAGAGAT
TGCGAGACCAAATGCGTGGCATGTGATCCACGCTTCGAAGGTCATCATCGCAGCGGGCGCAATCGAGACGACGCGGCTGG
CCCTCCTGCTCGACCGCGCCATGGACGGCGCGGTCTCCAGGATGTCGCCGCTGCTCGGGCGAACCTTCGGTGACCATCTG
TCGGTCGAGGTCGGGCGCATAGTGCCGCGTGATCGCGTGGCGCTGAACCGCCTTTTCGGCTTCCGCTTCGCCCGGTCGGG
GATGATGCGCAACCTGCGTTTCGAATTGGCGCCGGAGACGCCGCTTCGCGAGACCGTGCGGCCCGGCTTCGTTCACGTTG
GCTATGCGACCGACGGCGACACAGGGTTCGACCACTTGCGCGCCGCCATGCAGGCCGTGCAGCGCGGCACCATGCCATCC
GGCGGCGCAGTCGCGGGCCTTTTGCGCGACCTGCCGTGGTTGGCGCGCGCTGTGAAATGGCGGTTTGCCGACAAACGCCA
GCTTTTCCCGGACGGCGCAGACCTCGTCGTGCATTGCGTGATCGAGCAAGGGCATGAGCGCGACAGCCGGATCACGCTCA
GCGACACGCTATCCGACGCACATGGCACGCCTCTCCCTGCCATCGACTGGACGGTGACGCCCGCCGATGTGGAGCAACTG
CACGCACTTGCCGATATTTTCGAACGGCACTGGGACCGAGGCGAGCTGGCCGGTCTCGGCACATTCGAGCGTTTCCCGCG
TGCCGGTGTCGAGCAGGCCCTCGTGCATTCGGGCGGCATCTACCATCCGACCGGATCGACGCGCATGGCCGCGAGTGCTG
CCGATGGCGTGGTCGATGCCGACCTGCGCCTGTTTGCAGAGCCGCGCGTACAACTGGTCGGCACCTCGGTACTACCATCA
GGCGGGGGAGCAAATCCGACCATGACGGCGCTGCTGCTTGCCATGCGGCTGGCGGCACAGCATGGTCGCGCCTCGCGGCG
GCAAGGCCGATAG

Upstream 100 bases:

>100_bases
TCGCCAAGGCGCTCGAACGCAACCGGACCGGTGCGGTTATCGTCAGCACCACCAGGCGCGAACGCCTCGCGCAATACGCC
CCGATCGCCGAGCCAGCGGG

Downstream 100 bases:

>100_bases
CGAGAGACGAGACGCCAGGTGGACTATTCAAGCAGCTGGATCATGCGGGTGCGCCGGATCGGCCAGCGGCTCGGCATATT
GCGGCCGCTGCAGCGGGCCT

Product: oxidoreductase, putative

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase; NAD-Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MIVEPDAPLPERVETLVIGAGTIGLPLAVKLAETTGKPVLCLDSGGWSQAGDTHPLNAVEQRGDRYDGADLGRFRGLGGT
STRWGGALIPFQPADMTGWPVSSEELAPFIGEVEQLFGLDPGTYHGSDPMLDGPDMVPRLAKWPPFAKRNVWKLLEGEVR
RSDTCSVALENVVTNLASEADAIRVEIARPNAWHVIHASKVIIAAGAIETTRLALLLDRAMDGAVSRMSPLLGRTFGDHL
SVEVGRIVPRDRVALNRLFGFRFARSGMMRNLRFELAPETPLRETVRPGFVHVGYATDGDTGFDHLRAAMQAVQRGTMPS
GGAVAGLLRDLPWLARAVKWRFADKRQLFPDGADLVVHCVIEQGHERDSRITLSDTLSDAHGTPLPAIDWTVTPADVEQL
HALADIFERHWDRGELAGLGTFERFPRAGVEQALVHSGGIYHPTGSTRMAASAADGVVDADLRLFAEPRVQLVGTSVLPS
GGGANPTMTALLLAMRLAAQHGRASRRQGR

Sequences:

>Translated_510_residues
MIVEPDAPLPERVETLVIGAGTIGLPLAVKLAETTGKPVLCLDSGGWSQAGDTHPLNAVEQRGDRYDGADLGRFRGLGGT
STRWGGALIPFQPADMTGWPVSSEELAPFIGEVEQLFGLDPGTYHGSDPMLDGPDMVPRLAKWPPFAKRNVWKLLEGEVR
RSDTCSVALENVVTNLASEADAIRVEIARPNAWHVIHASKVIIAAGAIETTRLALLLDRAMDGAVSRMSPLLGRTFGDHL
SVEVGRIVPRDRVALNRLFGFRFARSGMMRNLRFELAPETPLRETVRPGFVHVGYATDGDTGFDHLRAAMQAVQRGTMPS
GGAVAGLLRDLPWLARAVKWRFADKRQLFPDGADLVVHCVIEQGHERDSRITLSDTLSDAHGTPLPAIDWTVTPADVEQL
HALADIFERHWDRGELAGLGTFERFPRAGVEQALVHSGGIYHPTGSTRMAASAADGVVDADLRLFAEPRVQLVGTSVLPS
GGGANPTMTALLLAMRLAAQHGRASRRQGR
>Mature_510_residues
MIVEPDAPLPERVETLVIGAGTIGLPLAVKLAETTGKPVLCLDSGGWSQAGDTHPLNAVEQRGDRYDGADLGRFRGLGGT
STRWGGALIPFQPADMTGWPVSSEELAPFIGEVEQLFGLDPGTYHGSDPMLDGPDMVPRLAKWPPFAKRNVWKLLEGEVR
RSDTCSVALENVVTNLASEADAIRVEIARPNAWHVIHASKVIIAAGAIETTRLALLLDRAMDGAVSRMSPLLGRTFGDHL
SVEVGRIVPRDRVALNRLFGFRFARSGMMRNLRFELAPETPLRETVRPGFVHVGYATDGDTGFDHLRAAMQAVQRGTMPS
GGAVAGLLRDLPWLARAVKWRFADKRQLFPDGADLVVHCVIEQGHERDSRITLSDTLSDAHGTPLPAIDWTVTPADVEQL
HALADIFERHWDRGELAGLGTFERFPRAGVEQALVHSGGIYHPTGSTRMAASAADGVVDADLRLFAEPRVQLVGTSVLPS
GGGANPTMTALLLAMRLAAQHGRASRRQGR

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55086; Mature: 55086

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVEPDAPLPERVETLVIGAGTIGLPLAVKLAETTGKPVLCLDSGGWSQAGDTHPLNAVE
CCCCCCCCCHHHHHEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHH
QRGDRYDGADLGRFRGLGGTSTRWGGALIPFQPADMTGWPVSSEELAPFIGEVEQLFGLD
HCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PGTYHGSDPMLDGPDMVPRLAKWPPFAKRNVWKLLEGEVRRSDTCSVALENVVTNLASEA
CCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
DAIRVEIARPNAWHVIHASKVIIAAGAIETTRLALLLDRAMDGAVSRMSPLLGRTFGDHL
CEEEEEEECCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SVEVGRIVPRDRVALNRLFGFRFARSGMMRNLRFELAPETPLRETVRPGFVHVGYATDGD
EEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCEEEEEECCCCC
TGFDHLRAAMQAVQRGTMPSGGAVAGLLRDLPWLARAVKWRFADKRQLFPDGADLVVHCV
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHH
IEQGHERDSRITLSDTLSDAHGTPLPAIDWTVTPADVEQLHALADIFERHWDRGELAGLG
HHCCCCCCCEEEEHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCC
TFERFPRAGVEQALVHSGGIYHPTGSTRMAASAADGVVDADLRLFAEPRVQLVGTSVLPS
CHHHCCCCCHHHHHHHCCCEECCCCCCCCHHHHCCCCCCCCHHHHCCCCEEEEECEECCC
GGGANPTMTALLLAMRLAAQHGRASRRQGR
CCCCCHHHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MIVEPDAPLPERVETLVIGAGTIGLPLAVKLAETTGKPVLCLDSGGWSQAGDTHPLNAVE
CCCCCCCCCHHHHHEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHH
QRGDRYDGADLGRFRGLGGTSTRWGGALIPFQPADMTGWPVSSEELAPFIGEVEQLFGLD
HCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PGTYHGSDPMLDGPDMVPRLAKWPPFAKRNVWKLLEGEVRRSDTCSVALENVVTNLASEA
CCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
DAIRVEIARPNAWHVIHASKVIIAAGAIETTRLALLLDRAMDGAVSRMSPLLGRTFGDHL
CEEEEEEECCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SVEVGRIVPRDRVALNRLFGFRFARSGMMRNLRFELAPETPLRETVRPGFVHVGYATDGD
EEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCEEEEEECCCCC
TGFDHLRAAMQAVQRGTMPSGGAVAGLLRDLPWLARAVKWRFADKRQLFPDGADLVVHCV
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHH
IEQGHERDSRITLSDTLSDAHGTPLPAIDWTVTPADVEQLHALADIFERHWDRGELAGLG
HHCCCCCCCEEEEHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCC
TFERFPRAGVEQALVHSGGIYHPTGSTRMAASAADGVVDADLRLFAEPRVQLVGTSVLPS
CHHHCCCCCHHHHHHHCCCEECCCCCCCCHHHHCCCCCCCCHHHHCCCCEEEEECEECCC
GGGANPTMTALLLAMRLAAQHGRASRRQGR
CCCCCHHHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA