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The map label for this gene is ybgC [C]

Identifier: 85374734

GI number: 85374734

Start: 1946741

End: 1947211

Strand: Reverse

Name: ybgC [C]

Synonym: ELI_09535

Alternate gene names: 85374734

Gene position: 1947211-1946741 (Counterclockwise)

Preceding gene: 85374735

Following gene: 85374733

Centisome position: 63.79

GC content: 65.39

Gene sequence:

>471_bases
ATGGCGACCACCCCCAACCCGCACCCGAACCCTCCCGGCGGTGTCTTCGACGGCCCGGTGCACCTCTATGCGGTGCGGGT
CTATTACGAGGATACGGACCTGTCCGGCATCACCTATCACGCCAATTACCTGCGCTGGTTCGAGCGCGCGCGATCGGACA
TCCTGCGCTTGCTCGGTATCGATCAGCGCGCCGCGATCGAAGCGGGGGAGGGCGCCTACGCCGTCGCCGATCTCACGCTC
AAATATTTTCGCCCGGCCAGGCTCGACGACGACGTCGTCATTCAGACGAGGTGCACCCAGCTCAAAGCAGCCAGCGTCAC
CATGCACCAGCGCGCCTATCGCGGAGACGAATTGCTGACCGAAGCGAGCTTTCGCGTCGGCTTCGTCGCGCCCGACGGCC
GTCCGCGGCGCCAGCCCGAGGCTTGGCGCGAAGCTTTCCAACCCGTTCTCAGCGAGGTTCCCACCGAATGA

Upstream 100 bases:

>100_bases
GGGCTGGTTCTTAAATCGGCCGGTTCGTCGCATAGCCGAGTCGCTTCGTCGTTCTCGCTTGCTAGGCGACTCACGCCTCC
GCTAAAGCGCGCAACGACCT

Downstream 100 bases:

>100_bases
GTGCTTTCCCCGTCACCATGGCCACCGGCGAAGCGACCGGGCGGCTCGATCCGCTACAGCTGTTCCTCGATGCCGATATC
GTGGTGCAGGCGGTGATGAT

Product: thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MATTPNPHPNPPGGVFDGPVHLYAVRVYYEDTDLSGITYHANYLRWFERARSDILRLLGIDQRAAIEAGEGAYAVADLTL
KYFRPARLDDDVVIQTRCTQLKAASVTMHQRAYRGDELLTEASFRVGFVAPDGRPRRQPEAWREAFQPVLSEVPTE

Sequences:

>Translated_156_residues
MATTPNPHPNPPGGVFDGPVHLYAVRVYYEDTDLSGITYHANYLRWFERARSDILRLLGIDQRAAIEAGEGAYAVADLTL
KYFRPARLDDDVVIQTRCTQLKAASVTMHQRAYRGDELLTEASFRVGFVAPDGRPRRQPEAWREAFQPVLSEVPTE
>Mature_155_residues
ATTPNPHPNPPGGVFDGPVHLYAVRVYYEDTDLSGITYHANYLRWFERARSDILRLLGIDQRAAIEAGEGAYAVADLTLK
YFRPARLDDDVVIQTRCTQLKAASVTMHQRAYRGDELLTEASFRVGFVAPDGRPRRQPEAWREAFQPVLSEVPTE

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=125, Percent_Identity=40.8, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17605; Mature: 17474

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTPNPHPNPPGGVFDGPVHLYAVRVYYEDTDLSGITYHANYLRWFERARSDILRLLGI
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
DQRAAIEAGEGAYAVADLTLKYFRPARLDDDVVIQTRCTQLKAASVTMHQRAYRGDELLT
CCHHHEECCCCCEEHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHH
EASFRVGFVAPDGRPRRQPEAWREAFQPVLSEVPTE
HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATTPNPHPNPPGGVFDGPVHLYAVRVYYEDTDLSGITYHANYLRWFERARSDILRLLGI
CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
DQRAAIEAGEGAYAVADLTLKYFRPARLDDDVVIQTRCTQLKAASVTMHQRAYRGDELLT
CCHHHEECCCCCEEHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHH
EASFRVGFVAPDGRPRRQPEAWREAFQPVLSEVPTE
HCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]