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The map label for this gene is cspG [C]

Identifier: 85374781

GI number: 85374781

Start: 1983519

End: 1983731

Strand: Reverse

Name: cspG [C]

Synonym: ELI_09770

Alternate gene names: 85374781

Gene position: 1983731-1983519 (Counterclockwise)

Preceding gene: 85374785

Following gene: 85374780

Centisome position: 64.99

GC content: 59.62

Gene sequence:

>213_bases
ATGGCCAAGACTGGCACCGTAAAATTTTTCAACGAAGACAAGGGCTATGGCTTCATCCAGCCCGACGACGGCTCGGCCGA
CAGCTTCGTGCATATCTCTGCCGTCCAGGCAGCCGGCATGCAGACGCTCGATAAGGAGCAGCGGCTCAACTACGACGTCG
AACAGGGCCGCAACGGCAAGGAAAGCGCCGTCAACCTGAGCGCTGCCGACTGA

Upstream 100 bases:

>100_bases
AAACCAGGCGACGATTTCCCTTTCATTTGAACGATTAGACGCACGACTGCTCCGCATGTTGCGGCGCGGCAACCAACACG
TTCTCGAAAGGAACATCATC

Downstream 100 bases:

>100_bases
TCGTCCGCAATCGCTAGACACGCCCCCGGCCGGCGCGGTTTTGCCGCCTCGGCCGGGGGATCATTCCTCCAGCGGAGCGC
CATGCCGATGCACCAGTCCT

Product: cold shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MAKTGTVKFFNEDKGYGFIQPDDGSADSFVHISAVQAAGMQTLDKEQRLNYDVEQGRNGKESAVNLSAAD

Sequences:

>Translated_70_residues
MAKTGTVKFFNEDKGYGFIQPDDGSADSFVHISAVQAAGMQTLDKEQRLNYDVEQGRNGKESAVNLSAAD
>Mature_69_residues
AKTGTVKFFNEDKGYGFIQPDDGSADSFVHISAVQAAGMQTLDKEQRLNYDVEQGRNGKESAVNLSAAD

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI2367114, Length=60, Percent_Identity=51.6666666666667, Blast_Score=74, Evalue=1e-15,
Organism=Escherichia coli, GI1789979, Length=56, Percent_Identity=55.3571428571429, Blast_Score=72, Evalue=7e-15,
Organism=Escherichia coli, GI1786841, Length=64, Percent_Identity=51.5625, Blast_Score=70, Evalue=2e-14,
Organism=Escherichia coli, GI1788126, Length=69, Percent_Identity=50.7246376811594, Blast_Score=70, Evalue=3e-14,
Organism=Escherichia coli, GI1787834, Length=65, Percent_Identity=47.6923076923077, Blast_Score=66, Evalue=4e-13,
Organism=Escherichia coli, GI1787839, Length=60, Percent_Identity=50, Blast_Score=66, Evalue=5e-13,
Organism=Escherichia coli, GI1787107, Length=60, Percent_Identity=46.6666666666667, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7570; Mature: 7439

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTGTVKFFNEDKGYGFIQPDDGSADSFVHISAVQAAGMQTLDKEQRLNYDVEQGRNGK
CCCCCCEEEEECCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCHHCCCCCC
ESAVNLSAAD
CCEEEEEECC
>Mature Secondary Structure 
AKTGTVKFFNEDKGYGFIQPDDGSADSFVHISAVQAAGMQTLDKEQRLNYDVEQGRNGK
CCCCCEEEEECCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCHHCCCCCC
ESAVNLSAAD
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]