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The map label for this gene is ydiI [C]

Identifier: 85374794

GI number: 85374794

Start: 1994886

End: 1995332

Strand: Reverse

Name: ydiI [C]

Synonym: ELI_09835

Alternate gene names: 85374794

Gene position: 1995332-1994886 (Counterclockwise)

Preceding gene: 85374796

Following gene: 85374789

Centisome position: 65.37

GC content: 63.53

Gene sequence:

>447_bases
ATGAACAATGACATCATCTGGTGGGGCGGCACGCTGCCGCGCTTGGCGGACCTCGGCTCGGGCGGCGACGATTGTATGCC
CGGCCATCTGGGGATCGAGTTCGTCGAGGTTTCGAGCGATACGATCACCGCGCGCATGCCGGTCGATCGGCGGACCAAAC
AGCCTTATGGCCGGTTGCACGGCGGCGCTTCGGTCGCGCTGGCGGAGACGGTCGGCTCTGTCGCCGCCTCGCTCACCGTC
GATCGCGCAAAATTCGCCACTGTCGGGATGGAGATCAACGCCAACCACGTGCGCCCGGCCTATGACCAATATGTCTATGC
CACCGCCAGCCCGGTGAACATCGGCCGCACCACGCAGATCTGGCAGATCCGCATCGTCAACGAACAGGGCAAGCTGGTGT
GCATTTCCCGCCTGACGATGGCGGTGATTGCCATCGAGCAGAAGTAG

Upstream 100 bases:

>100_bases
GTACAAACATGGCAGGAAATCGTAAGCATTCGGTAACCATGATGTATCGTGTAGTAATCCGGCGATAGACAGCGACCGGT
GACCGGGCCAAGAGGGCCGC

Downstream 100 bases:

>100_bases
GGCTCAGGCCGGCTCCACCGCTCGCAGTTCGACGGGCAGGGCATGGCCTTGCGCCGCCGCGCGCTTGGCCCCGGCCTTCA
GTTCCTTCGCCAGATCGCGG

Product: phenylacetic acid degradation-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MNNDIIWWGGTLPRLADLGSGGDDCMPGHLGIEFVEVSSDTITARMPVDRRTKQPYGRLHGGASVALAETVGSVAASLTV
DRAKFATVGMEINANHVRPAYDQYVYATASPVNIGRTTQIWQIRIVNEQGKLVCISRLTMAVIAIEQK

Sequences:

>Translated_148_residues
MNNDIIWWGGTLPRLADLGSGGDDCMPGHLGIEFVEVSSDTITARMPVDRRTKQPYGRLHGGASVALAETVGSVAASLTV
DRAKFATVGMEINANHVRPAYDQYVYATASPVNIGRTTQIWQIRIVNEQGKLVCISRLTMAVIAIEQK
>Mature_148_residues
MNNDIIWWGGTLPRLADLGSGGDDCMPGHLGIEFVEVSSDTITARMPVDRRTKQPYGRLHGGASVALAETVGSVAASLTV
DRAKFATVGMEINANHVRPAYDQYVYATASPVNIGRTTQIWQIRIVNEQGKLVCISRLTMAVIAIEQK

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=129, Percent_Identity=49.6124031007752, Blast_Score=128, Evalue=2e-31,
Organism=Escherichia coli, GI1786813, Length=130, Percent_Identity=43.8461538461538, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16042; Mature: 16042

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDIIWWGGTLPRLADLGSGGDDCMPGHLGIEFVEVSSDTITARMPVDRRTKQPYGRLH
CCCCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCC
GGASVALAETVGSVAASLTVDRAKFATVGMEINANHVRPAYDQYVYATASPVNIGRTTQI
CCCEEEHHHHHHHHHHHEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEE
WQIRIVNEQGKLVCISRLTMAVIAIEQK
EEEEEECCCCCEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MNNDIIWWGGTLPRLADLGSGGDDCMPGHLGIEFVEVSSDTITARMPVDRRTKQPYGRLH
CCCCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCC
GGASVALAETVGSVAASLTVDRAKFATVGMEINANHVRPAYDQYVYATASPVNIGRTTQI
CCCEEEHHHHHHHHHHHEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEE
WQIRIVNEQGKLVCISRLTMAVIAIEQK
EEEEEECCCCCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]